Analyze Diet
Journal of advanced veterinary and animal research2023; 10(4); 639-646; doi: 10.5455/javar.2023.j719

Recent sequencing and phylogenetic analysis of equine herpesviruses 1 and 4 among different equine populations in Egypt.

Abstract: Equine herpes viruses (EHVs) are considered one of the most important respiratory pathogens in equids, resulting in serious outcomes for equine health worldwide. The objectives of the current research were the detection, molecular characterization, and isolation of EHV-1 and EHV-4 circulating within different equine populations in Egypt, either clinically or in apparently healthy horses. Unassigned: A total of 120 field samples were collected, and DNA was extracted. Screening and typing of extracted DNA were done by consensus and conventional PCR assays for detection of EHV-1 and EHV-4, followed by sequencing and phylogenetic analysis to confirm the virus identity. Selected positive samples for both EHV-1 and EHV-4 were subjected to Madin-Darby bovine kidney (MDBK) cell lines for virus isolation. Unassigned: The obtained results revealed that 58/120 (48%) samples were positive for EHVs. Typing of positive samples showed that EHV-1 was detected in (48/120) 40% of samples and EHV-4 was detected in (15/120) 12% of samples, while dual infection by both EHV-1 and 4 was detected in five samples. Unassigned: The current study revealed new data on the continuous circulation of EHV-1 and EHV-4 within equine populations in Egypt, and individual horses could be infected by multiple EHVs. In addition, latently infected horses are acting as potential reservoirs for frequent virus reactivation.
Publication Date: 2023-12-31 PubMed ID: 38370903PubMed Central: PMC10868697DOI: 10.5455/javar.2023.j719Google Scholar: Lookup
The Equine Research Bank provides access to a large database of publicly available scientific literature. Inclusion in the Research Bank does not imply endorsement of study methods or findings by Mad Barn.
  • Journal Article

Summary

This research summary has been generated with artificial intelligence and may contain errors and omissions. Refer to the original study to confirm details provided. Submit correction.

This research is about studying the presence and characteristics of Equine herpesviruses (EHVs) among different horse populations in Egypt. The focus was on the detection, molecular characterization, isolation and analysis of EHV-1 and EHV-4, significant respiratory pathogens harmful to equine health.

Methodology and Data Collection

  • 120 field samples were collected from clinically ill and apparently healthy horses.
  • DNA was extracted from these samples for screening and typing, using consensus and conventional Polymerase Chain Reaction (PCR) assays to detect EHV-1 and EHV-4.
  • Further confirmation of the virus identity was done through sequencing and phylogenetic analysis.
  • Selected positive samples were subjected to Madin-Darby bovine kidney (MDBK) cell lines for virus isolation.

Results and Findings

  • Out of 120 samples, 58 (48%) were found positive for EHVs.
  • EHV-1 was detected in 40% of the samples, and EHV-4 was detected in 12%.
  • Five samples were found to have dual infection – both EHV-1 and EHV-4.
  • The results implied the regular presence of EHV-1 and EHV-4 among equine populations in Egypt.
  • The study also identified that individual horses could be affected by multiple EHVs.
  • Moreover, latently infected horses were identified that could act as potential reservoirs for regular virus reactivation.

Implications of the Study

The study offers new data about the ongoing circulation of EHV-1 and EHV-4 within horse populations in Egypt. Such research can aid preventative measures and treatments for this significant equine health issue. It also highlights the possibility of individual horses being infected with multiple forms of the virus and acting as reservoirs for its reactivation, emphasizing the need for effective control mechanisms.

