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Animal genetics2004; 35(4); 270-277; doi: 10.1111/j.1365-2052.2004.01166.x

Genetic diversity in German draught horse breeds compared with a group of primitive, riding and wild horses by means of microsatellite DNA markers.

Abstract: We compared the genetic diversity and distance among six German draught horse breeds to wild (Przewalski's Horse), primitive (Icelandic Horse, Sorraia Horse, Exmoor Pony) or riding horse breeds (Hanoverian Warmblood, Arabian) by means of genotypic information from 30 microsatellite loci. The draught horse breeds included the South German Coldblood, Rhenish German Draught Horse, Mecklenburg Coldblood, Saxon Thuringa Coldblood, Black Forest Horse and Schleswig Draught Horse. Despite large differences in population sizes, the average observed heterozygosity (H(o)) differed little among the heavy horse breeds (0.64-0.71), but was considerably lower than in the Hanoverian Warmblood or Icelandic Horse population. The mean number of alleles (N(A)) decreased more markedly with declining population sizes of German draught horse breeds (5.2-6.3) but did not reach the values of Hanoverian Warmblood (N(A) = 6.7). The coefficient of differentiation among the heavy horse breeds showed 11.6% of the diversity between the heavy horse breeds, as opposed to 21.2% between the other horse populations. The differentiation test revealed highly significant genetic differences among all draught horse breeds except the Mecklenburg and Saxon Thuringa Coldbloods. The Schleswig Draught Horse was the most distinct draught horse breed. In conclusion, the study demonstrated a clear distinction among the German draught horse breeds and even among breeds with a very short history of divergence like Rhenish German Draught Horse and its East German subpopulations Mecklenburg and Saxon Thuringa Coldblood.
Publication Date: 2004-07-22 PubMed ID: 15265065DOI: 10.1111/j.1365-2052.2004.01166.xGoogle Scholar: Lookup
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  • Comparative Study
  • Journal Article

Summary

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The research article investigates the genetic diversity across six German draught horse breeds, comparing these with wild, primitive, and riding horse breeds. The findings reveal notable genetic differences amongst the German draught horse breeds, despite similarities in population sizes.

Study Overview

  • The study looks into genetic diversity across various horse breeds, focusing on six German draught horse breeds: South German Coldblood, Rhenish German Draught Horse, Mecklenburg Coldblood, Saxon Thuringa Coldblood, Black Forest Horse, and Schleswig Draught Horse. These were compared with a group consisting of wild horse breed (Przewalski’s Horse), primitive horse breeds (Icelandic Horse, Sorraia Horse, Exmoor Pony) and riding horse breeds (Hanoverian Warmblood, Arabian).

Research Methods

  • Researchers used genotypic information derived from 30 microsatellite loci to make their comparisons. Microsatellite loci are regions of DNA that are helpful in determining genetic diversity.

Findings on Heterozygosity and Alleles

  • The study found that the average observed heterozygosity, or H(o) (a measure of genetic diversity in a population), was fairly similar among the heavy horse breeds, with values ranging from 0.64 to 0.71. However, significantly lower values were observed in the Hanoverian Warmblood or Icelandic Horse population.
  • As per the findings, the mean number of alleles (alternate forms of a gene) were also impacted by the population size; as the population size of German draught horse breeds declined, so did the mean number of alleles, although not to the extent seen in the Hanoverian Warmblood breed.

Findings on Genetic Differentiation

  • The research also calculated the coefficient of differentiation among the heavy horse breeds, with about 11.6% of diversity between the breeds. This percentage was lower when compared to the 21.2% diversity calculated between the other horse populations.
  • Significant genetic differences were identified among all draught horse breeds, with the exception of the Mecklenburg and Saxon Thuringa Coldbloods. The Schleswig Draught Horse was the most genetically distinct breed among the draught horses.

Conclusion

  • The study concluded with a clear demonstration of distinct genetic diversity across German draught horse breeds, including those with a short history of divergence like Rhenish German Draught Horse and its East German subpopulations Mecklenburg and Saxon Thuringa Coldblood.

