Diversity of CTX-M-positive Escherichia coli recovered from animals in Canada.
Abstract: Historically, extended-spectrum cephalosporin resistance in bacteria from animals in Canada has been attributed to the SHV and CMY β-lactamase families. This pattern is beginning to change with the emergence of the bla gene family among Escherichia coli recovered from various animal species. Here we analyze and compare whole genome sequences of bla-positive E. coli isolates (n = 173) from dogs, chicken, swine, horses and beef cattle in Canada. Ten bla variants were identified with bla and bla being identified in most animal species. These variants occurred across many sequence types, suggesting that mobile genetic elements mediate the spread of bla. The variants bla and bla are associated with the global spread of bla in human clinical isolates and their presence could be indicative of transfer between humans and animals. These variants were also the principal variants identified among sequence type 131 isolates, which were not associated with any other species than dogs. These isolates carried the same bla variants as E. coli isolates found in humans. Close contact may promote the transmission of these isolates between humans and companion animals.
Copyright © 2019 The Authors. Published by Elsevier B.V. All rights reserved.
Publication Date: 2019-02-23 PubMed ID: 30955827DOI: 10.1016/j.vetmic.2019.02.031Google Scholar: Lookup
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- Journal Article
Summary
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The study analyzes the emerging pattern of resistance in Escherichia coli bacteria, particularly observed in animals across Canada, where a shift is seen from the SHV and CMY β-lactamase families to the bla gene family. The research presents findings based on whole genome sequencing of bla-positive E. coli isolates across various animals.
Introduction and Background
- The study investigates the rise in resistance in E. coli isolates, identified in a variety of animals in Canada.
- Traditionally, the resistance in these bacteria was associated with the SHV and CMY β-lactamase families.
- However, recent trends show a shift towards the bla gene family acting as a source of this resistance.
Methodology
- The researchers used whole genome sequencing to investigate E. coli isolates from different animals including dogs, chicken, swine, horses, and beef cattle.
- A total of 173 bla-positive E. coli isolates were studied.
Findings
- Across the isolates, ten bla variants were identified, with bla and bla occurring in most animal species.
- The various bla variants were found across many sequence types, suggesting that mobile genetic elements help in the spread of bla.
- Two variants, bla and bla have associations with the worldwide spread of bla in human clinical isolates.
- The presence of bla and bla could indicate transfer between humans and animals.
Significant Conclusions
- The principal variants of bla and bla were mainly found in isolates corresponding to sequence type 131, which were only found in dogs.
- These particular isolates carried the same bla variants as E. coli isolates found in humans, indicating a potential transmission between humans and companion animals, especially dogs.
- The study concludes that close contact may promote the transmission of these variants between humans and companion animals.
Cite This Article
APA
Cormier A, Zhang PLC, Chalmers G, Weese JS, Deckert A, Mulvey M, McAllister T, Boerlin P.
(2019).
Diversity of CTX-M-positive Escherichia coli recovered from animals in Canada.
Vet Microbiol, 231, 71-75.
https://doi.org/10.1016/j.vetmic.2019.02.031 Publication
Researcher Affiliations
- Department of Pathobiology, University of Guelph, 50 Stone Road East, Guelph, Ontario, N1G 2W1, Canada.
- Department of Pathobiology, University of Guelph, 50 Stone Road East, Guelph, Ontario, N1G 2W1, Canada.
- Department of Pathobiology, University of Guelph, 50 Stone Road East, Guelph, Ontario, N1G 2W1, Canada.
- Department of Pathobiology, University of Guelph, 50 Stone Road East, Guelph, Ontario, N1G 2W1, Canada.
- Centre for Foodborne, Environmental and Zoonotic Infectious Diseases, Public Health Agency of Canada, 160 Research Lane - 103, Guelph, Ontario, N1G 5B2, Canada.
- National Microbiology Laboratory, Public Health Agency of Canada, 1015 Arlington Street, Winnipeg, Manitoba, R3E 3M4, Canada.
- Agriculture and Agri-food Canada, 5403-1 Avenue South, Lethbridge, Alberta, T1J 4B1, Canada.
- Department of Pathobiology, University of Guelph, 50 Stone Road East, Guelph, Ontario, N1G 2W1, Canada. Electronic address: pboerlin@uoguelph.ca.