Cite This Article

APA
El-Zayat M, Shemies OA, Mosad SM, El Rahman SA. (2023). Recent sequencing and phylogenetic analysis of equine herpesviruses 1 and 4 among different equine populations in Egypt. J Adv Vet Anim Res, 10(4), 639-646. https://doi.org/10.5455/javar.2023.j719

Publication

ISSN: 2311-7710
NlmUniqueID: 101647585
Country: Bangladesh
Language: English
Volume: 10
Issue: 4
Pages: 639-646

Researcher Affiliations

El-Zayat, Mohamed
  • Virology Research Department (VRD), Agricultural Research Center (ARC), Animal Health Research Institute (AHRI), Giza, Egypt.
Shemies, Omayma A
  • Virology Research Department (VRD), Agricultural Research Center (ARC), Animal Health Research Institute (AHRI), Giza, Egypt.
Mosad, Samah M
  • Department of Virology, Faculty of Veterinary Medicine, Mansoura University, Mansoura, Egypt.
El Rahman, Sahar Abd
  • Department of Virology, Faculty of Veterinary Medicine, Mansoura University, Mansoura, Egypt.

Conflict of Interest Statement

The authors manifested that they have no conflicts of interest.

References

This article includes 36 references
  1. Giannetto C, Giudice E, Piccione G, Castronovo C, Arfuso F. Immune and inflammatory response in horse vaccinated against equine herpesviruses 1 (EHV-1) and 4 (EHV-4) assessed by serum protein electrophoretic pattern and leukocyte population. J Equine Vet Sci 2022;116:104051.
    pubmed: 35753636doi: 10.1016/j.jevs.2022.104051google scholar: lookup
  2. Oladunni FS, Horohov DW, Chambers TM. EHV-1: a constant threat to the horse industry. Front Microbiol 2019;10:2668.
    pmc: PMC6901505pubmed: 31849857doi: 10.3389/fmicb.2019.02668google scholar: lookup
  3. OIE. Equine rhinopneumonitis (infection with equid herpesvirus-1 and -4). In: manual of diagnositc tests and vaccines for terrestial animals. OIE World Organization for Animal Health 2019.
  4. Laval K, Poelaert KC, Van Cleemput J, Zhao J, Vandekerckhove AP, Gryspeerdt AC. The pathogenesis and immune evasive mechanisms of equine herpesvirus type 1. Front Microbiol 2021;12:662686.
    pmc: PMC7970122pubmed: 33746936doi: 10.3389/fmicb.2021.662686google scholar: lookup
  5. Zarski LM, Giessler KS, Jacob SI, Weber PS, McCauley AG, Lee Y. Identification of host factors associated with the development of equine herpesvirus myeloencephalopathy by transcriptomic analysis of peripheral blood mononuclear cells from horses. Viruses 2021;13(3):356.
    pmc: PMC7995974pubmed: 33668216doi: 10.3390/v13030356google scholar: lookup
  6. Carvalho R, Passos LM, Martins AS. Development of a differential multiplex PCR assay for equine herpesvirus 1 and 4 as a diagnostic tool. J Vet Med 2000;47(5):351–9.
  7. Davison AJ, Eberle R, Ehlers B, Hayward GS, McGeoch DJ, Minson AC. The order herpesvirales. Arch Virol 2009;154:171–7.
    pmc: PMC3552636pubmed: 19066710doi: 10.1007/s00705-008-0278-4google scholar: lookup
  8. Bryant NA, Wilkie GS, Russell CA, Compston L, Grafham D, Clissold L. Genetic diversity of equine herpesvirus 1 isolated from neurological, abortigenic and respiratory disease outbreaks. Transb Emerg Dis 2018;65:817–32.
    pmc: PMC5947664pubmed: 29423949doi: 10.1111/tbed.12809google scholar: lookup
  9. Schoch CL, Ciufo S, Domrachev M, Hotton CL, Kannan S, Khovanskaya R. NCBI taxonomy: a comprehensive update on curation, resources and tools. Database 2020:baaa062.
