Analyze Diet
Proceedings of the National Academy of Sciences of the United States of America2025; 122(26); e2413703122; doi: 10.1073/pnas.2413703122

EIAV encodes an accessory protein that antagonizes the host restriction factor equine tetherin.

Abstract: Equine infectious anemia virus (EIAV) is an important model for the study of pathogenesis in lentiviruses. Studies of viral genome organization and replication mechanisms are fundamental to the understanding of virus pathogenicity. In this study, we identified an unique transcript from EIAV in vivo and in vitro by Sanger sequencing and Northern blotting. The transcript contains a complete open reading frame and has length 369 nt. We named the protein encoded by this transcript S4 and demonstrated its expression in EIAV-infected cells. An S4-deficient EIAV infectious clone displayed obviously impaired virion release and attenuated virus replication in vitro, demonstrating that S4 plays a role in the release step of EIAV. The host restriction factor tetherin has broad-spectrum antiviral activity and prevents the release of a wide range of enveloped viruses, including lentiviruses. Here, we demonstrated that S4 enhances the release of the EIAV-like particle by counteracting the equine tetherin (eqTHN). S4 interacts with the eqTHN and sequesters it within intracellular membrane compartments, attenuating eqTHN expression on the cell surface and thereby disrupting its antiviral activity. Further investigation revealed that S4 retains eqTHN in the endoplasmic reticulum and trans-Golgi network through impacting its anterograde transport to the cell surface and may interfere with the posttranslational modification of this membrane protein. Collectively, our findings uncover an accessory protein, S4, of EIAV and reveal its ability to promote virion release by antagonizing the antiviral activity of the host restriction factor tetherin.
Publication Date: 2025-06-23 PubMed ID: 40549908PubMed Central: PMC12232724DOI: 10.1073/pnas.2413703122Google Scholar: Lookup
The Equine Research Bank provides access to a large database of publicly available scientific literature. Inclusion in the Research Bank does not imply endorsement of study methods or findings by Mad Barn.
  • Journal Article

Summary

This research summary has been generated with artificial intelligence and may contain errors and omissions. Refer to the original study to confirm details provided. Submit correction.

EIAV produces an accessory protein called S4 that helps the virus overcome the host’s antiviral defense by blocking the action of equine tetherin, a protein that normally prevents virus particles from leaving infected cells. This study identifies and characterizes the S4 protein and shows how it supports virus release and replication.

Background and Significance

  • Equine infectious anemia virus (EIAV) is a lentivirus used as a model for understanding virus pathogenesis.
  • Understanding viral genome structure and replication contributes to insight into how viruses cause disease.
  • Host organisms have restriction factors like tetherin that block the release of enveloped viruses to limit infection.
  • Equine tetherin (eqTHN) is a host antiviral protein that inhibits release of EIAV particles from infected cells.

Discovery of the S4 Transcript and Protein

  • Researchers identified a unique EIAV transcript, 369 nucleotides in length, via Sanger sequencing and Northern blotting.
  • This transcript contains a complete open reading frame encoding a previously unknown protein they named S4.
  • S4 expression was confirmed in cells infected by EIAV, showing it is produced during infection.

Functional Role of S4 in Virus Replication

  • A viral clone lacking the S4 gene showed impaired release of virus particles and reduced replication efficiency in vitro.
  • This demonstrates that S4 is important specifically at the virion release step of the viral life cycle.

Interaction Between S4 and Equine Tetherin

  • S4 was found to counteract the antiviral function of eqTHN, enhancing release of EIAV-like particles.
  • S4 physically interacts with eqTHN protein.
  • It sequesters eqTHN within intracellular membrane compartments, preventing eqTHN from reaching the cell surface.
  • By reducing eqTHN on the cell surface, S4 disrupts eqTHN’s ability to block viral particle release.

Mechanism of S4-mediated Tetherin Antagonism

  • S4 retains eqTHN in the endoplasmic reticulum and trans-Golgi network compartments.
  • This retention inhibits the normal transport of eqTHN to the plasma membrane.
  • S4 may also affect posttranslational modifications of eqTHN, potentially impacting its stability or function.