Cite This Article

APA
Aberle KS, Hamann H, Drögemüller C, Distl O. (2004). Genetic diversity in German draught horse breeds compared with a group of primitive, riding and wild horses by means of microsatellite DNA markers. Anim Genet, 35(4), 270-277. https://doi.org/10.1111/j.1365-2052.2004.01166.x

Publication

ISSN: 0268-9146
NlmUniqueID: 8605704
Country: England
Language: English
Volume: 35
Issue: 4
Pages: 270-277

Researcher Affiliations

Aberle, K S
  • Institute of Animal Breeding and Genetics, School of Veterinary Medicine Hannover, Hannover, Germany.
Hamann, H
    Drögemüller, C
      Distl, O

        MeSH Terms

        • Animals
        • Evolution, Molecular
        • Gene Frequency
        • Genetic Carrier Screening
        • Genetic Variation
        • Genetics, Population
        • Germany
        • Horses / genetics
        • Microsatellite Repeats / genetics
        • Species Specificity

        Citations

        This article has been cited 25 times.
        1. Duderstadt S, Distl O. Insights into Genomic Patterns of Homozygosity in the Endangered Dülmen Wild Horse Population. Genes (Basel) 2025 Sep 8;16(9).
          doi: 10.3390/genes16091054pubmed: 41009997google scholar: lookup
        2. Sievers J, Distl O. Genomic Patterns of Homozygosity and Genetic Diversity in the Rhenish German Draught Horse. Genes (Basel) 2025 Mar 11;16(3).
          doi: 10.3390/genes16030327pubmed: 40149478google scholar: lookup
        3. Duderstadt S, Distl O. Influence of Sires on Population Substructure in Dülmen Wild Horses. Animals (Basel) 2024 Oct 9;14(19).
          doi: 10.3390/ani14192904pubmed: 39409853google scholar: lookup
        4. Duderstadt S, Distl O. Genetic Diversity and Population Structure of Dülmen Wild, Liebenthal and Polish Konik Horses in Comparison with Przewalski, Sorraia, German Draught and Riding Horses. Animals (Basel) 2024 Jul 31;14(15).
          doi: 10.3390/ani14152221pubmed: 39123746google scholar: lookup
        5. Sievers J, Distl O. The Estimation of Genetic Parameters for Chronic Progressive Lymphedema and Body Traits in the Rhenish German Draught Horse. Animals (Basel) 2024 Apr 18;14(8).
          doi: 10.3390/ani14081214pubmed: 38672362google scholar: lookup
        6. Orazymbetova Z, Ualiyeva D, Dossybayev K, Torekhanov A, Sydykov D, Mussayeva A, Baktybayev G. Genetic Diversity of Kazakhstani Equus caballus (Linnaeus, 1758) Horse Breeds Inferred from Microsatellite Markers. Vet Sci 2023 Sep 30;10(10).
          doi: 10.3390/vetsci10100598pubmed: 37888550google scholar: lookup
        7. Sievers J, Distl O. Prevalence of Chronic Progressive Lymphedema in the Rhenish German Draught Horse. Animals (Basel) 2023 Mar 9;13(6).
          doi: 10.3390/ani13060999pubmed: 36978540google scholar: lookup
        8. Elblinger E, Bokor J, Bokor Á, Altbäcker V, Nagy J, Szabó J, Sárdi B, Bâlteanu AV, Rónai Z, Rózsa L, Rátky J, Anton I, Zsolnai A. Parentage testing and looking for single nucleotide markers associated with antler quality in deer (Cervus elaphus). Arch Anim Breed 2022;65(3):267-274.
          doi: 10.5194/aab-65-267-2022pubmed: 36035877google scholar: lookup
        9. Ivanković A, Bittante G, Konjačić M, Kelava Ugarković N, Pećina M, Ramljak J. Evaluation of the Conservation Status of the Croatian Posavina Horse Breed Based on Pedigree and Microsatellite Data. Animals (Basel) 2021 Jul 18;11(7).
          doi: 10.3390/ani11072130pubmed: 34359258google scholar: lookup
        10. Merkies K, Paraschou G, McGreevy PD. Morphometric Characteristics of the Skull in Horses and Donkeys-A Pilot Study. Animals (Basel) 2020 Jun 8;10(6).
          doi: 10.3390/ani10061002pubmed: 32521777google scholar: lookup
        11. Lancioni H, Cardinali I, Giontella A, Antognoni MT, Miglio A. Mitochondrial DNA variation in the Italian Heavy Draught Horse. PeerJ 2020;8:e8996.
          doi: 10.7717/peerj.8996pubmed: 32461825google scholar: lookup
        12. Winton CL, McMahon R, Hegarty MJ, McEwan NR, Davies-Morel MCG, Morgan C, Nash DM. Genetic diversity within and between British and Irish breeds: The maternal and paternal history of native ponies. Ecol Evol 2020 Feb;10(3):1352-1367.
