Oxidative cleavage of cellulose in the horse gut.
Abstract: Lytic polysaccharide monooxygenases (LPMOs) belonging to the auxiliary activity 9 family (AA9) are widely found in aerobic fungi. These enzymes are O-dependent copper oxidoreductases that catalyze the oxidative cleavage of cellulose. However, studies that have investigated AA9 LPMOs of aerobic fungi in the herbivore gut are scare. To date, whether oxidative cleavage of cellulose occurs in the herbivore gut is unknown. Results: We report for the first time experimental evidence that AA9 LPMOs from aerobic thermophilic fungi catalyze the oxidative cleavage of cellulose present in the horse gut to C1-oxidized cellulose and C1- and C4-oxidized cello-oligosaccharides. We isolated and identified three thermophilic fungi and measured their growth and AA9 LPMO expression at 37 °C in vitro. We also assessed the expression and the presence of AA9 LPMOs from thermophilic fungi in situ. Finally, we used two recombinant AA9 LPMOs and a native AA9 LPMO from thermophilic fungi to cleave cellulose to yield C1-oxidized products at 37 °C in vitro. Conclusions: The oxidative cleavage of cellulose occurs in the horse gut. This finding will broaden the known the biological functions of the ubiquitous LPMOs and aid in determining biological significance of aerobic thermophilic fungi.
© 2022. The Author(s).
Publication Date: 2022-03-12 PubMed ID: 35279161PubMed Central: PMC8917663DOI: 10.1186/s12934-022-01767-8Google Scholar: Lookup
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Summary
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The research provides experimental evidence for the first time that enzymes called Lytic polysaccharide monooxygenases (LPMOs) from certain fungi can break down cellulose within a horse’s gut. These findings offer new insights into the biological roles of both LPMOs and these specific fungi.
Lytic Polysaccharide Monooxygenases and Their Role
- Lytic Polysaccharide Monooxygenases (LPMOs) are enzymes that belong to the auxiliary activity 9 family (AA9) and are commonly found in aerobic fungi. These enzymes use oxygen and copper to catalyze the oxidative cleavage (breakdown) of cellulose.
- Previous studies investigating the functions of these enzymes in the guts of herbivores have been limited, leaving a gap in understanding whether they facilitate the breakdown of cellulose within these environments.
Study Details and Results
- In this study, the researchers demonstrated that AA9 LPMOs from heat-friendly (thermophilic) fungi can break down cellulose present in a horse’s gut. This breakdown produces C1-oxidized cellulose and C1- and C4-oxidized cello-oligosaccharides, all simpler compounds compared to the original cellulose.
- The team isolated and identified three thermophilic fungi in the horse gut and measured their growth and AA9 LPMO expression at body temperature (37°C) in a laboratory setting (in vitro). They concurrently assessed the expression and presence of these enzymes from the fungi within the horse gut itself (in situ).
- Additionally, they used both engineered (recombinant) and native AA9 LPMOs from these fungi to perform cellulose breakdown in vitro, confirming the ability of these enzymes to produce C1-oxidized compounds at body temperature.
Conclusion and Implications
- The analysis confirmed that cellulose does indeed undergo an oxidative cleavage process within a horse’s gut, effectively enhancing our understanding of the diverse biological roles that LPMOs play beyond those already known.
- In addition, these findings emphasize the potential biological significance of thermophilic fungi in horses, offering a new dimension for further investigation into the functions and impacts of these organisms in both the horse gut and potentially in other herbivorous species as well.
Cite This Article
APA
Liu N, Yu W, Guo X, Chen J, Xia D, Yu J, Li D.
(2022).
Oxidative cleavage of cellulose in the horse gut.
Microb Cell Fact, 21(1), 38.
https://doi.org/10.1186/s12934-022-01767-8 Publication
Researcher Affiliations
- Department of Mycology, Shandong Agricultural University, Taian, Shandong, 271018, China.
- Department of Mycology, Shandong Agricultural University, Taian, Shandong, 271018, China.
