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Anaerobe2026; 97; 103028; doi: 10.1016/j.anaerobe.2026.103028

Clostridioides difficile infection in animals: a literature review.

Abstract: Clostridioides difficile affects humans, and several other animal species, such as horses, pigs, gerbils, guinea pigs, hamsters, and rabbits. This microorganism has also been isolated from the gastrointestinal tract of healthy individuals of a wide variety of animal species in which its association with disease is not known. Traditionally, in most domestic animal species, C. difficile-infection disease (CDI) was antibiotic-associated, although in the past few years more cases in which no antibiotic association was known have been described. In addition, no antibiotic association has been described in pigs. In most animals CDI is not age-associated, although in pigs, the disease is seen almost exclusively in neonatal animals. In horses CDI is highly prevalent, and suggested predisposing factors, in addition to antibiotic treatment and hospitalization, include co-infections with other bacteria or parasites, intestinal displacements, transportation, surgical or medical treatment and nasogastric intubation. Although in recent years a substantial amount of evidence has been provided suggesting that CDI is a zoonosis, definitive evidence in this regard is lacking.
Publication Date: 2026-01-28 PubMed ID: 41616981DOI: 10.1016/j.anaerobe.2026.103028Google Scholar: Lookup
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  • Journal Article
  • Review

Summary

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Overview

  • This literature review examines the occurrence and characteristics of Clostridioides difficile infection (CDI) in various animal species, detailing differences in disease associations, prevalence, and potential zoonotic implications.

Introduction to Clostridioides difficile in Animals

  • Clostridioides difficile (C. difficile) is a microorganism known to affect humans and multiple animal species.
  • Species commonly affected include horses, pigs, gerbils, guinea pigs, hamsters, and rabbits.
  • C. difficile has also been found in the gastrointestinal tracts of healthy animals where its link to disease is unclear.

Infection Characteristics Across Species

  • Traditionally, CDI in domestic animals has been associated with antibiotic use, reflecting similar patterns seen in humans.
  • Recent cases have been reported where CDI occurred without prior antibiotic treatment, particularly noteworthy in pigs where no antibiotic association is observed.
  • Age association with CDI varies by species:
    • In most animals, CDI is not linked to a specific age group.
    • In pigs, CDI primarily affects neonatal animals, suggesting age-specific vulnerability.

Prevalence and Risk Factors in Horses

  • Horses show a high prevalence of CDI compared to other animal species.
  • Predisposing factors beyond antibiotic use and hospitalization include:
    • Co-infections with other bacteria or parasites
    • Intestinal displacements
    • Transportation stress
    • Surgical or medical interventions
    • Nasogastric intubation

Zoonotic Potential of CDI

  • Recent research provides substantial evidence suggesting that CDI may be zoonotic, meaning it could be transmitted from animals to humans.
  • Despite these indications, definitive proof confirming zoonotic transmission pathways remains lacking.

Summary

  • The review highlights:
    • Species-specific differences in CDI epidemiology and pathogenesis
    • The evolving understanding of CDI beyond antibiotic-associated cases
    • The complex interplay of risk factors, especially in horses
    • The ongoing investigation into CDI’s zoonotic role

Cite This Article

APA
Uzal FA, Navarro MA, Asin J, Henderson E. (2026). Clostridioides difficile infection in animals: a literature review. Anaerobe, 97, 103028. https://doi.org/10.1016/j.anaerobe.2026.103028

Publication

ISSN: 1095-8274
NlmUniqueID: 9505216
Country: England
Language: English
Volume: 97
Pages: 103028
PII: S1075-9964(26)00008-9

Researcher Affiliations

Uzal, Francisco A
  • California Animal Health and Food Safety Laboratory-San Bernardino Branch, School of Veterinary Medicine, University of California-Davis, 105 W Central Ave, San Bernardino, CA, USA. Electronic address: fauzal@ucdavis.edu.
Navarro, Mauricio A
  • California Animal Health and Food Safety Laboratory-Turlock Branch, School of Veterinary Medicine, University of California-Davis, 1550 N Soderquist Rd, Turlock, CA, USA.
Asin, Javier
  • California Animal Health and Food Safety Laboratory-San Bernardino Branch, School of Veterinary Medicine, University of California-Davis, 105 W Central Ave, San Bernardino, CA, USA.
Henderson, Eileen
  • California Animal Health and Food Safety Laboratory-San Bernardino Branch, School of Veterinary Medicine, University of California-Davis, 105 W Central Ave, San Bernardino, CA, USA.

MeSH Terms

  • Animals
  • Clostridioides difficile / isolation & purification
  • Clostridium Infections / veterinary
  • Clostridium Infections / microbiology
  • Clostridium Infections / epidemiology
  • Horses
  • Anti-Bacterial Agents / therapeutic use
  • Humans
  • Swine
  • Animal Diseases / microbiology
  • Animal Diseases / epidemiology
  • Guinea Pigs

Conflict of Interest Statement

Declaration of competing interest The four co-authors contributed equally to the conception, design and writing of this manuscript. Francisco Uzal was responsible for the figures. Francisco Uzal is an Associate Editor, and Mauricio Navarro is a member of the Editorial Board. Given their roles as Associate Editor and Editorial Board member, respectively, Francisco Uzal and Mauricio Navarro had no involvement in the peer review of this aricle and have no access to information regarding its peer review.

Citations

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