Characterization of a microsatellite in the promoter region of the IGF1 gene in domestic horses and other equids.
Abstract: Insulin-like growth factor 1 (IGF1) regulates growth and metabolic functions in vertebrates. A dinucleotide repeat sequence located at the promoter region of the IGF1 gene has been reported in several vertebrate species and may affect the control of the transcriptional activity of this gene. The genotypes of animals from seven horse breeds were determined in order to study the potential association of allelic forms of this microsatellite with adult body size differences found in domestic horses. Among these breeds, five alleles were found. Breed-specific differences in adult body size could not be attributed to the presence or absence of any of the alleles observed. In addition, animals representing five other equid species were typed. Examples of apparent species-specific alleles were found. However, overlapping polymorphic size ranges preclude this microsatellite from being an absolute identifier for species or hybrid status in equids. The polymorphisms found at this IGF1 locus are useful for synteny and linkage mapping.
Publication Date: 1998-04-29 PubMed ID: 9549060
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- Comparative Study
- Journal Article
- Research Support
- Non-U.S. Gov't
Summary
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The researchers explored a specific genetic sequence called ‘microsatellite’ in the promoter area of the insulin-like growth factor 1 (IGF1) gene in horses and other related species. The study did not find any direct association between this microsatellite and different adult body sizes among these species. Nevertheless, this genetic sequence can be useful for creating synteny and linkage maps.
Understanding the Research
- The focus of this research was the insulin-like growth factor 1 (IGF1) gene which is known to influence growth and metabolism in species from the vertebrate group. The gene’s ‘promoter region’ – where regulation of transcription takes place – contains a DNA sequence known as a ‘microsatellite’, a repetitive genetic sequence, was the central subject of examination in this research.
- The researchers aimed to investigate if the connection between the microsatellite and adult body size differences in domestic horses could be established by looking at its variations called ‘alleles’. Seven horse breeds were included to determine their genotypes.
Key Findings and Implications
- The researchers identified five differing alleles among the seven horse breeds studied. However, their study did not affirm any correlation between these alleles and the differences in adult body size among the horse breeds.
- The study also included animals from five other species from the equid family. Some alleles found were specific to these species, yet the overlapping polymorphic size ranges mean that this microsatellite cannot be utilized for absolute identification of species or hybrid status within the equid family.
- Notwithstanding these results on body size and species identification, the study concludes that the polymorphisms – variations in the DNA sequence – found at the IGF1 locus (or location of the gene on the chromosome) can be useful for synteny and linkage mapping. This is a process that shows how genes are organized and relate to each other in the genome, which is essential for better understanding genome structures and identifying disease genes.
Cite This Article
APA
Caetano AR, Bowling AT.
(1998).
Characterization of a microsatellite in the promoter region of the IGF1 gene in domestic horses and other equids.
Genome, 41(1), 70-73.
Publication
Researcher Affiliations
- Veterinary Genetics Laboratory, University of California-Davis 95616-8744, USA. arcaetano@ucdavis.edu
MeSH Terms
- Alleles
- Animals
- Base Sequence
- Body Constitution / genetics
- DNA / genetics
- Dinucleotide Repeats
- Equidae / anatomy & histology
- Equidae / genetics
- Horses / anatomy & histology
- Horses / genetics
- Humans
- Insulin-Like Growth Factor I / genetics
- Microsatellite Repeats
- Molecular Sequence Data
- Polymerase Chain Reaction
- Polymorphism, Genetic
- Promoter Regions, Genetic
- Sequence Homology, Nucleic Acid
- Species Specificity
Citations
This article has been cited 1 times.- Grossi Ddo A, Buzanskas ME, Grupioni NV, de Paz CC, Regitano LC, de Alencar MM, Schenkel FS, Munari DP. Effect of IGF1, GH, and PIT1 markers on the genetic parameters of growth and reproduction traits in Canchim cattle.. Mol Biol Rep 2015 Jan;42(1):245-51.
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