- Department of Mycology, Shandong Agricultural University, Taian, Shandong, 271018, China.
- Department of Mycology, Shandong Agricultural University, Taian, Shandong, 271018, China.
- Department of Mycology, Shandong Agricultural University, Taian, Shandong, 271018, China.
- Department of Mycology, Shandong Agricultural University, Taian, Shandong, 271018, China.
- Department of Mycology, Shandong Agricultural University, Taian, Shandong, 271018, China. lidc20@163.com.
MeSH Terms
- Animals
- Cellulose / metabolism
- Horses
- Mixed Function Oxygenases / metabolism
- Oxidative Stress
- Oxidoreductases / metabolism
- Polysaccharides / metabolism
Grant Funding
- 2015BAD15B05 / Ministry of Science and Technology of the People's Republic of China
- 31571949 / National Natural Science Foundation of China
Conflict of Interest Statement
The authors declare that they have no competing interests.
References
This article includes 45 references
- Glass NL. The Enigmatic Universe of the Herbivore Gut.. Trends Biochem Sci 2016 Jul;41(7):561-562.
- Paul SS, Bu DP, Xu JC, Hyde KD, Yu ZT. A phylogenetic census of global diversity of gut anaerobic fungi and a new taxonomic framework.. Fungal Divers 2018;89:253–66.
- Youssef NH, Couger MB, Struchtemeyer CG, Liggenstoffer AS, Prade RA, Najar FZ, Atiyeh HK, Wilkins MR, Elshahed MS. The genome of the anaerobic fungus Orpinomyces sp. strain C1A reveals the unique evolutionary history of a remarkable plant biomass degrader.. Appl Environ Microbiol 2013 Aug;79(15):4620-34.
- Grigoriev IV, Nikitin R, Haridas S, Kuo A, Ohm R, Otillar R, Riley R, Salamov A, Zhao X, Korzeniewski F, Smirnova T, Nordberg H, Dubchak I, Shabalov I. MycoCosm portal: gearing up for 1000 fungal genomes.. Nucleic Acids Res 2014 Jan;42(Database issue):D699-704.
- Solomon KV, Haitjema CH, Henske JK, Gilmore SP, Borges-Rivera D, Lipzen A, Brewer HM, Purvine SO, Wright AT, Theodorou MK, Grigoriev IV, Regev A, Thompson DA, O'Malley MA. Early-branching gut fungi possess a large, comprehensive array of biomass-degrading enzymes.. Science 2016 Mar 11;351(6278):1192-5.
- Haitjema CH, Gilmore SP, Henske JK, Solomon KV, de Groot R, Kuo A, Mondo SJ, Salamov AA, LaButti K, Zhao Z, Chiniquy J, Barry K, Brewer HM, Purvine SO, Wright AT, Hainaut M, Boxma B, van Alen T, Hackstein JHP, Henrissat B, Baker SE, Grigoriev IV, O'Malley MA. A parts list for fungal cellulosomes revealed by comparative genomics.. Nat Microbiol 2017 May 30;2:17087.
- Hanafy RA, Elshahed MS, Liggenstoffer AS, Griffith GW, Youssef NH. Pecoramyces ruminantium, gen. nov., sp. nov., an anaerobic gut fungus from the feces of cattle and sheep.. Mycologia 2017;109(2):231-243.
- Henske JK, Gilmore SP, Knop D, Cunningham FJ, Sexton JA, Smallwood CR, Shutthanandan V, Evans JE, Theodorou MK, O'Malley MA. Transcriptomic characterization of Caecomyces churrovis: a novel, non-rhizoid-forming lignocellulolytic anaerobic fungus.. Biotechnol Biofuels 2017;10:305.