Conclusions and Implications

  • The study uncovers S4 as a novel EIAV accessory protein with a key role in overcoming host defense.
  • S4 promotes virion release by antagonizing equine tetherin’s antiviral activity, facilitating virus spread.
  • These findings expand knowledge of EIAV biology and host-virus interactions relevant to lentiviruses broadly.
  • Understanding how viruses evade tetherin may inform development of antiviral therapies or vaccines.

Cite This Article

APA
Bai B, Zhang X, Zhang M, Ma W, Li J, Zhang H, Na L, Guo X, Lin Y, Wang XF, Wang X. (2025). EIAV encodes an accessory protein that antagonizes the host restriction factor equine tetherin. Proc Natl Acad Sci U S A, 122(26), e2413703122. https://doi.org/10.1073/pnas.2413703122

Publication

ISSN: 1091-6490
NlmUniqueID: 7505876
Country: United States
Language: English
Volume: 122
Issue: 26
Pages: e2413703122
PII: e2413703122

Researcher Affiliations

Bai, Bowen
  • Equine Infectious Diseases and Lentiviruses Division, State Key Laboratory for Animal Disease Control and Prevention, Harbin Veterinary Research Institute of Chinese Academy of Agricultural Sciences, Harbin 150069, China.
Zhang, Xiangmin
  • Equine Infectious Diseases and Lentiviruses Division, State Key Laboratory for Animal Disease Control and Prevention, Harbin Veterinary Research Institute of Chinese Academy of Agricultural Sciences, Harbin 150069, China.
Zhang, Mengmeng
  • Equine Infectious Diseases and Lentiviruses Division, State Key Laboratory for Animal Disease Control and Prevention, Harbin Veterinary Research Institute of Chinese Academy of Agricultural Sciences, Harbin 150069, China.
Ma, Weiwei
  • Equine Infectious Diseases and Lentiviruses Division, State Key Laboratory for Animal Disease Control and Prevention, Harbin Veterinary Research Institute of Chinese Academy of Agricultural Sciences, Harbin 150069, China.
Li, Jiwei
  • Equine Infectious Diseases and Lentiviruses Division, State Key Laboratory for Animal Disease Control and Prevention, Harbin Veterinary Research Institute of Chinese Academy of Agricultural Sciences, Harbin 150069, China.
Zhang, Haili
  • Equine Infectious Diseases and Lentiviruses Division, State Key Laboratory for Animal Disease Control and Prevention, Harbin Veterinary Research Institute of Chinese Academy of Agricultural Sciences, Harbin 150069, China.
Na, Lei
  • Equine Infectious Diseases and Lentiviruses Division, State Key Laboratory for Animal Disease Control and Prevention, Harbin Veterinary Research Institute of Chinese Academy of Agricultural Sciences, Harbin 150069, China.
Guo, Xing
  • Equine Infectious Diseases and Lentiviruses Division, State Key Laboratory for Animal Disease Control and Prevention, Harbin Veterinary Research Institute of Chinese Academy of Agricultural Sciences, Harbin 150069, China.
Lin, Yuezhi
  • Equine Infectious Diseases and Lentiviruses Division, State Key Laboratory for Animal Disease Control and Prevention, Harbin Veterinary Research Institute of Chinese Academy of Agricultural Sciences, Harbin 150069, China.
Wang, Xue-Feng
  • Equine Infectious Diseases and Lentiviruses Division, State Key Laboratory for Animal Disease Control and Prevention, Harbin Veterinary Research Institute of Chinese Academy of Agricultural Sciences, Harbin 150069, China.
Wang, Xiaojun
  • Equine Infectious Diseases and Lentiviruses Division, State Key Laboratory for Animal Disease Control and Prevention, Harbin Veterinary Research Institute of Chinese Academy of Agricultural Sciences, Harbin 150069, China.
  • Institute of Western Agriculture, The Chinese Academy of Agricultural Sciences, Changji 831100, China.

MeSH Terms

  • Infectious Anemia Virus, Equine / genetics
  • Infectious Anemia Virus, Equine / metabolism
  • Infectious Anemia Virus, Equine / physiology
  • Animals
  • Horses
  • Bone Marrow Stromal Antigen 2 / metabolism
  • Bone Marrow Stromal Antigen 2 / genetics
  • Virus Replication
  • Humans
  • Equine Infectious Anemia / virology
  • Equine Infectious Anemia / metabolism
  • Virion / metabolism
  • Viral Regulatory and Accessory Proteins / genetics
  • Viral Regulatory and Accessory Proteins / metabolism

Grant Funding

  • 32172831; 31672578 / MOST | National Natural Science Foundation of China (NSFC)
  • 32170169 / MOST | National Natural Science Foundation of China (NSFC)

Conflict of Interest Statement

Competing interests statement:The authors declare no competing interest.

