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Archives of biochemistry and biophysics1999; 362(1); 148-158; doi: 10.1006/abbi.1998.0991

Metmyoglobin/azide: the effect of heme-linked ionizations on the rate of complex formation.

Abstract: The kinetics of formation and dissociation of the horse metmyoglobin/azide complex has been investigated between pH 3.5 and 11.5. The ionic strength dependence of the reaction has been determined at integral pH values between 5 and 10. Hydrazoic acid, HN3, binds to metmyoglobin with a rate constant of (3.8 +/- 1.0) x 10(5) M-1 s-1. Protonation of a group with an apparent pKa of 4.0 +/- 0.3 increases the rate of HN3 binding 6.5-fold to (2.5 +/- 0.8) x 10(6) M-1 s-1. The ionizable group is attributed to the distal histidine, His-64. The azide anion, N-3, binds to metmyoglobin with a rate constant of (4.7 +/- 0.3) x 10(3) M-1 s-1, about two orders of magnitude slower than HN3. Conversion of aquometmyoglobin to hydroxymetmyoglobin slows azide binding significantly. Binding of HN3 to hydroxymetmyoglobin cannot be detected, while N-3 binds to hydroxymetmyoglobin with a rate of 5.7 +/- 3.2 M-1 s-1, almost three orders of magnitude slower than N-3 binding to aquometmyoglobin. Protonation of the distal histidine facilitates HN3 dissociation from the complex. HN3 dissociates from the metmyoglobin/azide complex with a rate constant of 18 +/- 6 s-1, while the azide anion dissociates with a rate constant of 0.16 +/- 0.02 s-1, about 100 times slower. The apparent pKa for His-64 is essentially the same in metmyoglobin and the metmyoglobin/azide complex, 4.0 +/- 0.3 and 4.4 +/- 0.2, respectively. The ionic strength dependence of the observed association rate constant is influenced by both primary and secondary kinetic salt effects. The primary kinetic salt effect is anomalous, with the rate of N-3 binding decreasing with increasing ionic strength above the isoelectric point of metmyoglobin where the protein has a net negative charge. The ionic strength dependence of the dissociation rate constant can be described solely in terms of the ionic strength dependence of the acid dissociation constant for His-64 in the metmyoglobin/azide complex, a secondary kinetic salt effect.
Publication Date: 1999-01-26 PubMed ID: 9917339DOI: 10.1006/abbi.1998.0991Google Scholar: Lookup
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  • Journal Article
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  • Non-P.H.S.
  • Research Support
  • U.S. Gov't
  • P.H.S.

Summary

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The research studied the formation and dissociation rate of horse metmyoglobin/azide complex under various experimental conditions, revealing the impact of heme-linked ionizations. It also elucidated the roles of specific protective groups in the process and the effects of differing ionic strengths.

Study of complex formation and dissociation

  • The investigation involved studying the kinetics – or rates – of formation and dissociation of the metmyoglobin/azide complex derived from horses, ranging from a pH of 3.5 to 11.5.
  • They observed the rate constant for the binding of hydrazoic acid (HN3) to metmyoglobin is 3.8 +/- 1.0 x 10(5) M-1 s-1.
  • Upon protonation of a group (with an apparent pKa of 4.0 +/- 0.3), the rate of HN3 binding increased 6.5-fold, suggesting that a more acidic environment enhances the complex formation.

Role of distal histidine and ionizable groups

  • The researchers attribute the ionizable group that facilitates the HN3 binding to the distal histidine, specifically histidine-64.
  • The binding of the azide anion (N-3) to metmyoglobin has a slower rate constant, approximately 100 times less than that of HN3.
  • When aquometmyoglobin is converted to hydroxymetmyoglobin, the binding process for azide slows down significantly. In fact, HN3 binding to hydroxymetmyoglobin was not detected in the experiment.

Effects of protonation and ionic strength

  • Protonation – or the addition of a proton – of the distal histidine eases the dissociation of HN3 from the complex.
  • The dissociation rate constant of the HN3 from the complex was found to be significantly faster than that of the azide anion.
  • Research demonstrated that the observed association rate constant is affected by both primary and secondary kinetic salt effects, revealing the intricate relationship between ionic strength and the rate of complex formation and dissociation.
  • An increased ionic strength beyond metmyoglobin’s isoelectric point – a pH where the overall charge of the protein is neutral – showed a decrease in the rate of N-3 binding. This primary kinetic salt effect is described as “anomalous”.
  • The dissociation rate constant’s ionic strength dependence could be accounted for solely by the changes in the acid dissociation constant for His-64 in the complex.

Cite This Article

APA
Lin J, Merryweather J, Vitello LB, Erman JE. (1999). Metmyoglobin/azide: the effect of heme-linked ionizations on the rate of complex formation. Arch Biochem Biophys, 362(1), 148-158. https://doi.org/10.1006/abbi.1998.0991

Publication

ISSN: 0003-9861
NlmUniqueID: 0372430
Country: United States
Language: English
Volume: 362
Issue: 1
Pages: 148-158

Researcher Affiliations

Lin, J
  • Department of Chemistry and Biochemistry, Northern Illinois University, DeKalb, Illinois, 60115, USA.
Merryweather, J
    Vitello, L B
      Erman, J E

        MeSH Terms

        • Animals
        • Azides / chemistry
        • Azides / metabolism
        • Heme / chemistry
        • Heme / metabolism
        • Horses
        • Hydrogen-Ion Concentration
        • Ions
        • Kinetics
        • Metmyoglobin / chemistry
        • Metmyoglobin / metabolism
        • Osmolar Concentration
        • Protein Binding
        • Spectrophotometry

        Grant Funding

        • R15 GM54328-01 / NIGMS NIH HHS

        Citations

        This article has been cited 4 times.
        1. Frankenfield K, Marchany-Rivera D, Flanders KG, Cruz-Balberdy A, Lopez-Garriga J, Cerda JF. Fluoride binding to characteristic heme-pocket centers: Insights into ligand stability.. J Inorg Biochem 2021 Nov;224:111578.
        2. Sharpe MA, Krzyaniak MD, Xu S, McCracken J, Ferguson-Miller S. EPR evidence of cyanide binding to the Mn(Mg) center of cytochrome c oxidase: support for Cu(A)-Mg involvement in proton pumping.. Biochemistry 2009 Jan 20;48(2):328-35.
          doi: 10.1021/bi801391rpubmed: 19108635google scholar: lookup
        3. Bidwai AK, Ok EY, Erman JE. pH dependence of cyanide binding to the ferric heme domain of the direct oxygen sensor from Escherichia coli and the effect of alkaline denaturation.. Biochemistry 2008 Sep 30;47(39):10458-70.
          doi: 10.1021/bi800872dpubmed: 18771281google scholar: lookup
        4. Blomberg LM, Blomberg MR, Siegbahn PE. A theoretical study of myoglobin working as a nitric oxide scavenger.. J Biol Inorg Chem 2004 Dec;9(8):923-35.
          doi: 10.1007/s00775-004-0585-5pubmed: 15452775google scholar: lookup