    pmc: PMC7408187pubmed: 32761142doi: 10.1093/database/baaa062google scholar: lookup
  10. El-Hage C, Mekuria Z, Dynon K, Hartley C, McBride K, Gilkerson J. Association of equine herpesvirus 5 with mild respiratory disease in a Survey of EHV1,-2,-4 and-5 in 407 Australian Horses. Animals 2021;11(12):3418.
    pmc: PMC8697987pubmed: 34944194doi: 10.3390/ani11123418google scholar: lookup
  11. Saklou N, Pleasant S, Lahmers K, Funk R. Prevalence of latent equid herpesvirus type 1 in submandibular lymph nodes of horses in Virginia. Pathogens 2023;12(6):813.
    pmc: PMC10301069pubmed: 37375503doi: 10.3390/pathogens12060813google scholar: lookup
  12. Allen GP, Breathnach CC. Quantification by real-time PCR of the magnitude and duration of leucocyte-associated viraemia in horses infected with neuropathogenic vs. non-neuropathogenic strains of EHV-1. Equine Vet J 2006;38(3):252–7.
    pubmed: 16706281doi: 10.2746/042516406776866453google scholar: lookup
  13. Hussey SB, Clark R, Lunn KF, Breathnach C, Soboll G, Whalley JM. Detection and quantification of equine herpesvirus-1 viremia and nasal shedding by real-time polymerase chain reaction. J Vet Diag Invest 2006;18(4):335–42.
    pubmed: 16921871doi: 10.1177/104063870601800403google scholar: lookup
  14. Nicola P, Hussey SB, Mapes S, Leutenegger CM, Madigan JE, Ferraro GL. Comparison of four methods to quantify equid herpesvirus 1 load by real-time polymerase chain reaction in nasal secretions of experimentally and naturally infected horses. J Vet Diagn Invest 2009;21(6):836–40.
    pubmed: 19901285doi: 10.1177/104063870902100611google scholar: lookup
  15. Abd El-Hafeiz YG, Abu Maaty A, Darwish S. Isolation of equine herpesvirus-1 (EHV-1) as a cause of reproductive disorders with emphasis on antigenic and genetic identifications. Int J Microbiol Res 2010;1:26–32.
  16. Amer HM, Shaltout AK, El-Sabagh IM, El-Sanousi AA, Shalaby MA. Prevalence of equine herpes viruses 1, 2 and 4 in Arabian horse population in Egypt. Afr J Microbiol Res 2011;5(27):4805–11.
    doi: 10.5897/ajmr11.421google scholar: lookup
  17. Abd El-Hamid MI, ElZeedy AS, El-Sanousi AA, Reda IM, Nehal SS, Abbas AM. Isolation of field isolate of equine herpes virus-1 based on molecular detection and characterization of glycoprotein D. Egypt J Virol 2015;12:54–64.
  18. Kalad SA, Hassan FM, Said F. Using indirect ELISA and PCR for the diagnosis of equine herpes virus-1 (EHV-1) infection in Egypt. J Vet Med Res 2016;23(1):117–124.
    doi: 10.21608/jvmr.2016.43230google scholar: lookup
  19. Afify AF, Ahmed BM, Salem SA, El-Sanousi AA, Shalaby MA. First isolation and identification of EHV 4 during abortion outbreak among Arabian horses in Egypt reflects an alteration in pathogenic potentiality of EHV 4. J Virol Sci 2017;2:92–101.
  20. Azab W, Bedair S, Abdelgawad A, Eschke K, Farag G, Abdel-Raheim A. Detection of equid herpesviruses among different Arabian horse populations in Egypt. Vet Med Sci 2019;5(3):361–71.
    pmc: PMC7155215pubmed: 31149784doi: 10.1002/vms3.176google scholar: lookup
  21. Ali AA, Refat NA, Algabri NA, Sobh MS. Fetal lesions of EHV-1 in equine. Acad Bras Cienc 2020;92:1–11.
    pubmed: 32965312doi: 10.1590/0001-3765202020180837google scholar: lookup
  22. Mohammed S, Bazid A, Shahein M, Abo-Elkhair M. Isolation and identification of some viruses causing abortion in equine in Egypt. J Curr Vet Res 2022;4(2):68–79.
