A synergistic dual-endopeptidase platform for high-yield, homogeneous F(ab’)2 production from polyclonal equine immunoglobulins for therapeutic applications.
Abstract: Therapeutic F(ab') fragments derived from polyclonal equine antisera remain essential emergency biologics for addressing snake envenomation, tetanus, and viral infections. Traditional production methods rely on pepsin digestion, which is limited by non-specific proteolysis, harsh acidic conditions (pH 2.0-4.0), risk of contamination from animal sources, and significant batch variability, often complicating downstream preparative separations. In this study, we introduce a synergistic dual-endopeptidase platform that integrates hinge-specific biocatalysis with affinity chromatography to facilitate high-yield, homogeneous F(ab') production under mild, near-physiological conditions (pH 7.8-8.2). We discovered that IdeZ2, derived from Streptococcus equi ssp. zooepidemicus, effectively cleaved the majority of equine IgG subclasses but was unable to process the structurally resistant IgG(T) fraction (IgG3 and IgG5). The incorporation of IdeS from Streptococcus pyogenes provided orthogonal specificity, selectively targeting the IdeZ2-resistant IgG(T) pool. In a unified reaction, this dual-enzyme approach achieved near-complete conversion of the substrate. Following Protein A affinity column removal of Fc-bearing species, the product attained >97% F(ab') purity by SEC-HPLC with exceptional recovery (92.2% protein yield and 77.1% total potency yield from plasma). For industrial applications, IdeZ2 and IdeS were covalently immobilized on CNBr-activated agarose, creating a reusable heterogeneous biocatalyst that maintained 90% recovery through at least six reuse cycles. Collectively, these findings demonstrate a robust, mechanism-driven alternative to traditional pepsin processes, supporting the production of consistently high-quality equine F(ab') therapeutics for global health applications.
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Overview
This research presents a novel dual-enzyme method to produce homogeneous F(ab’)2 fragments from polyclonal equine immunoglobulins with high yield and purity under gentle conditions, improving upon traditional pepsin digestion techniques.
Background and Importance
F(ab’) fragments from polyclonal equine antisera are crucial emergency therapeutics for treating snake bites, tetanus, and certain viral infections.
Conventional production of these fragments depends on pepsin digestion, which operates under harsh acidic conditions (pH 2.0-4.0) and carries risks such as:
Non-specific breakdown of proteins (proteolysis) leading to heterogeneous product mixtures.
Potential contamination from animal-derived materials.
High batch-to-batch variability complicating downstream purification processes.
Objective and Approach
The study introduces a synergistic dual-endopeptidase platform designed to improve the production of F(ab’)2 fragments by combining:
Hinge-specific biocatalysis using two enzymes—IdeZ2 and IdeS.
Affinity chromatography for efficient purification.
The reaction is conducted under mild, near-physiological pH (7.8–8.2), avoiding harsh acidic conditions.
Enzyme Specificities and Dual-Enzyme Strategy
IdeZ2, derived from Streptococcus equi ssp. zooepidemicus:
Effectively cleaves most subclasses of equine IgG antibodies.
However, it does not cleave the structurally resistant IgG(T) subclass (IgG3 and IgG5).
IdeS, derived from Streptococcus pyogenes:
Targets the IdeZ2-resistant IgG(T) subclass with orthogonal specificity.
By combining IdeZ2 and IdeS in one reaction, nearly complete cleavage of all equine IgG subclasses is achieved, producing homogeneous F(ab’)2 fragments.
Purification and Yield
After enzyme digestion, Protein A affinity chromatography is used to remove Fc portions, enriching the F(ab’)2 fragments.
The purified F(ab’)2 product exhibits:
Higher than 97% purity as confirmed by size-exclusion chromatography high-performance liquid chromatography (SEC-HPLC).
Excellent recovery rates: 92.2% of the protein is recovered, and 77.1% of total biological potency is retained from starting plasma material.
Industrial Application and Reusability
For scalable production, researchers immobilized IdeZ2 and IdeS covalently on CNBr-activated agarose beads, creating a reusable heterogeneous biocatalyst.
This immobilization strategy showed:
Maintenance of approximately 90% enzymatic activity after at least six reuse cycles.