          doi: 10.1002/ece3.5989pubmed: 32076519google scholar: lookup
        13. Lim KS, Chang SS, Choi BH, Lee SH, Lee KT, Chai HH, Park JE, Park W, Lim D. Genome-Wide Analysis of Allele-Specific Expression Patterns in Seventeen Tissues of Korean Cattle (Hanwoo). Animals (Basel) 2019 Sep 26;9(10).
          doi: 10.3390/ani9100727pubmed: 31561539google scholar: lookup
        14. Castaneda C, Juras R, Khanshour A, Randlaht I, Wallner B, Rigler D, Lindgren G, Raudsepp T, Cothran EG. Population Genetic Analysis of the Estonian Native Horse Suggests Diverse and Distinct Genetics, Ancient Origin and Contribution from Unique Patrilines. Genes (Basel) 2019 Aug 20;10(8).
          doi: 10.3390/genes10080629pubmed: 31434327google scholar: lookup
        15. Metzger J, Karwath M, Tonda R, Beltran S, Águeda L, Gut M, Gut IG, Distl O. Runs of homozygosity reveal signatures of positive selection for reproduction traits in breed and non-breed horses. BMC Genomics 2015 Oct 9;16:764.
          doi: 10.1186/s12864-015-1977-3pubmed: 26452642google scholar: lookup
        16. Metzger J, Tonda R, Beltran S, Agueda L, Gut M, Distl O. Next generation sequencing gives an insight into the characteristics of highly selected breeds versus non-breed horses in the course of domestication. BMC Genomics 2014 Jul 4;15(1):562.
          doi: 10.1186/1471-2164-15-562pubmed: 24996778google scholar: lookup
        17. Janova E, Futas J, Klumplerova M, Putnova L, Vrtkova I, Vyskocil M, Frolkova P, Horin P. Genetic diversity and conservation in a small endangered horse population. J Appl Genet 2013 Aug;54(3):285-92.
          doi: 10.1007/s13353-013-0151-3pubmed: 23649723google scholar: lookup
        18. Petersen JL, Mickelson JR, Cothran EG, Andersson LS, Axelsson J, Bailey E, Bannasch D, Binns MM, Borges AS, Brama P, da Câmara Machado A, Distl O, Felicetti M, Fox-Clipsham L, Graves KT, Guérin G, Haase B, Hasegawa T, Hemmann K, Hill EW, Leeb T, Lindgren G, Lohi H, Lopes MS, McGivney BA, Mikko S, Orr N, Penedo MC, Piercy RJ, Raekallio M, Rieder S, Røed KH, Silvestrelli M, Swinburne J, Tozaki T, Vaudin M, M Wade C, McCue ME. Genetic diversity in the modern horse illustrated from genome-wide SNP data. PLoS One 2013;8(1):e54997.
          doi: 10.1371/journal.pone.0054997pubmed: 23383025google scholar: lookup
        19. Georgescu SE, Manea MA, Dudu A, Costache M. Phylogenetic relationships of the mangalitsa Swine breed inferred from mitochondrial DNA variation. Int J Mol Sci 2012;13(7):8467-8481.
          doi: 10.3390/ijms13078467pubmed: 22942714google scholar: lookup
        20. Bömcke E, Gengler N, Cothran EG. Genetic variability in the Skyros pony and its relationship with other Greek and foreign horse breeds. Genet Mol Biol 2011 Jan;34(1):68-76.
        21. Warmuth V, Eriksson A, Bower MA, Cañon J, Cothran G, Distl O, Glowatzki-Mullis ML, Hunt H, Luís C, do Mar Oom M, Yupanqui IT, Ząbek T, Manica A. European domestic horses originated in two holocene refugia. PLoS One 2011 Mar 30;6(3):e18194.
          doi: 10.1371/journal.pone.0018194pubmed: 21479181google scholar: lookup
        22. Mittmann EH, Mömke S, Distl O. Whole-genome scan identifies quantitative trait loci for chronic pastern dermatitis in German draft horses. Mamm Genome 2010 Feb;21(1-2):95-103.
          doi: 10.1007/s00335-009-9244-zpubmed: 20039044google scholar: lookup
        23. Leroy G, Callède L, Verrier E, Mériaux JC, Ricard A, Danchin-Burge C, Rognon X. Genetic diversity of a large set of horse breeds raised in France assessed by microsatellite polymorphism. Genet Sel Evol 2009 Jan 5;41(1):5.
          doi: 10.1186/1297-9686-41-5pubmed: 19284689google scholar: lookup
        24. Behl R, Behl J, Gupta N, Gupta SC, Ahlawat SP, Ragnekar M, Ahmed Z. Genetic characterization of Zanskari breed of horse. J Genet 2006 Dec;85(3):199-203.
          doi: 10.1007/BF02935331pubmed: 17406094google scholar: lookup
        25. Iwańczyk E, Juras R, Cholewiński G, Cothran EG. Genetic structure and phylogenetic relationships of the Polish Heavy horse. J Appl Genet 2006;47(4):353-9.
          doi: 10.1007/BF03194645pubmed: 17132900google scholar: lookup