References

This article includes 48 references
  1. Cook R. F., Leroux C., Issel C. J.. Equine infectious anemia and equine infectious anemia virus in 2013: A review.. Vet. Microbiol. 167, 181–204 (2013).
    pubmed: 24183747
  2. Wang X. F., Zhang X., Ma W., Li J., Wang X.. Host cell restriction factors of equine infectious anemia virus.. Virol. Sin. 38, 485–496 (2023).
    pmc: PMC10436108pubmed: 37419416
  3. Craigo J. K., Montelaro R. C.. Lessons in AIDS vaccine development learned from studies of equine infectious, anemia virus infection and immunity.. Viruses 5, 2963–2976 (2013).
    pmc: PMC3967156pubmed: 24316675
  4. Tang Y. D., Li Y., Cai X. H., Yin X.. Viral live-attenuated vaccines (LAVs): Past and future directions.. Adv. Sci. (Weinh.) 12, e2407241 (2025).
    pmc: PMC11744563pubmed: 39639853
  5. Anvar S. Y.. Full-length mRNA sequencing uncovers a widespread coupling between transcription initiation and mRNA processing.. Genome Biol. 19, 46 (2018).
    pmc: PMC5877393pubmed: 29598823
  6. Karn J., Stoltzfus C. M.. Transcriptional and posttranscriptional regulation of HIV-1 gene expression.. Cold Spring Harb. Perspect. Med. 2, a006916 (2012).
    pmc: PMC3281586pubmed: 22355797
  7. Noiman S., Yaniv A., Sherman L., Tronick S. R., Gazit A.. Pattern of transcription of the genome of equine infectious anemia virus.. J. Virol. 64, 1839–1843 (1990).
    pmc: PMC249326pubmed: 2157066
  8. Beisel C. E., Edwards J. F., Dunn L. L., Rice N. R.. Analysis of multiple mRNAs from pathogenic equine infectious anemia virus (EIAV) in an acutely infected horse reveals a novel protein, Ttm, derived from the carboxy terminus of the EIAV transmembrane protein.. J. Virol. 67, 832–842 (1993).
    pmc: PMC237437pubmed: 8419648
  9. Li J.. Identification of a novel post-transcriptional transactivator from the Equine Infectious Anemia Virus.. J. Virol. 96, e0121022 (2022).
    pmc: PMC9769392pubmed: 36448796
  10. Zhang X.. A novel, fully spliced, accessory gene in equine lentivirus with distinct rev-responsive element.. J. Virol. 96, e0098622 (2022).
    pmc: PMC9517694pubmed: 36069548
  11. Jia B.. Species-specific activity of SIV Nef and HIV-1 Vpu in overcoming restriction by tetherin/BST2.. PLoS Pathog. 5, e1000429 (2009).
    pmc: PMC2673686pubmed: 19436700
  12. Zhang F.. Nef proteins from simian immunodeficiency viruses are tetherin antagonists.. Cell Host Microbe 6, 54–67 (2009).
    pmc: PMC2852097pubmed: 19501037
  13. Neil S. J., Zang T., Bieniasz P. D.. Tetherin inhibits retrovirus release and is antagonized by HIV-1 Vpu.. Nature 451, 425–430 (2008).
    pubmed: 18200009
  14. Van Damme N.. The interferon-induced protein BST-2 restricts HIV-1 release and is downregulated from the cell surface by the viral Vpu protein.. Cell Host Microbe 3, 245–252 (2008).
    pmc: PMC2474773pubmed: 18342597
  15. Perez-Caballero D.. Tetherin inhibits HIV-1 release by directly tethering virions to cells.. Cell 139, 499–511 (2009).
    pmc: PMC2844890pubmed: 19879838
  16. Rosa A.. HIV-1 nef promotes infection by excluding SERINC5 from virion incorporation.. Nature 526, 212–217 (2015).
    pmc: PMC4861059pubmed: 26416734
  17. Hrecka K.. Vpx relieves inhibition of HIV-1 infection of macrophages mediated by the SAMHD1 protein.. Nature 474, 658–661 (2011).
    pmc: PMC3179858pubmed: 21720370
