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Methods in molecular biology (Clifton, N.J.)2018; 1785; 121-128; doi: 10.1007/978-1-4939-7841-0_8

B-Cell Epitope Mapping Using a Library of Overlapping Synthetic Peptides in an Enzyme-Linked Immunosorbent Assay.

Abstract: This chapter describes a strategy for mapping linear B-cell epitopes of proteins using synthetic biotinylated peptides in an ELISA.A set of overlapping peptides were designed based upon a known amino acid sequence of the target protein, VapA (Virulence-associated Protein A) of the bacterium Rhodococcus equi, an important pulmonary pathogen in foals. The peptides synthesized as biotinylated peptides were coated directly onto micro titer plates which had been pre-coated with NeutrAvidin™ and used to screen sera from foals confirmed to have R. equi disease. A linear B-cell epitope was identified which corresponded to a 20 mer sequence of the VapA protein.
Publication Date: 2018-05-02 PubMed ID: 29714015DOI: 10.1007/978-1-4939-7841-0_8Google Scholar: Lookup
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  • Journal Article
  • Research Support
  • Non-U.S. Gov't

Summary

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The research article discusses a methodology for identifying specific parts of proteins, or B-cell epitopes, that antibodies bind to using synthetic peptides and a lab technique called ELISA. The study specifically looked at a protein from a bacteria called Rhodococcus equi, which can cause lung disease in young horses.

Methodology

  • The researchers used a technique called Enzyme-Linked Immunosorbent Assay (ELISA), which is a common laboratory test used to detect the presence of an antibody or antigen in a sample.
  • They used synthetic peptides – short chains of amino acids – which were biotinylated, or tagged with a molecule called biotin. This biotin molecule helps in binding the peptides onto a surface such as a microtiter plate.
  • The peptides were designed to overlap with each other, meaning that each peptide shared some of the same amino acids with the next one. The sequence of these peptides was based on a known sequence from a protein called VapA.
  • NeutrAvidin, a protein that has a high affinity for biotin, was used to pre-coat the microtiter plates. The biotinylated peptides were then added to these plates where they strongly adhered to the NeutrAvidin.

Application and Discoveries

  • Once the peptides were coated onto the plates, they were used to screen sera (the clear part of the blood) from foals that were confirmed to have Rhodococcus equi disease.
  • The interaction of these sera with the coated peptides enabled the researchers to identify a linear B-cell epitope, which is a particular section of the VapA protein that can be recognized and bound by an antibody.
  • This mapping of B-cell epitopes allows scientists to understand more about how the immune system recognizes and reacts to specific pathogens, such as Rhodococcus equi. The identified epitopes can be used for the development of diagnostics or vaccines.

Cite This Article

APA
Vanniasinkam T, Barton MD, Das TP, Heuzenroeder MW. (2018). B-Cell Epitope Mapping Using a Library of Overlapping Synthetic Peptides in an Enzyme-Linked Immunosorbent Assay. Methods Mol Biol, 1785, 121-128. https://doi.org/10.1007/978-1-4939-7841-0_8

Publication

ISSN: 1940-6029
NlmUniqueID: 9214969
Country: United States
Language: English
Volume: 1785
Pages: 121-128

Researcher Affiliations

Vanniasinkam, Thiru
  • School of Biomedical Sciences, Charles Sturt University, Wagga Wagga, NSW, Australia. tvanniasinkam@csu.edu.au.
Barton, Mary D
  • School of Pharmacy and Medical Sciences, University of South Australia, Adelaide, SA, Australia.
Das, Tongted Phumoonna
  • The Alfred Hospital, Melbourne, VIC, Australia.
Heuzenroeder, Michael W
  • SA Pathology, Adelaide, SA, Australia.

MeSH Terms

  • Animals
  • Bacterial Proteins / chemistry
  • Bacterial Proteins / immunology
  • Enzyme-Linked Immunosorbent Assay / methods
  • Epitope Mapping / methods
  • Epitopes, B-Lymphocyte / genetics
  • Epitopes, B-Lymphocyte / immunology
  • Horses / immunology
  • Horses / microbiology
  • Peptide Library
  • Peptides / immunology
  • Rhodococcus equi / immunology
  • Rhodococcus equi / pathogenicity

Citations

This article has been cited 2 times.
  1. Monti A, Vitagliano L, Caporale A, Ruvo M, Doti N. Targeting Protein-Protein Interfaces with Peptides: The Contribution of Chemical Combinatorial Peptide Library Approaches.. Int J Mol Sci 2023 Apr 25;24(9).
    doi: 10.3390/ijms24097842pubmed: 37175549google scholar: lookup
  2. Forner M, Cañas-Arranz R, Defaus S, de León P, Rodríguez-Pulido M, Ganges L, Blanco E, Sobrino F, Andreu D. Peptide-Based Vaccines: Foot-and-Mouth Disease Virus, a Paradigm in Animal Health.. Vaccines (Basel) 2021 May 8;9(5).
    doi: 10.3390/vaccines9050477pubmed: 34066901google scholar: lookup