Single-cell atlas of the equine placenta reveals cellular heterogeneity and gestational-stage-associated programs.
Abstract: The placenta mediates critical interactions between mother and offspring that guide development and impact long-term health. Despite its importance, the cellular organization of the equine (Equus caballus) placenta remains poorly defined. The equine epitheliochorial placenta, characterized by the absence of trophoblast invasion and prominent endocrine activity, provides a unique comparative model for studying placental cellular composition and development. Methods: We applied single-cell RNA sequencing to chorioallantois tissue collected from first-trimester (n = 1) and term (n = 2) equine placentas to generate a comprehensive cellular atlas across gestation. Results: We identified four major fetal cell lineages: trophoblast, stromal, endothelial, and Hofbauer-like cells. Subclustering revealed ten transcriptionally distinct cell populations, highlighting previously unrecognized heterogeneity within trophoblast, stromal, and Hofbauer-like cells. Comparative analyses between first-trimester and term placentas demonstrated marked gestational-stage-associated differences in cellular composition and gene expression programs. The early-stage placenta was dominated by shared transcriptional signatures associated with growth, extracellular matrix organization, and cell cycle activity, whereas term placentas exhibited increased immune-related and tissue remodeling pathways and greater cell type-specific specialization. Conclusions: Together, this study provides the first high-resolution single-cell transcriptomic atlas of the equine placenta, offering fundamental insights into placental cellular diversity and developmental dynamics. This resource establishes a foundation for comparative placental biology and for investigating equine gestational disorders.
Copyright © 2026. Published by Elsevier Ltd.
Publication Date: 2026-02-07 PubMed ID: 41666507DOI: 10.1016/j.placenta.2026.02.004Google Scholar: Lookup
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Summary
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Overview
- This study used single-cell RNA sequencing to map the cellular composition of the horse placenta at different stages of pregnancy, revealing diverse cell types and how their roles and gene activity change from early to late gestation.
Introduction to the Research
- The placenta is a vital organ that supports fetal development by facilitating nutrient, gas, and waste exchange between mother and fetus.
- It also influences long-term health outcomes for the offspring.
- In horses (Equus caballus), the placenta has a unique structure called the epitheliochorial placenta, characterized by:
- No invasion of maternal tissue by fetal trophoblast cells, unlike in humans or mice.
- Strong endocrine (hormonal) activity.
- Despite its biological importance, the detailed cellular organization of the equine placenta was not well understood prior to this study.
Methods
- The researchers collected placental tissue known as chorioallantois from horses at two gestational stages:
- First trimester (early pregnancy) – sample size of 1.
- Term (full-term pregnancy) – sample size of 2.
- Single-cell RNA sequencing (scRNA-seq) was employed to analyze gene expression in individual cells.
- This approach enables identification and classification of distinct cell types based on their unique gene expression profiles.
Results: Identification of Cell Types
- Four major fetal cell lineages were identified in the equine placenta:
- Trophoblast cells: These form the outer layer of the placenta and are involved in nutrient and gas exchange.
- Stromal cells: Connective tissue cells that provide support and structure.
- Endothelial cells: Cells forming blood vessels.
- Hofbauer-like cells: A type of macrophage or immune cell within the placenta.
- Further subclustering revealed 10 distinct transcriptionally defined populations, indicating that these broad categories contain multiple distinct cell subtypes.
- This uncovered previously unrecognized heterogeneity within trophoblast, stromal, and Hofbauer-like cells, suggesting complex cellular specialization.
Results: Gestational Stage Differences
- Comparing early (first-trimester) versus term placentas, the study found significant differences in cellular makeup and gene expression programs:
- Early-stage placenta:
- Dominated by gene signatures related to cell growth, division (cell cycle activity), and organization of the extracellular matrix (the structural scaffold around cells).
- This reflects active tissue formation and placental growth during early development.
- Term placenta:
- Showed increased activity in immune-related pathways and tissue remodeling, indicative of placental maturation and adaptation to support late fetal development.
- Displayed more specialized expression patterns unique to particular cell types as the placenta finalizes its structure and function.
Conclusions and Significance
- This study represents the first high-resolution single-cell transcriptome atlas of the equine placenta, providing detailed insights into its cellular complexity and developmental changes across pregnancy.
- The atlas serves as a valuable resource for:
- Comparative placental biology research, helping scientists understand similarities and differences across species.
- Studying equine pregnancy and gestational disorders, potentially aiding veterinary medicine and horse breeding.
- Overall, the research advances understanding of how the unique features of the horse placenta develop and function at a cellular level.
Cite This Article
APA
Verstraete MH, Norris JK, Loux SC, De Spiegelaere W, Carossino M, Daels P, Dini P.
(2026).
Single-cell atlas of the equine placenta reveals cellular heterogeneity and gestational-stage-associated programs.
Placenta, 176, 13-21.
https://doi.org/10.1016/j.placenta.2026.02.004 Publication
Researcher Affiliations
- Department of Population Health and Reproduction, School of Veterinary Medicine, University of California Davis, Davis, CA, USA; Department of Morphology, Imaging, Orthopedics, Rehabilitation and Nutrition, Faculty of Veterinary Medicine, Ghent University, Merelbeke, Belgium.
- Department of Population Health and Reproduction, School of Veterinary Medicine, University of California Davis, Davis, CA, USA.
- Department of Animal Sciences, College of Agriculture, Louisiana State University, Baton Rouge, LA, USA; Department of Veterinary Sciences, University of Kentucky, Lexington, KY, USA.
- Department of Morphology, Imaging, Orthopedics, Rehabilitation and Nutrition, Faculty of Veterinary Medicine, Ghent University, Merelbeke, Belgium.
- Department of Pathobiological Sciences & Louisiana Animal Disease Diagnostic Laboratory, Louisiana State University, Baton Rouge, LA, USA.
- Department of Morphology, Imaging, Orthopedics, Rehabilitation and Nutrition, Faculty of Veterinary Medicine, Ghent University, Merelbeke, Belgium.
- Department of Population Health and Reproduction, School of Veterinary Medicine, University of California Davis, Davis, CA, USA. Electronic address: pdini@ucdavis.edu.
MeSH Terms
- Animals
- Female
- Pregnancy
- Horses
- Placenta / cytology
- Placenta / metabolism
- Single-Cell Analysis
- Transcriptome
Conflict of Interest Statement
Declaration of competing interest The authors have no conflicts of interest to declare.
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