  18. Harris R. S., Liddament M. T.. Retroviral restriction by APOBEC proteins.. Nat. Rev. Immunol. 4, 868–877 (2004).
    pubmed: 15516966
  19. Jouvenet N.. Broad-spectrum inhibition of retroviral and filoviral particle release by tetherin.. J. Virol. 83, 1837–1844 (2009).
    pmc: PMC2643743pubmed: 19036818
  20. Kaletsky R. L., Francica J. R., Agrawal-Gamse C., Bates P.. Tetherin-mediated restriction of filovirus budding is antagonized by the Ebola glycoprotein.. Proc. Natl. Acad. Sci. U.S.A. 106, 2886–2891 (2009).
    pmc: PMC2650360pubmed: 19179289
  21. Sakuma T., Noda T., Urata S., Kawaoka Y., Yasuda J.. Inhibition of Lassa and Marburg virus production by tetherin.. J. Virol. 83, 2382–2385 (2009).
    pmc: PMC2643706pubmed: 19091864
  22. Le Tortorec A., Neil S. J.. Antagonism to and intracellular sequestration of human tetherin by the human immunodeficiency virus type 2 envelope glycoprotein.. J. Virol. 83, 11966–11978 (2009).
    pmc: PMC2772693pubmed: 19740980
  23. Hauser H.. HIV-1 Vpu and HIV-2 Env counteract BST-2/tetherin by sequestration in a perinuclear compartment.. Retrovirology 7, 51 (2010).
    pmc: PMC2890665pubmed: 20529266
  24. Gupta R. K.. Simian immunodeficiency virus envelope glycoprotein counteracts tetherin/BST-2/CD317 by intracellular sequestration.. Proc. Natl. Acad. Sci. U.S.A. 106, 20889–20894 (2009).
    pmc: PMC2791628pubmed: 19864625
  25. Lin Y.. Env diversity-dependent protection of the attenuated equine infectious anaemia virus vaccine.. Emerg. Microbes Infect. 9, 1309–1320 (2020).
    pmc: PMC7473056pubmed: 32525460
  26. Oaks J. L., McGuire T. C., Ulibarri C., Crawford T. B.. Equine infectious anemia virus is found in tissue macrophages during subclinical infection.. J. Virol. 72, 7263–7269 (1998).
    pmc: PMC109949pubmed: 9696821
  27. Lin Y. Z.. The pathogenic and vaccine strains of equine infectious anemia virus differentially induce cytokine and chemokine expression and apoptosis in macrophages.. Virus Res. 160, 274–282 (2011).
    pubmed: 21782860
  28. Wang Y.. Keap1 recognizes EIAV early accessory protein Rev to promote antiviral defense.. PLoS Pathog. 18, e1009986 (2022).
    pmc: PMC8863222pubmed: 35139135
  29. Wang X. F.. High-efficiency rescue of Equine Infectious Anemia Virus from a CMV-driven infectious clone.. Virol. Sin. 34, 725–728 (2019).
    pmc: PMC6888787pubmed: 31376080
  30. Yin X.. Equine tetherin blocks retrovirus release and its activity is antagonized by equine infectious anemia virus envelope protein.. J. Virol. 88, 1259–1270 (2014).
    pmc: PMC3911658pubmed: 24227834
  31. Bai B. The N-glycosylation of equine tetherin affects antiviral activity by regulating its subcellular localization.. Viruses 12, 220 (2020).
    pmc: PMC7077275pubmed: 32079099
  32. Mangeat B. HIV-1 Vpu neutralizes the antiviral factor tetherin/BST-2 by binding it and directing its beta-TrCP2-dependent degradation.. PLoS Pathog 5, e1000574 (2009).
    pmc: PMC2729927pubmed: 19730691
  33. Goffinet C. HIV-1 antagonism of CD317 is species specific and involves Vpu-mediated proteasomal degradation of the restriction factor.. Cell Host Microbe 5, 285–297 (2009).
    pubmed: 19286137
  34. Wang X F. Characterization of equine infectious anemia virus long terminal repeat quasispecies and .. J. Virol. 92, e02150-17 (2018).
    pmc: PMC5874411pubmed: 29386282
