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Animal genetics2017; 48(6); 691-693; doi: 10.1111/age.12583

A genome-wide association study for equine recurrent airway obstruction in European Warmblood horses reveals a suggestive new quantitative trait locus on chromosome 13.

Abstract: Recurrent airway obstruction (RAO), also known as heaves, is an asthma-like respiratory disease. Its development is strongly influenced by environmental risk factors such as sensitization and exposure to moldy hay, straw bedding and stabling indoors. A hereditary component has been documented in previous studies; however, so far no causative genetic variant that influences the risk of developing RAO has been identified. In this study, we revised an existing dataset and selected 384 horses for genotyping on the Affymetrix high-density equine SNP array. We performed an allelic case-control genome-wide association study, which revealed a suggestively significant association on equine chromosome 13 at 32 843 309 bp. This SNP is located in the protein-coding gene TXNDC11, which is possibly involved in the folding process of the multiprotein complexes DUOX1 and DUOX2. In humans, these proteins are known to take part in regulating the production of H O in the respiratory tract epithelium as well as in MUC5AC mucin expression. Therefore, TXNDC11 may be considered a functional candidate gene, and further research is needed to explore its potential role in RAO-affected horses.
Publication Date: 2017-07-24 PubMed ID: 28737212DOI: 10.1111/age.12583Google Scholar: Lookup
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  • Journal Article

Summary

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The research article investigates the genetic factors contributing to recurrent airway obstruction, an asthma-like respiratory disease in horses, and suggests a new genetic locus on chromosome 13 that might be influential.

Overview of the Study

  • This research focuses on Recurrent airway obstruction (RAO), a respiratory disease, similar to human asthma, that affects horses. This disease’s development is influenced by environmental factors, such as exposure to moldy hay or straw bedding, and indoor stabling.
  • While prior studies have indicated a hereditary component to RAO, no defined genetic variant has been discovered that impacts the horse’s risk of acquiring the illness.
  • The researchers in this study revisited an existing dataset and selected 384 horses for genotyping using the Affymetrix high-density equine SNP array. This process allowed them to search for potential genetic variants associated with RAO.

Genome-wide Association Study Findings

  • An allelic case-control genome-wide association study was performed. This method aims to identify specific genetic variants that occur more often in individuals with a particular condition (in this case, RAO) than in those without it.
  • The study revealed a significant association on chromosome 13 at a specific location (32,843,309 bp). The identified Single-nucleotide polymorphism (SNP) is situated within the TXNDC11 gene.

Implications and Future Research Directions

  • In terms of biochemical function, TXNDC11 has been found to potentially be involved in the folding process of DUOX1 and DUOX2 multiprotein complexes. These proteins regulate the production of hydrogen peroxide in the respiratory tract epithelium and the expression of MUC5AC mucin in humans. Such processes could be correlated with respiratory diseases.
  • These findings suggest that TXNDC11 could play a role in the manifestation of RAO in horses, marking it as a functional candidate gene for further investigation.
  • The authors highlight the necessity for further studies to understand the potential role of TXNDC11 in horses affected by RAO and to verify its relevance to the disease.

Cite This Article

APA
Schnider D, Rieder S, Leeb T, Gerber V, Neuditschko M. (2017). A genome-wide association study for equine recurrent airway obstruction in European Warmblood horses reveals a suggestive new quantitative trait locus on chromosome 13. Anim Genet, 48(6), 691-693. https://doi.org/10.1111/age.12583

Publication

ISSN: 1365-2052
NlmUniqueID: 8605704
Country: England
Language: English
Volume: 48
Issue: 6
Pages: 691-693

Researcher Affiliations

Schnider, D
  • Swiss Institute of Equine Medicine ISME, Vetsuisse Faculty, University of Bern, Länggassstrasse 124, 3012, Bern, Switzerland.
  • Swiss National Stud Farm, Agroscope, Les Longs-Prés, 1580, Avenches, Switzerland.
Rieder, S
  • Swiss National Stud Farm, Agroscope, Les Longs-Prés, 1580, Avenches, Switzerland.
Leeb, T
  • Institute of Genetics, Vetsuisse Faculty, University of Bern, Bremgartenstrasse 109a, 3012, Bern, Switzerland.
Gerber, V
  • Swiss Institute of Equine Medicine ISME, Vetsuisse Faculty, University of Bern, Länggassstrasse 124, 3012, Bern, Switzerland.
  • Swiss National Stud Farm, Agroscope, Les Longs-Prés, 1580, Avenches, Switzerland.
Neuditschko, M
  • Swiss National Stud Farm, Agroscope, Les Longs-Prés, 1580, Avenches, Switzerland.

MeSH Terms

  • Airway Obstruction / genetics
  • Airway Obstruction / veterinary
  • Animals
  • Carrier Proteins / genetics
  • Case-Control Studies
  • Genetic Association Studies
  • Genotype
  • Horse Diseases / genetics
  • Horses / genetics
  • Polymorphism, Single Nucleotide
  • Quantitative Trait Loci

Citations

This article has been cited 6 times.
  1. Simões J, Batista M, Tilley P. The Immune Mechanisms of Severe Equine Asthma-Current Understanding and What Is Missing. Animals (Basel) 2022 Mar 16;12(6).
    doi: 10.3390/ani12060744pubmed: 35327141google scholar: lookup
  2. Couetil L, Cardwell JM, Leguillette R, Mazan M, Richard E, Bienzle D, Bullone M, Gerber V, Ivester K, Lavoie JP, Martin J, Moran G, Niedźwiedź A, Pusterla N, Swiderski C. Equine Asthma: Current Understanding and Future Directions. Front Vet Sci 2020;7:450.
    doi: 10.3389/fvets.2020.00450pubmed: 32903600google scholar: lookup
  3. Raudsepp T, Finno CJ, Bellone RR, Petersen JL. Ten years of the horse reference genome: insights into equine biology, domestication and population dynamics in the post-genome era. Anim Genet 2019 Dec;50(6):569-597.
    doi: 10.1111/age.12857pubmed: 31568563google scholar: lookup
  4. Mason VC, Schaefer RJ, McCue ME, Leeb T, Gerber V. eQTL discovery and their association with severe equine asthma in European Warmblood horses. BMC Genomics 2018 Aug 2;19(1):581.
    doi: 10.1186/s12864-018-4938-9pubmed: 30071827google scholar: lookup
  5. van der Vliet A, Danyal K, Heppner DE. Dual oxidase: a novel therapeutic target in allergic disease. Br J Pharmacol 2018 May;175(9):1401-1418.
    doi: 10.1111/bph.14158pubmed: 29405261google scholar: lookup
  6. Simões J, Tilley P. Decision Making in Severe Equine Asthma-Diagnosis and Monitoring. Animals (Basel) 2023 Dec 16;13(24).
    doi: 10.3390/ani13243872pubmed: 38136909google scholar: lookup