- Berka RM, Grigoriev IV, Otillar R, Salamov A, Grimwood J, Reid I, Ishmael N, John T, Darmond C, Moisan MC, Henrissat B, Coutinho PM, Lombard V, Natvig DO, Lindquist E, Schmutz J, Lucas S, Harris P, Powlowski J, Bellemare A, Taylor D, Butler G, de Vries RP, Allijn IE, van den Brink J, Ushinsky S, Storms R, Powell AJ, Paulsen IT, Elbourne LD, Baker SE, Magnuson J, Laboissiere S, Clutterbuck AJ, Martinez D, Wogulis M, de Leon AL, Rey MW, Tsang A. Comparative genomic analysis of the thermophilic biomass-degrading fungi Myceliophthora thermophila and Thielavia terrestris.. Nat Biotechnol 2011 Oct 2;29(10):922-7.
- Eastwood DC, Floudas D, Binder M, Majcherczyk A, Schneider P, Aerts A, Asiegbu FO, Baker SE, Barry K, Bendiksby M, Blumentritt M, Coutinho PM, Cullen D, de Vries RP, Gathman A, Goodell B, Henrissat B, Ihrmark K, Kauserud H, Kohler A, LaButti K, Lapidus A, Lavin JL, Lee YH, Lindquist E, Lilly W, Lucas S, Morin E, Murat C, Oguiza JA, Park J, Pisabarro AG, Riley R, Rosling A, Salamov A, Schmidt O, Schmutz J, Skrede I, Stenlid J, Wiebenga A, Xie X, Kües U, Hibbett DS, Hoffmeister D, Högberg N, Martin F, Grigoriev IV, Watkinson SC. The plant cell wall-decomposing machinery underlies the functional diversity of forest fungi.. Science 2011 Aug 5;333(6043):762-5.
- Vaaje-Kolstad G, Forsberg Z, Loose JS, Bissaro B, Eijsink VG. Structural diversity of lytic polysaccharide monooxygenases.. Curr Opin Struct Biol 2017 Jun;44:67-76.
- Tõlgo M, Hüttner S, Rugbjerg P, Thuy NT, Thanh VN, Larsbrink J, Olsson L. Genomic and transcriptomic analysis of the thermophilic lignocellulose-degrading fungus Thielavia terrestris LPH172.. Biotechnol Biofuels 2021 Jun 3;14(1):131.
- Bissaro B, Várnai A, Røhr ÅK, Eijsink VGH. Oxidoreductases and Reactive Oxygen Species in Conversion of Lignocellulosic Biomass.. Microbiol Mol Biol Rev 2018 Dec;82(4).
- Magri S, Nazerian G, Segato T, Vieira Monclaro A, Zarattini M, Segato F, Polikarpov I, Cannella D. Polymer ultrastructure governs AA9 lytic polysaccharide monooxygenases functionalization and deconstruction efficacy on cellulose nano-crystals.. Bioresour Technol 2022 Mar;347:126375.
- Brander S, Lausten S, Ipsen JØ, Falkenberg KB, Bertelsen AB, Nørholm MHH, Østergaard LH, Johansen KS. Colorimetric LPMO assay with direct implication for cellulolytic activity.. Biotechnol Biofuels 2021 Feb 27;14(1):51.
- Brander S, Horvath I, Ipsen JØ, Peciulyte A, Olsson L, Hernández-Rollán C, Nørholm MHH, Mossin S, Leggio LL, Probst C, Thiele DJ, Johansen KS. Biochemical evidence of both copper chelation and oxygenase activity at the histidine brace.. Sci Rep 2020 Oct 1;10(1):16369.
- Tokin R, Ipsen JØ, Westh P, Johansen KS. The synergy between LPMOs and cellulases in enzymatic saccharification of cellulose is both enzyme- and substrate-dependent.. Biotechnol Lett 2020 Oct;42(10):1975-1984.
- Zhang R, Liu Y, Zhang Y, Feng D, Hou S, Guo W, Niu K, Jiang Y, Han L, Sindhu L, Fang X. Identification of a thermostable fungal lytic polysaccharide monooxygenase and evaluation of its effect on lignocellulosic degradation.. Appl Microbiol Biotechnol 2019 Jul;103(14):5739-5750.
- Kim IJ, Seo N, An HJ, Kim JH, Harris PV, Kim KH. Type-dependent action modes of TtAA9E and TaAA9A acting on cellulose and differently pretreated lignocellulosic substrates.. Biotechnol Biofuels 2017;10:46.