  35. Na L, Tang Y D, Wang C, Liu C, Wang X. Rhesus monkey TRIM5alpha protein SPRY domain contributes to AP-1 activation.. J. Biol. Chem. 293, 2661–2674 (2018).
    pmc: PMC5827426pubmed: 29196608
  36. Dube M. Antagonism of tetherin restriction of HIV-1 release by Vpu involves binding and sequestration of the restriction factor in a perinuclear compartment.. PLoS Pathog 6, e1000856 (2010).
    pmc: PMC2851737pubmed: 20386718
  37. Masuyama N. HM1.24 is internalized from lipid rafts by clathrin-mediated endocytosis through interaction with alpha-adaptin.. J. Biol. Chem. 284, 15927–15941 (2009).
    pmc: PMC2708888pubmed: 19359243
  38. Rollason R, Korolchuk V, Hamilton C, Schu P, Banting G. Clathrin-mediated endocytosis of a lipid-raft-associated protein is mediated through a dual tyrosine motif.. J. Cell Sci. 120, 3850–3858 (2007).
    pubmed: 17940069
  39. Bermejo-Barrera P, Fernández-Nocelo S, Moreda-Piñeiro A, Bermejo-Barrera A. Usefulness of enzymatic hydrolysis procedures based on the use of pronase E as sample pre-treatment for multi-element determination in biological materials.. J. Anal. Atom. Spectrom. 14, 1893–1900 (1999).
  40. Grigg M E, McMahon C W, Morkowski S, Rudensky A Y, Pullen A M. Mtv-1 superantigen trafficks independently of major histocompatibility complex class II directly to the B-cell surface by the exocytic pathway.. J. Virol. 72, 2577–2588 (1998).
    pmc: PMC109690pubmed: 9525574
  41. Alvarez C, Sztul E S. Brefeldin a (BFA) disrupts the organization of the microtubule and the actin cytoskeletons.. Eur. J. Cell Biol. 78, 1–14 (1999).
    pubmed: 10082419
  42. Prevost J. Detection of the HIV-1 accessory proteins Nef and Vpu by flow cytometry represents a new tool to study their functional interplay within a single infected CD4(+) T cell.. J. Virol. 96, e0192921 (2022).
    pmc: PMC8941894pubmed: 35080425
  43. Chande A. S2 from equine infectious anemia virus is an infectivity factor which counteracts the retroviral inhibitors SERINC5 and SERINC3.. Proc. Natl. Acad. Sci. U.S.A. 113, 13197–13202 (2016).
    pmc: PMC5135340pubmed: 27803322
  44. Ahmad I. The retroviral accessory proteins S2, Nef, and glycoMA use similar mechanisms for antagonizing the host restriction factor SERINC5.. J. Biol. Chem. 294, 7013–7024 (2019).
    pmc: PMC6497950pubmed: 30862674
  45. Ren H. Equine lentivirus counteracts SAMHD1 restriction by Rev-mediated degradation of SAMHD1 via the BECN1-dependent lysosomal pathway.. Autophagy 17, 2800–2817 (2020).
    pmc: PMC8525956pubmed: 33172327
  46. Zhang F. SIV nef proteins recruit the AP-2 complex to antagonize Tetherin and facilitate virion release.. PLoS Pathog 7, e1002039 (2011).
    pmc: PMC3098198pubmed: 21625568
  47. Morrison JH, Poeschla EM. The feline immunodeficiency virus envelope signal peptide is a tetherin antagonizing protein.. mBio 14, e0016123 (2023).
    pmc: PMC10128041pubmed: 36927083
  48. Zhang X. Equine infectious anemia virus strain LN40 S4 gene, complete cds.. GenBank .

Citations

This article has been cited 1 times.
  1. Chen Y, Wu L, Fan W, Wang Y, Li J, Zhang X, Zhang Z, Li Y, Wang S, Liu Y, Qi X, Zhang Y, Cui H, Duan Y, Gao Y. MARCH2 inhibits avian leukosis virus replication by targeting gp85 for ubiquitination and degradation.. J Virol 2025 Dec 23;99(12):e0161625.
    doi: 10.1128/jvi.01616-25pubmed: 41334913google scholar: lookup