Analyze Diet
Gene2012; 496(1); 45-48; doi: 10.1016/j.gene.2012.01.021

Identification of ORF sequences and exercise-induced expression change in thoroughbred horse OXCT1 gene.

Abstract: In the mitochondrial matrix, the OXCT1 gene catalyzes the reversible transfer of coenzyme A from succinyl-CoA to acetoacetate in a reaction related to energy production from ketone bodies. Here, horse OXCT1 gene containing coenzyme A transferase domain was identified in the transcriptome analysis of cDNAs derived from skeletal muscles. Horse OXCT1 gene consisted of 1761 [corrected] nucleotide sequences with an open reading frame of 1560 nucleotides encoding a protein of 520 putative amino acid residues.The number of non-synonymous substitutions was lower than the number of synonymous substitutions in the OXCT1 genes of other species, indicating that purifying selection occurred in the OXCT1 genes during evolutionary radiation. Quantitative real-time RT-RCR analysis showed a dominant expression pattern of horse OXCT1 gene in the cerebrum, heart, and skeletal muscle. Different expression levels of horse OXCT1 transcripts between before- and after-exercise samples were also measured in the skeletal muscles of six horses. These data could be of great use for further investigation of the relationship between energy products and horse OXCT1 gene.
Publication Date: 2012-01-24 PubMed ID: 22301269DOI: 10.1016/j.gene.2012.01.021Google Scholar: Lookup
The Equine Research Bank provides access to a large database of publicly available scientific literature. Inclusion in the Research Bank does not imply endorsement of study methods or findings by Mad Barn.
  • Comparative Study
  • Journal Article
  • Research Support
  • Non-U.S. Gov't

Summary

This research summary has been generated with artificial intelligence and may contain errors and omissions. Refer to the original study to confirm details provided. Submit correction.

This research article presents findings on the OXCT1 gene in horses, which plays a significant role in energy production from ketone bodies. The study discovers distinct expression levels in horse skeletal muscles before and after exercise, suggesting a connection between energy production and horse OXCT1 genes.

ORF Sequences Identification

  • During their research, the team identified the OXCT1 gene in horses, which contains a coenzyme A transferase domain. This was found during the transcriptome analysis of cDNAs derived from their skeletal muscles.
  • The horse OXCT1 gene is composed of 1761 corrected nucleotide sequences, with an open reading frame of 1560 nucleotides. This encodes a protein with approximately 520 putative amino acid residues.

Evolution of the OXCT1 Gene

  • The researchers then compared the OXCT1 genes across various species. They found that the number of non-synonymous substitutions — changes that affect the gene’s protein structure and function — was lower than the number of synonymous substitutions — those that do not change the protein structure or function.
  • This indicated that a purifying selection occurred in the OXCT1 genes over time. In other words, the OXCT1 genes evolve to discard harmful mutations and preserve beneficial ones, highlighting its importance to the species.

Expression Patterns and Exercise-Induced Change

  • The team conducted a quantitative real-time RT-RCR analysis to measure gene expression. They found that the horse OXCT1 gene had a dominant expression pattern in the cerebrum (part of the brain), heart, and skeletal muscle.
  • Interestingly, they detected different expression levels of horse OXCT1 transcripts between samples taken before and after exercise in the skeletal muscles of six horses. This reveals an exercise-induced change in the expression of the OXCT1 gene, suggesting that it plays a role in the energy production needed during exercise.

Implications and Future Research

  • These findings offer significant groundwork for understanding the role of the OXCT1 gene in energy production in horses, particularly regarding how it’s influenced by exercise.
  • Future investigations are needed to further examine the relationship between energy products and the horse OXCT1 gene. This may contribute significantly to understanding horse physiology and could even have impacts on equine sports and breeding industries.

Cite This Article

APA
Nam GH, Ahn K, Bae JH, Cho BW, Park KD, Lee HK, Yang YM, Kim TH, Seong HH, Han K, Kim HS. (2012). Identification of ORF sequences and exercise-induced expression change in thoroughbred horse OXCT1 gene. Gene, 496(1), 45-48. https://doi.org/10.1016/j.gene.2012.01.021

Publication

ISSN: 1879-0038
NlmUniqueID: 7706761
Country: Netherlands
Language: English
Volume: 496
Issue: 1
Pages: 45-48

Researcher Affiliations

Nam, Gyu-Hwi
  • Department of Biological Sciences, College of Natural Sciences, Pusan National University, Busan 609-735, Republic of Korea.
Ahn, Kung
    Bae, Jin-Han
      Cho, Byung-Wook
        Park, Kyung-Do
          Lee, Hak-Kyo
            Yang, Young-Mok
              Kim, Tae-Hun
                Seong, Hwan-Hoo
                  Han, Kyudong
                    Kim, Heui-Soo

                      MeSH Terms

                      • Animals
                      • Breeding
                      • Cattle
                      • Cell Line
                      • Cerebrum / enzymology
                      • Cerebrum / metabolism
                      • Coenzyme A-Transferases / genetics
                      • Coenzyme A-Transferases / metabolism
                      • Gene Expression Regulation, Enzymologic
                      • Hep G2 Cells
                      • Horses / genetics
                      • Humans
                      • Muscle, Skeletal / enzymology
                      • Muscle, Skeletal / metabolism
                      • Myocardium / enzymology
                      • Myocardium / metabolism
                      • Open Reading Frames / genetics
                      • Physical Conditioning, Animal / physiology
                      • Sequence Analysis, DNA
                      • Tissue Distribution

                      Citations

                      This article has been cited 2 times.
                      1. Tumasian RA 3rd, Harish A, Kundu G, Yang JH, Ubaida-Mohien C, Gonzalez-Freire M, Kaileh M, Zukley LM, Chia CW, Lyashkov A, Wood WH 3rd, Piao Y, Coletta C, Ding J, Gorospe M, Sen R, De S, Ferrucci L. Skeletal muscle transcriptome in healthy aging.. Nat Commun 2021 Apr 1;12(1):2014.
                        doi: 10.1038/s41467-021-22168-2pubmed: 33795677google scholar: lookup
                      2. Yang SD, Ahn SH, Kim JI. 3-Oxoacid CoA transferase 1 as a therapeutic target gene for cisplatin-resistant ovarian cancer.. Oncol Lett 2018 Feb;15(2):2611-2618.
                        doi: 10.3892/ol.2017.7560pubmed: 29434981google scholar: lookup