- Hume ID. Fermentation in the hindgut of mammals.. In: Mackie RI, White BA, editors. Gastrointestinal microbiology: volume 1 Gastrointestinal ecosystems and fermentations. Boston: Springer US; 1997. pp. 84–115.
- Flint HJ, Bayer EA, Rincon MT, Lamed R, White BA. Polysaccharide utilization by gut bacteria: potential for new insights from genomic analysis.. Nat Rev Microbiol 2008 Feb;6(2):121-31.
- Julliand V, Grimm P. The impact of diet on the hindgut microbiome.. J Equine Vet Sci 2017;52:23–8.
- Costa MC, Silva G, Ramos RV, Staempfli HR, Arroyo LG, Kim P, Weese JS. Characterization and comparison of the bacterial microbiota in different gastrointestinal tract compartments in horses.. Vet J 2015 Jul;205(1):74-80.
- Gomez A, Sharma AK, Grev A, Sheaffer C, Martinson K. The Horse Gut Microbiome Responds in a Highly Individualized Manner to Forage Lignification.. J Equine Vet Sci 2021 Jan;96:103306.
- Plancade S, Clark A, Philippe C, Helbling JC, Moisan MP, Esquerré D, Le Moyec L, Robert C, Barrey E, Mach N. Unraveling the effects of the gut microbiota composition and function on horse endurance physiology.. Sci Rep 2019 Jul 3;9(1):9620.
- Sorensen RJ, Drouillard JS, Douthit TL, Ran Q, Marthaler DG, Kang Q, Vahl CI, Lattimer JM. Effect of hay type on cecal and fecal microbiome and fermentation parameters in horses.. J Anim Sci 2021 Jan 1;99(1).
- Liggenstoffer AS, Youssef NH, Couger MB, Elshahed MS. Phylogenetic diversity and community structure of anaerobic gut fungi (phylum Neocallimastigomycota) in ruminant and non-ruminant herbivores.. ISME J 2010 Oct;4(10):1225-35.
- Hanafy RA, Lanjekar VB, Dhakephalkar PK, Callaghan TM, Dagar SS, Griffith GW, Elshahed MS, Youssef NH. Seven new Neocallimastigomycota genera from wild, zoo-housed, and domesticated herbivores greatly expand the taxonomic diversity of the phylum.. Mycologia 2020 Nov-Dec;112(6):1212-1239.
- Chen C, Chen J, Geng Z, Wang M, Liu N, Li D. Regioselectivity of oxidation by a polysaccharide monooxygenase from Chaetomium thermophilum.. Biotechnol Biofuels 2018;11:155.
- Li DC, Lu M, Li YL, Lu J. Purification and characterization of an endocellulase from the thermophilic fungus Chaetomium thermophilum.. Enzyme Microb Technol 2003;33:932–7.
- Li AN, Yu K, Liu HQ, Zhang J, Li H, Li DC. Two novel thermostable chitinase genes from thermophilic fungi: cloning, expression and characterization.. Bioresour Technol 2010 Jul;101(14):5546-51.
- Yang X, Liu L, Wang XW. Fungal diversity in herbivore feces in the Tibetan Plateau.. Mycosystema 2014;33:621–31.
- Chen J, Guo X, Zhu M, Chen C, Li D. Polysaccharide monooxygenase-catalyzed oxidation of cellulose to glucuronic acid-containing cello-oligosaccharides.. Biotechnol Biofuels 2019;12:42.
- Quinlan RJ, Sweeney MD, Lo Leggio L, Otten H, Poulsen JC, Johansen KS, Krogh KB, Jørgensen CI, Tovborg M, Anthonsen A, Tryfona T, Walter CP, Dupree P, Xu F, Davies GJ, Walton PH. Insights into the oxidative degradation of cellulose by a copper metalloenzyme that exploits biomass components.. Proc Natl Acad Sci U S A 2011 Sep 13;108(37):15079-84.