Potential for cost-effective and consistent industrial manufacturing due to reusability and robust performance.
Significance and Conclusion
This study establishes a mechanism-driven and gentle enzymatic alternative to the traditional pepsin-based process, addressing many limitations of the earlier method.
The dual-endopeptidase platform produces high-purity, high-potency F(ab’)2 therapeutics suitable for large-scale production.
These improvements can enhance the accessibility, safety, and efficacy of equine immunoglobulin-based therapies vital for global health crises, especially in emergencies involving envenomation and infectious diseases.
Cite This Article
APA
Shen CK, Liu J, Xu K, Xu P, Li Z, Wang L, Li C, Ding F, Xiao C, Yao X, Jing Y.
(2026).
A synergistic dual-endopeptidase platform for high-yield, homogeneous F(ab’)2 production from polyclonal equine immunoglobulins for therapeutic applications.
J Chromatogr B Analyt Technol Biomed Life Sci, 1280, 125111.
https://doi.org/10.1016/j.jchromb.2026.125111
Jiangxi Institute of Biological Products (Shenzhen) R&D Center Co. Ltd, China; Jiangxi Institute of Biological Products Inc., China. Electronic address: cliftonshen@gmail.com.
Liu, Jiao
Glycogene Inc., China.
Xu, Kai
Glycogene Inc., China.
Xu, Pingyu
Jiangxi Institute of Biological Products Inc., China.
Li, Zhijie
Gaotai Tianhong Biochemical Technology Development Co. Ltd, China.
Wang, Li
Gaotai Tianhong Biochemical Technology Development Co. Ltd, China.
Li, Changqing
Gaotai Tianhong Biochemical Technology Development Co. Ltd, China.
Ding, Fengling
Glycogene Inc., China.
Xiao, Cong
Glycogene Inc., China.
Yao, Xiaodong
Jiangxi Institute of Biological Products Inc., China.
Jing, Yue
Jiangxi Institute of Biological Products (Shenzhen) R&D Center Co. Ltd, China; Jiangxi Institute of Biological Products Inc., China.
MeSH Terms
Animals
Horses
Immunoglobulin Fab Fragments / metabolism
Immunoglobulin Fab Fragments / chemistry
Immunoglobulin Fab Fragments / isolation & purification
Chromatography, Affinity / methods
Immunoglobulin G / metabolism
Immunoglobulin G / chemistry
Bacterial Proteins / metabolism
Bacterial Proteins / chemistry
Endopeptidases / metabolism
Endopeptidases / chemistry
Streptococcus equi / enzymology
Conflict of Interest Statement
Declaration of competing interest The authors declare the following financial interests/personal relationships which may be considered as potential competing interests: Clifton Kwang-Fu Shen, Pingyu, Xu, Xiaodong Yao, Yue Jing reports a relationship with Jiangxi Institute of Biological Products that includes: employment. Clifton Kwang-Fu Shen, Yue Jing reports a relationship with Jiangxi Institute of Biological Product (Shenzhen) R&D Center that includes: employment. Zhijie Li, Wang Li, Changqing Li reports a relationship with Gaotai Tianhong Biochemical Technology Development Co. Ltd. that includes: employment. Jiao Liu, Kai Xu, Fengling Ding, Cong Xiao reports a relationship with Glycogene Inc. that includes: employment. Clifton Kwang-Fu Shen, Jiao Liu, Kai Xu, Pingyu, Xu, Yue Jing, Xiaodong Yao, Cong Xiao has patent #一种采用固定化双酶平台制备马F(ab′)2 制剂及其制备方法 pending to Jiangxi Institute of Biological Products. Clifton Kwang-Fu Shen, Jiao Liu, Kai Xu, Pingyu, Xu, Yue Jing, Xiaodong Yao, Cong Xiao has patent #一种多酶一锅法制备马F(ab′)2 和马Fab'制剂的方法 pending to Jiangxi Institute of Biological Products. Clifton Kwang-Fu Shen, Jiao Liu, Kai Xu, Pingyu, Xu, Yue Jing, Xiaodong Yao, Cong Xiao has patent 一种抗原特异性富集的完整马IgG(T)抗毒素制剂的制备方法 pending to Jiangxi Institute of Biological Products. If there are other authors, they declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.