PRINS detection of 18S rDNA in pig, red fox and Chinese raccoon dog, and centromere DNA in horse.
Abstract: The fluorescence in situ hybridization (FISH) technique is widely used in animal cytogenetics. Contrary to FISH procedure, primed in situ DNA synthesis (PRINS) does not require the DNA probe preparation (design, synthesis, gel purification of PCR products and labeling). The PRINS method with primers used as 'DNA probes' is both PCR-sensitive and allows for chromosomal localization of DNA sequences. Here, we show the application of PRINS reaction with one unlabeled oligonucleotide pair to identify 18S rDNA loci in three different animal species: domestic pig (Sus scrofa), red fox (Vulpes vulpes) and Chinese raccoon dog (Nyctereutes procyonoides procyonoides). We present the data of indirect labeling with the digoxigenin-PRINS using two different pairs of primers complementary to centromeric region of horse (Equus caballus) chromosomes. Our new PRINS application may be considered as a useful tool for chromosome investigation in the field of domestic and wild animal genetics and evolution.
© 2010 The Authors.
Publication Date: 2010-12-15 PubMed ID: 21166802DOI: 10.1111/j.1601-5223.2010.02201.xGoogle Scholar: Lookup
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- Journal Article
- Research Support
- Non-U.S. Gov't
Summary
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The study focuses on the use of a DNA probing method known as PRINS (Primed in Situ DNA synthesis) to identify 18S rDNA sequences in multiple animal species. Utilizing specific pairs of primers, the indirect labeling of the centromeric region of horse chromosomes was also achieved.
About PRINS
- PRINS (Primed in Situ DNA synthesis) is a technique used in the study of animal genetics.
- This technique does not need the typical DNA probe preparation that is necessary for Fluorescence in situ hybridization (FISH), which is another commonly used technique in animal cytogenetics.
- The PRINS method leverages specific primers as ‘DNA probes’, a feature that makes it PCR-sensitive, meaning it can amplify and therefore detect small amounts of DNA.
Application of PRINS in the Research
- The researchers used PRINS to identify 18S rDNA loci, or positions, in three different animal species: the domestic pig (Sus scrofa), red fox (Vulpes vulpes), and the Chinese raccoon dog (Nyctereutes procyonoides procyonoides).
- The usage of PRINS in this way demonstrates its functionality in locating specific DNA sequences in animals.
Indirect Labeling on Horse Chromosomes
- The research also inclusive of the application of PRINS in the indirect labeling of the centromeric region of horse (Equus caballus) chromosomes.
- This was performed using two distinct sets of primers complementary to the horse’s centromeric region.
- This achievement further exemplifies the versatility of the PRINS technique in the investigation of chromosome characteristics for both domestic and wild animal genetics and evolution.
Conclusion of the Research
- The study confirms that the PRINS method can indeed be employed as a beneficial tool in comparative genomics and cytogenetics for studying various animal species.
- The technique allows for an efficient and effective approach to investigate chromosomal data substantial to the fields of animal genetics and evolution.
Cite This Article
APA
Wnuk M, Oklejewicz B, Lewinska A, Zabek T, Bartosz G, Slota E, Bugno-Poniewierska M.
(2010).
PRINS detection of 18S rDNA in pig, red fox and Chinese raccoon dog, and centromere DNA in horse.
Hereditas, 147(6), 320-324.
https://doi.org/10.1111/j.1601-5223.2010.02201.x Publication
Researcher Affiliations
- Department of Genetics, University of Rzeszow, Rzeszow, Poland.
MeSH Terms
- Animals
- Centromere / genetics
- Chromosomes, Mammalian / genetics
- DNA, Ribosomal / genetics
- Foxes
- Horses
- Primed In Situ Labeling
- RNA, Ribosomal, 18S / genetics
- Raccoon Dogs
- Species Specificity
- Swine
Citations
This article has been cited 1 times.- Vujošević M, Rajičić M, Blagojević J. B Chromosomes in Populations of Mammals Revisited. Genes (Basel) 2018 Oct 9;9(10).
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