Cytogenetic mapping of immunity-related genes in the domestic horse.
Abstract: Chromosomal locations of 19 horse immunity-related loci (CASP1, CD14, EIF5A, FCER1A, IFNG, IL12A, IL12B, IL12RB2, IL1A, IL23A, IL4, IL6, MMP7, MS4A2, MYD88, NOS2A, PTGS2, TFRC and TLR2) were determined by fluorescence in situ hybridization. For IFNG and PTGS2, this study is a confirmation of their previously reported position. In addition, microsatellite (HMBr1) was localized in the same region as IFNG. All genes were assigned to regions of conserved synteny and the data obtained in this study enhance the comparative human-horse map. Cytogenetic localization of IL6 to ECA4q14-q21.1 suggested a new breakage point that changes the order of loci compared with HSA7. The map assignments of these loci serve as anchors for other loci and will aid in the search for candidate genes associated with traits in the horse.
Publication Date: 2005-11-19 PubMed ID: 16293125DOI: 10.1111/j.1365-2052.2005.01348.xGoogle Scholar: Lookup
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- Comparative Study
- Journal Article
- Research Support
- Non-U.S. Gov't
Summary
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The research paper is about the mapping of 19 horse immunity-related genes on chromosomes. Identification of these genes’ chromosomal locations can assist in finding candidate genes linked to traits in horses.
Objective of the Study
- The goal of the study was to determine the chromosomal locations of 19 horse immunity-related genes. These genes have a significant impact on horses’ immune responses against different diseases.
Methodology
- The researchers employed fluorescence in situ hybridization, a technique used to visualize specific locations of genes on chromosomes, to determine the chromosomal positions of these 19 genes.
Key Findings
- The study confirmed the previously reported positions of two genes, IFNG and PTGS2 on the chromosomes.
- The research also found a microsatellite (a repetitive DNA sequence in the genome), HMBr1, in the same region as the IFNG gene.
- All genes were assigned to regions of conserved synteny, implying that these areas preserve the same order of genes across different species.
Significance of the Research
- The data obtained in this study supports the comparative human-horse map, assisting in understanding the similarities and differences in the genetic makeup of horses and humans in terms of immunity.
- The study suggests a new breakage point for the IL6 gene in the horse chromosome (ECA4q14-q21.1). This changes the order of gene loci compared to its counterpart on human chromosome 7 (HSA7).
- The chromosomal assignments of these genes can act as anchors for other genes position determination.
- Furthermore, the research aids in the search for candidate genes associated with traits in the horse. This can potentially assist in selective breeding for specific traits, disease management and overall health improvement of the horses.
Cite This Article
APA
Musilova P, Kubickova S, Vychodilova-Krenkova L, Kralik P, Matiasovic J, Hubertova D, Rubes J, Horin P.
(2005).
Cytogenetic mapping of immunity-related genes in the domestic horse.
Anim Genet, 36(6), 507-510.
https://doi.org/10.1111/j.1365-2052.2005.01348.x Publication
Researcher Affiliations
- Department of Genetics and Reproduction, Veterinary Research Institute, Brno 621 32, Czech Republic. musilova@vri.cz
MeSH Terms
- Animals
- Chromosome Mapping
- DNA Primers
- Genes / genetics
- Genes / immunology
- Horses / genetics
- Horses / immunology
- Humans
- In Situ Hybridization, Fluorescence
- Microsatellite Repeats / genetics
- Species Specificity
- Synteny / genetics
Citations
This article has been cited 3 times.- Musilova P, Kubickova S, Vahala J, Rubes J. Subchromosomal karyotype evolution in Equidae. Chromosome Res 2013 Apr;21(2):175-87.
- Potaczek DP, Kamijo M, Hara M, Okumura K, Undas A, Nishiyama C. A comparative search for human FcεRIα gene (FCER1A) 3'-UTR polymorphisms in Japanese and Polish populations. Mol Biol Rep 2012 Apr;39(4):3747-53.
- Zhang Y, Duan S, Lin X, Zhang W, Meng N, Zhao L, Zhao Y, Han D, Zhang L. SNPs in the FCER1A gene region show no association with allergic rhinitis in a Han Chinese population. PLoS One 2010 Dec 31;5(12):e15792.
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