Genetic Diversity and Population Structure of Arabian Horse Populations Using Microsatellite Markers.
Abstract: Understanding the genetic diversity and the relationships among the show Arabian horse populations is a current issue for breeders and professionals. This study aimed to define the relationship among the Desert breed, the Straight Egyptian, and the Polish Arabian populations by considering the historical background of their origin and to verify their genetic diversity. All selected samples were related to Arabian show activities. One hundred forty four hair samples were collected from horses at stud farms having notoriety in the breeding of Arabians from different geographic regions. A set of 17 microsatellites markers for parentage control were used for genotyping. Genetic diversity among and between these populations were evaluated using several statistical methods. All the microsatellites were informative and the marker set analyzed provided 145 alleles. The average number of alleles per locus was 6.52, 6.35, and 7 for the Desert breed, Straight Egyptian, and Polish Arabian, respectively. The high genetic diversity observed within the three populations (0.63-0.71) was associated with a high number of effective alleles. Desert breed and Polish Arabian populations appeared the closest, whereas the Egyptian population was more distant. The significant positive inbreeding coefficient F found in Desert breed, Straight Egyptian, and Polish Arabian horses (0.09, 0.14, and 0.11, respectively) confirmed the deficit of heterozygosity observed in these populations. These results suggested that the three populations have high levels of gene flow or share the same origin and have a recent divergence. This study may highlight the risk of the loss of gene diversity in these populations and help to implement appropriate breeding programs to preserve genetic diversity.
Copyright © 2020 Elsevier Inc. All rights reserved.
Publication Date: 2020-07-31 PubMed ID: 32972687DOI: 10.1016/j.jevs.2020.103200Google Scholar: Lookup
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Summary
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This research article investigates genetic diversity and relationships among three types of Arabian horse populations. The study identified the connections between these breeds, assessed their genetic diversity and suggested implications for future preservation efforts.
Objective of Research
- The main aim of this research was to characterize the genetic diversity within three Arabian horse populations: the Desert breed, the Straight Egyptian, and the Polish Arabian. The researchers wanted to understand their interrelationships and the impact of their historical origins on their genetic diversity.
Procedure and Methods
- The study involved collecting hair samples from 144 horses related to Arabian show activities, representing the three different horse breeds, from stud farms well-known for breeding Arabian horses.
- A set of 17 microsatellite markers, commonly used for parentage control, were employed for genotyping.
- Genetic diversity within and between these populations was determined using multiple statistical methods.
Results
- A total of 145 alleles were provided by the set of microsatellites examined. For the three horse breeds, the average number of alleles per locus was 6.52, 6.35, and 7, respectively.
- A high level of genetic diversity was found within the three populations, with values ranging from 0.63 to 0.71, which was connected to a large number of effective alleles.
- The Desert breed and Polish Arabian populations appeared genetically closest, while the Straight Egyptian population was relatively distant.
- The populations showed significant positive inbreeding coefficients (values between 0.09 and 0.14), suggesting a deficit of heterozygosity within these groups.
Conclusion
- The results suggested that the three horse populations might have high levels of gene flow among them, or they may share a common origin with a recent divergence.
- Findings of this study underline the concern of potential loss of gene diversity in these Arabian horse populations, emphasizing the need to design and implement suitable breeding programs in order to maintain their genetic diversity.
Cite This Article
APA
Machmoum M, Boujenane I, Azelhak R, Badaoui B, Petit D, Piro M.
(2020).
Genetic Diversity and Population Structure of Arabian Horse Populations Using Microsatellite Markers.
J Equine Vet Sci, 93, 103200.
https://doi.org/10.1016/j.jevs.2020.103200 Publication
Researcher Affiliations
- Veterinary Genetic Laboratory, Department of Medicine, Surgery and Reproduction, Institut Agronomique et Vétérinaire Hassan II, Rabat, Morocco. Electronic address: anismach@yahoo.fr.
- Department of Animal Production and Biotechnology, Institut Agronomique et Vétérinaire Hassan II, Rabat, Morocco.
- American Foundouk, Fez, Morocco.
- Biodiversity, Ecology and Genome Laboratory, Department of Biology, Mohammed V University, Faculty of Science, Rabat, Morocco.
- Laboratoire Peirene, EA7500, University of Limoges, Limoges, France.
- Veterinary Genetic Laboratory, Department of Medicine, Surgery and Reproduction, Institut Agronomique et Vétérinaire Hassan II, Rabat, Morocco.
MeSH Terms
- Animals
- Egypt
- Genetic Variation / genetics
- Genetics, Population
- Horses / genetics
- Inbreeding
- Microsatellite Repeats / genetics
Citations
This article has been cited 3 times.- Cardinali I, Giontella A, Tommasi A, Silvestrelli M, Lancioni H. Unlocking Horse Y Chromosome Diversity.. Genes (Basel) 2022 Dec 2;13(12).
- Önder H, Şen U, Piwczyński D, Kolenda M, Drewka M, Abacı SH, Takma Ç. Comparison of Random Regression Models with Different Order Legendre Polynomials for Genetic Parameter Estimation on Race Completion Speed of Arabian Horses.. Animals (Basel) 2022 Sep 30;12(19).
- Remer V, Bozlak E, Felkel S, Radovic L, Rigler D, Grilz-Seger G, Stefaniuk-Szmukier M, Bugno-Poniewierska M, Brooks S, Miller DC, Antczak DF, Sadeghi R, Cothran G, Juras R, Khanshour AM, Rieder S, Penedo MC, Waiditschka G, Kalinkova L, Kalashnikov VV, Zaitsev AM, Almarzook S, Reißmann M, Brockmann GA, Brem G, Wallner B. Y-Chromosomal Insights into Breeding History and Sire Line Genealogies of Arabian Horses.. Genes (Basel) 2022 Jan 26;13(2).
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