- McClendon SD, Batth T, Petzold CJ, Adams PD, Simmons BA, Singer SW. Thermoascus aurantiacus is a promising source of enzymes for biomass deconstruction under thermophilic conditions.. Biotechnol Biofuels 2012 Jul 28;5(1):54.
- Hu H, da Costa RR, Pilgaard B, Schiøtt M, Lange L, Poulsen M. Fungiculture in Termites Is Associated with a Mycolytic Gut Bacterial Community.. mSphere 2019 May 15;4(3).
- Brune A, Emerson D, Breznak JA. The Termite Gut Microflora as an Oxygen Sink: Microelectrode Determination of Oxygen and pH Gradients in Guts of Lower and Higher Termites.. Appl Environ Microbiol 1995 Jul;61(7):2681-7.
- Brune A. Termite guts: the world’s smallest bioreactors.. Trends Biotechnol 1998;16:16–21.
- Brune A. Symbiotic digestion of lignocellulose in termite guts.. Nat Rev Microbiol 2014 Mar;12(3):168-80.
- Harris PV, Welner D, McFarland KC, Re E, Navarro Poulsen JC, Brown K, Salbo R, Ding H, Vlasenko E, Merino S, Xu F, Cherry J, Larsen S, Lo Leggio L. Stimulation of lignocellulosic biomass hydrolysis by proteins of glycoside hydrolase family 61: structure and function of a large, enigmatic family.. Biochemistry 2010 Apr 20;49(15):3305-16.
- Kolbusz MA, Di Falco M, Ishmael N, Marqueteau S, Moisan MC, Baptista CDS, Powlowski J, Tsang A. Transcriptome and exoproteome analysis of utilization of plant-derived biomass by Myceliophthora thermophila.. Fungal Genet Biol 2014 Nov;72:10-20.
- LOWRY OH, ROSEBROUGH NJ, FARR AL, RANDALL RJ. Protein measurement with the Folin phenol reagent.. J Biol Chem 1951 Nov;193(1):265-75.
- Laemmli UK. Cleavage of structural proteins during the assembly of the head of bacteriophage T4.. Nature 1970 Aug 15;227(5259):680-5.
- Phillips CM, Beeson WT, Cate JH, Marletta MA. Cellobiose dehydrogenase and a copper-dependent polysaccharide monooxygenase potentiate cellulose degradation by Neurospora crassa.. ACS Chem Biol 2011 Dec 16;6(12):1399-406.
- Beeson WT, Phillips CM, Cate JH, Marletta MA. Oxidative cleavage of cellulose by fungal copper-dependent polysaccharide monooxygenases.. J Am Chem Soc 2012 Jan 18;134(2):890-2.
Citations
This article has been cited 5 times.- Wunderlich G, Bull M, Ross T, Rose M, Chapman B. Understanding the microbial fibre degrading communities & processes in the equine gut. Anim Microbiome 2023 Jan 12;5(1):3.
- Lin W, Liu L, Liang J, Tang X, Shi J, Zhang L, Wu P, Lan S, Wang S, Zhou Y, Chen X, Zhao Y, Chen X, Wu B, Guo L. Changes of endophytic microbial community in Rhododendron simsii roots under heat stress and its correlation with leaf physiological indicators. Front Microbiol 2022;13:1006686.
- Jia X, Zhang Y, Tian B, Zhang G, Mao S, Qian W, Sun D, Liu J. Integrative analysis of rumen microbiota and host multi-organ interactions underlying feed conversion efficiency in Hu sheep. J Anim Sci Biotechnol 2026 Feb 3;17(1):19.
- Szóstak N, Kozłowski P, Zuo T, Philips A. The role of gut mycobiome in responses to cancer immunotherapy. Gut Microbes 2025 Dec 31;17(1):2571433.
- Harvey DJ. Analysis of carbohydrates and glycoconjugates by matrix-assisted laser desorption/ionization mass spectrometry: An update for 2021-2022. Mass Spectrom Rev 2025 May-Jun;44(3):213-453.
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