MeSH Terms
- Animals
- Anti-Bacterial Agents / pharmacology
- Canada
- Cattle / microbiology
- Cephalosporin Resistance
- Chickens / microbiology
- Dogs / microbiology
- Escherichia coli / enzymology
- Escherichia coli / genetics
- Escherichia coli / isolation & purification
- Escherichia coli Infections / veterinary
- Escherichia coli Proteins / biosynthesis
- Genetic Variation
- Genome, Bacterial
- Horses / microbiology
- Humans
- Microbial Sensitivity Tests
- Plasmids
- Swine / microbiology
- Whole Genome Sequencing
- beta-Lactamases / biosynthesis
Citations
This article has been cited 27 times.- Amato HK, Loayza F, Salinas L, Paredes D, García D, Sarzosa S, Saraiva-Garcia C, Johnson TJ, Pickering AJ, Riley LW, Trueba G, Graham JP. Leveraging the COVID-19 pandemic as a natural experiment to assess changes in antibiotic use and antibiotic-resistant E. coli carriage in semi-rural Ecuador.. Sci Rep 2023 Sep 8;13(1):14854.
- Chalmers G, Anderson REV, Murray R, Topp E, Boerlin P. Characterization of Proteus mirabilis and associated plasmids isolated from anaerobic dairy cattle manure digesters.. PLoS One 2023;18(8):e0289703.
- Dalazen G, Fuentes-Castillo D, Pedroso LG, Fontana H, Sano E, Cardoso B, Esposito F, Moura Q, Matinata BS, Silveira LF, Mohsin M, Matushima ER, Lincopan N. CTX-M-producing Escherichia coli ST602 carrying a wide resistome in South American wild birds: Another pandemic clone of One Health concern.. One Health 2023 Dec;17:100586.
- Ribeiro J, Silva V, Monteiro A, Vieira-Pinto M, Igrejas G, Reis FS, Barros L, Poeta P. Antibiotic Resistance among Gastrointestinal Bacteria in Broilers: A Review Focused on Enterococcus spp. and Escherichia coli.. Animals (Basel) 2023 Apr 15;13(8).
- Massé J, Vanier G, Fairbrother JM, de Lagarde M, Arsenault J, Francoz D, Dufour S, Archambault M. Description of Antimicrobial-Resistant Escherichia coli and Their Dissemination Mechanisms on Dairy Farms.. Vet Sci 2023 Mar 23;10(4).
- Prendergast DM, Slowey R, Burgess CM, Murphy D, Johnston D, Morris D, O' Doherty Á, Moriarty J, Gutierrez M. Characterization of cephalosporin and fluoroquinolone resistant Enterobacterales from Irish farm waste by whole genome sequencing.. Front Microbiol 2023;14:1118264.
- Anderson REV, Chalmers G, Murray R, Mataseje L, Pearl DL, Mulvey M, Topp E, Boerlin P. Characterization of Escherichia coli and Other Enterobacterales Resistant to Extended-Spectrum Cephalosporins Isolated from Dairy Manure in Ontario, Canada.. Appl Environ Microbiol 2023 Feb 28;89(2):e0186922.
- Belmahdi M, Chenouf NS, Ait Belkacem A, Martinez-Alvarez S, Pino-Hurtado MS, Benkhechiba Z, Lahrech S, Hakem A, Torres C. Extended Spectrum β-Lactamase-Producing Escherichia coli from Poultry and Wild Birds (Sparrow) in Djelfa (Algeria), with Frequent Detection of CTX-M-14 in Sparrow.. Antibiotics (Basel) 2022 Dec 14;11(12).
- Patricio TCDC, Farias BO, Santiago GS, Souza VRS, Pimenta RL, de Oliveira CC, Coelho IS, de Souza MMS, Coelho SMO. Production of extended-spectrum beta-lactamases in Escherichia coli isolated from poultry in Rio de Janeiro, Brazil.. Braz J Vet Med 2022;44:e001722.
- Zamudio R, Boerlin P, Beyrouthy R, Madec JY, Schwarz S, Mulvey MR, Zhanel GG, Cormier A, Chalmers G, Bonnet R, Haenni M, Eichhorn I, Kaspar H, Garcia-Fierro R, Wood JLN, Mather AE. Dynamics of extended-spectrum cephalosporin resistance genes in Escherichia coli from Europe and North America.. Nat Commun 2022 Dec 12;13(1):7490.
- Collis RM, Biggs PJ, Burgess SA, Midwinter AC, Brightwell G, Cookson AL. Prevalence and distribution of extended-spectrum β-lactamase and AmpC-producing Escherichia coli in two New Zealand dairy farm environments.. Front Microbiol 2022;13:960748.
- Nossair MA, Abd El Baqy FA, Rizk MSY, Elaadli H, Mansour AM, Abd El-Aziz AH, Alkhedaide A, Soliman MM, Ramadan H, Shukry M, Shaaban SI. Prevalence and Molecular Characterization of Extended-Spectrum β-Lactamases and AmpC β-lactamase-Producing Enterobacteriaceae among Human, Cattle, and Poultry.. Pathogens 2022 Jul 28;11(8).