    doi: 10.21608/jcvr.2022.267515google scholar: lookup
  23. VanDevanter DR, Warrener P, Bennett L, Schultz ER, Coulter S, Garber RL. Detection and analysis of diverse herpesviral species by consensus primer PCR. J Clin Microbiol 1996;34(7):1666.
  24. Taktaz Hafshejani T, Nekoei S, Vazirian B, Doosti A, Khamesipour F, Anyanwu MU. Molecular detection of equine herpesvirus types 1 and 4 infection in healthy horses in Isfahan central and Shahrekord southwest regions, Iran. BioMed Res Int 2015;2015.
    pmc: PMC4569764pubmed: 26421307doi: 10.1155/2015/917854google scholar: lookup
  25. Garvey M, Lyons R, Hector RD, Walsh C, Arkins S, Cullinane A. Molecular characterisation of equine herpesvirus 1 isolates from cases of abortion, respiratory and neurological disease in Ireland between 1990 and 2017. Pathogens 2019;8(1):7.
    pmc: PMC6471309pubmed: 30650561doi: 10.3390/pathogens8010007google scholar: lookup
  26. Reed SM, Toribio RE. Equine herpesvirus 1 and 4. Vet Clin North Am Equine Pract 2004;20(3):631–42.
    pubmed: 15519823doi: 10.1016/j.cveq.2004.09.001google scholar: lookup
  27. Allen G. Respiratory infections by equine herpesvirus types1 and 4. International Veterinary Information Service (IVIS) Ithaca, NY: 2002.
  28. Ma G, Azab W, Osterrieder N. Equine herpesviruses type 1 (EHV-1) and 4 (EHV-4)—masters of co-evolution and a constant threat to equids and beyond. Vet Microbiol 2013 167(1–2):123–34.
    pubmed: 23890672doi: 10.1016/j.vetmic.2013.06.018google scholar: lookup
  29. Al-Shammari Z, Ahmed B, Haroun M, Afify A, Elsanousi AA, Shalaby M. A first molecular phylogeny of an Egyptian equine herpesvirus-4 strain derived from a fetal Arabian horse. J Vet Sci Med Diag 2016;5(1):2–4.
    doi: 10.4172/2325-9590.1000186google scholar: lookup
  30. Mohamed SI, Mohamed AS, Ayman HD, Sayed AS. Prevalence of equine herpes viruses 1 and 4 in Arabian horses’ population. Egypt J Virol Sci 2017;2:1–9.
  31. Khattab OM, AbdelmegeedHK MM, HamdyME HN, Hamed A, Fahmy HA, Ibrahim E. Equine herpes virus 4 (EHV4) investigation in aborted Egyptian Mares; molecular detection, isolation, and phylogeny for viral glycoprotein B. Adv Anim Vet Sci 2022;10(9):1907–15.
  32. Vargas-Bermudez D, Corredor FA, Ramírez-Nieto G, Vera AV, Jaime CJ. Detection of equine herpesvirus 1 and 4 and its association with latency-associated transcripts in naturally infected horses in Colombia. J Re MVZ Córdoba 2018;23:6826–37.
    doi: 10.21897/rmvz.1371google scholar: lookup
  33. Thiry E, Meurens F, Muylkens B, McVoy M, Gogev S, Thiry J. Recombination in alphaherpesviruses. Rev Med Virol 2005;15(2):89–103.
    pubmed: 15546129doi: 10.1002/rmv.451google scholar: lookup
  34. Nicola P, Mapes S, David W. Comparison of the diagnostic sensitivity of nasopharyngeal and nasal swabs and use of viral loads for the molecular diagnosis of equine herpesvirus-1 infection. Med Infect Dis 2007;53:220–24.
  35. Nicola P, Hussey SB, Mapes S, Leutenegger CM, Madigan JE, Ferraro GL. Comparison of four methods to quantify equid herpesvirus 1 load by real-time polymerase chain reaction in nasal secretions of experimentally and naturally infected horses. J Vet Diagn Invest 2009;21(6):836–40.
    pubmed: 19901285doi: 10.1177/104063870902100611google scholar: lookup
  36. OIE. Equine rhinotracheitis. Manual of Standards Diagnostic Tests and Vaccines 4th edition. Part 2 Chapter 2.5.7 2000.