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European journal of biochemistry2001; 268(16); 4537-4543; doi: 10.1046/j.1432-1327.2001.02373.x

Cytochrome c reconstituted from two peptide fragments displays native-like redox properties.

Abstract: Recombination of two fragments of horse cytochrome c (the heme-containing N-fragment, residues 1-56, and the C-fragment, residues 57-104), which are substantially unstructured at neutral pH, gives rise to a 1:1 fragment complex with a compact conformation, in which the alpha helical structure and the native Met80-Fe(III) axial bond are recovered. With respect to the native protein, the ferric complex shows a less rigid atomic packing and a decreased stability [Delta(DeltaG(o))D = 14.7 kJ.mol(-1)], ascribed to perturbations involving the Trp59 microenvironment and, to a lower extent, the heme pocket region. The redox potential, E1/2 = 234 +/- 5 mV vs. normal hydrogen electrode at 25 degrees C, is close to that of the intact protein, consistent with recovery of the native Met80-heme Fe(III) axial bond. Furthermore, the fragment complex shows reactivity similar to intact cytochrome c, in the reaction with cytochrome c oxidase. We conclude that the absence in the complex of some native cross-links and interlocked packing important for protein rigidity and stability is not as relevant for maintaining the native redox properties of the protein, provided that some structural requirements (i.e. recovering of the native-like alpha helical structure) are fulfilled and coordination of Met80 to the heme-iron is restored.
Publication Date: 2001-08-15 PubMed ID: 11502215DOI: 10.1046/j.1432-1327.2001.02373.xGoogle Scholar: Lookup
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  • Journal Article
  • Research Support
  • Non-U.S. Gov't

Summary

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The research paper discusses an experiment where two fragments of horse cytochrome c are recombined, exhibiting mostly similar but slightly less stable chemical properties compared to the original protein. The difference in stability is credited to slight disturbances in the protein’s structure, although the protein still maintains its fundamental function of transferring electrons.

Understanding Cytochrome c

  • Cytochrome c is a small protein found in almost all living cells, primarily within the mitochondria.
  • It plays a key role in the electron transport chain, facilitating the transport of electrons during the process of creating adenosine triphosphate (ATP), the main energy source for metabolic functions.

The Experiment

  • In the experiment, the researchers split a horse cytochrome c protein into two fragments (N-fragment, residues 1-56, and C-fragment, residues 57-104).
  • They then recombined these fragments, creating a 1:1 fragment complex with a compact conformation.

Observations and Findings

  • The researchers found that this recombined protein had recovered the alpha helical structure and the native Met80-Fe(III) axial bond, similar to a complete cytochrome c protein.
  • The ferric complex showed a less rigid atomic packing and a decreased stability when compared to the original protein, suggesting perturbations involving the Trp59 microenvironment and, to a lesser extent, the heme pocket region.
  • The recombined protein also showcased a redox potential near-identical to the intact protein, indicating recovery of the native Met80-heme Fe(III) axial bond.

Conclusions

  • Despite the decreased stability and structural disturbances, the recombined protein demonstrated reactivity similar to a complete cytochrome c protein in its reaction with cytochrome c oxidase.
  • The researchers thus concluded that while the absence of some native cross-links and the interlocked packing impacted the rigidity and stability of the protein, the native redox properties remained largely unaffected, provided that certain structural elements were preserved.

Cite This Article

APA
Sinibaldi F, Fiorucci L, Mei G, Ferri T, Desideri A, Ascoli F, Santucci R. (2001). Cytochrome c reconstituted from two peptide fragments displays native-like redox properties. Eur J Biochem, 268(16), 4537-4543. https://doi.org/10.1046/j.1432-1327.2001.02373.x

Publication

ISSN: 0014-2956
NlmUniqueID: 0107600
Country: England
Language: English
Volume: 268
Issue: 16
Pages: 4537-4543

Researcher Affiliations

Sinibaldi, F
  • Department of Experimental Medicine and Biochemical Sciences, University of Rome 'Tor Vergata', Italy.
Fiorucci, L
    Mei, G
      Ferri, T
        Desideri, A
          Ascoli, F
            Santucci, R

              MeSH Terms

              • Animals
              • Circular Dichroism
              • Cytochrome c Group / chemistry
              • Cytochrome c Group / metabolism
              • Enzyme Stability
              • Horses
              • Oxidation-Reduction

              Citations

              This article has been cited 2 times.
              1. Sinibaldi F, Mei G, Polticelli F, Piro MC, Howes BD, Smulevich G, Santucci R, Ascoli F, Fiorucci L. ATP specifically drives refolding of non-native conformations of cytochrome c.. Protein Sci 2005 Apr;14(4):1049-58.
                doi: 10.1110/ps.041069405pubmed: 15741329google scholar: lookup
              2. Caroppi P, Sinibaldi F, Santoni E, Howes BD, Fiorucci L, Ferri T, Ascoli F, Smulevich G, Santucci R. The 40s Omega-loop plays a critical role in the stability and the alkaline conformational transition of cytochrome c.. J Biol Inorg Chem 2004 Dec;9(8):997-1006.
                doi: 10.1007/s00775-004-0601-9pubmed: 15503233google scholar: lookup