- Soncini JGM, Cerdeira L, Sano E, Koga VL, Tizura AT, Tano ZN, Nakazato G, Kobayashi RKT, Aires CAM, Lincopan N, Vespero EC. Genomic insights of high-risk clones of ESBL-producing Escherichia coli isolated from community infections and commercial meat in southern Brazil.. Sci Rep 2022 Jun 7;12(1):9354.
- Li C, Wen R, Mu R, Chen X, Ma P, Gu K, Huang Z, Ju Z, Lei C, Tang Y, Wang H. Outer Membrane Vesicles of Avian PathogenicEscherichia coli Mediate the Horizontal Transmission of bla(CTX-M-55).. Pathogens 2022 Apr 18;11(4).
- Yoon S, Lee YJ. Molecular characteristics of ESBL-producing Escherichia coli isolated from chickens with colibacillosis.. J Vet Sci 2022 May;23(3):e37.
- Cormier AC, Chalmers G, Zamudio R, Mulvey MR, Mather AE, Boerlin P. Diversity of blaCTX-M-1-carrying plasmids recovered from Escherichia coli isolated from Canadian domestic animals.. PLoS One 2022;17(3):e0264439.
- Hata A, Fujitani N, Ono F, Yoshikawa Y. Surveillance of antimicrobial-resistant Escherichia coli in Sheltered dogs in the Kanto Region of Japan.. Sci Rep 2022 Jan 14;12(1):773.
- Nittayasut N, Yindee J, Boonkham P, Yata T, Suanpairintr N, Chanchaithong P. Multiple and High-Risk Clones of Extended-Spectrum Cephalosporin-Resistant and bla(NDM-5)-Harbouring Uropathogenic Escherichia coli from Cats and Dogs in Thailand.. Antibiotics (Basel) 2021 Nov 10;10(11).
- Massé J, Lardé H, Fairbrother JM, Roy JP, Francoz D, Dufour S, Archambault M. Prevalence of Antimicrobial Resistance and Characteristics of Escherichia coli Isolates From Fecal and Manure Pit Samples on Dairy Farms in the Province of Québec, Canada.. Front Vet Sci 2021;8:654125.
- Homeier-Bachmann T, Heiden SE, Lübcke PK, Bachmann L, Bohnert JA, Zimmermann D, Schaufler K. Antibiotic-Resistant Enterobacteriaceae in Wastewater of Abattoirs.. Antibiotics (Basel) 2021 May 12;10(5).
- Zhang Y, Sun YH, Wang JY, Chang MX, Zhao QY, Jiang HX. A Novel Structure Harboring bla(CTX-M-27) on IncF Plasmids in Escherichia coli Isolated from Swine in China.. Antibiotics (Basel) 2021 Apr 4;10(4).
- Kurittu P, Khakipoor B, Aarnio M, Nykäsenoja S, Brouwer M, Myllyniemi AL, Vatunen E, Heikinheimo A. Plasmid-Borne and Chromosomal ESBL/AmpC Genes in Escherichia coli and Klebsiella pneumoniae in Global Food Products.. Front Microbiol 2021;12:592291.
- Li D, Reid CJ, Kudinha T, Jarocki VM, Djordjevic SP. Genomic analysis of trimethoprim-resistant extraintestinal pathogenic Escherichia coli and recurrent urinary tract infections.. Microb Genom 2020 Dec;6(12).
- Chen JW, Huang HH, Chang SM, Scaria J, Chiu YL, Chen CM, Ko WC, Wang JL. Antibiotic-Resistant Escherichia coli and Sequence Type 131 in Fecal Colonization in Dogs in Taiwan.. Microorganisms 2020 Sep 20;8(9).
- Moffat J, Chalmers G, Reid-Smith R, Mulvey MR, Agunos A, Calvert J, Cormier A, Ricker N, Weese JS, Boerlin P. Resistance to extended-spectrum cephalosporins in Escherichia coli and other Enterobacterales from Canadian turkeys.. PLoS One 2020;15(9):e0236442.
- Adator EH, Walker M, Narvaez-Bravo C, Zaheer R, Goji N, Cook SR, Tymensen L, Hannon SJ, Church D, Booker CW, Amoako K, Nadon CA, Read R, McAllister TA. Whole Genome Sequencing Differentiates Presumptive Extended Spectrum Beta-Lactamase Producing Escherichia coli along Segments of the One Health Continuum.. Microorganisms 2020 Mar 22;8(3).
- Dantas Palmeira J, Ferreira HMN. Extended-spectrum beta-lactamase (ESBL)-producing Enterobacteriaceae in cattle production - a threat around the world.. Heliyon 2020 Jan;6(1):e03206.
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