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Genetic diversity of Thoroughbred horse population from Bosnia and Herzegovina based on 17 microsatellite markers.

Abstract: The focus of this study was on genetic diversity of TB horse population raised in B&H. Genomic DNA was genotyped by using 17 microsatellite markers. A total of 103 alleles were detected. The average number of alleles per locus was 6.059 and effective number of alleles was 3.293. Means of observed and expected heterozygosity were calculated 0.645 and 0.696, respectively. The average PIC values was 0.649 and inbreeding coefficient was 0.090. Based on all observed parameters, ASB2 locus showed the highest genetic diversity while locus HMS2 was the least diverse. These results suggest that the population of TB horses from B&H is not affected by substantial loss of genetic diversity, indicating the presence of reasonably high level of genetic variability.
Publication Date: 2016-09-01 PubMed ID: 29786993
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  • Journal Article

Summary

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The research article is a study of the genetic diversity of Thoroughbred (TB) horse populations in Bosnia and Herzegovina (B&H), ascertained through the examination of 17 different microsatellite markers.

Introduction

  • The study is focused on exploring the genetic diversity of Thoroughbred horse populations from Bosnia and Herzegovina (B&H). Thoroughbred horses are a specific breed, best known for their use in horse racing.
  • To ascertain this diversity, the genomes of these horses were studied using 17 different microsatellite markers. Microsatellites are simple, repeating sequences in the DNA that are used in genetic studies as markers due to their high variability among individuals within a population.

Methods

  • In the study, 103 different alleles were identified. Alleles are variations of a gene, and the number indicates the diversity of genes within the population.
  • The average number of different alleles per locus (location of a gene) was 6.059 and the effective number of alleles, accounting for their frequency, was 3.293. This shows a relatively high level of genetic diversity within the chosen genes.

Results

  • The heterozygosity of the population was calculated, with observed heterozygosity at 0.645 and expected heterozygosity at 0.696. Heterozygosity is a measure of genetic diversity within a population, with higher scores indicating more diversity.
  • The polymorphic information content (PIC) value was reported as 0.649, another measure of genetic variability, while the inbreeding coefficient was 0.090. This low inbreeding coefficient suggests that there is not a significant amount of breeding between closely related individuals in this population.
  • Of all the loci (plural of locus) studied, ASB2 showed the highest genetic diversity while HMS2 was the least diverse.

Conclusion

  • Based on these results, the research study suggests that the Thoroughbred horse population from Bosnia and Herzegovina is not affected by a substantial loss of genetic diversity. In other words, there appears to be a high level of genetic variability within these populations, which is generally considered beneficial for the health and longevity of the population.

Cite This Article

APA
Rukavian D, Hasanbasic D, Ramic J, Zahirovic A, Ajanovic A, Beganovic K, Durmic-Pasic A, Kalamujic B, Pojskic N. (2016). Genetic diversity of Thoroughbred horse population from Bosnia and Herzegovina based on 17 microsatellite markers. Jpn J Vet Res, 64(3), 215-220.

Publication

ISSN: 0047-1917
NlmUniqueID: 0376567
Country: Japan
Language: English
Volume: 64
Issue: 3
Pages: 215-220

Researcher Affiliations

Rukavian, Dunja
    Hasanbasic, Danica
      Ramic, Jasmin
        Zahirovic, Amir
          Ajanovic, Atifa
            Beganovic, Kemal
              Durmic-Pasic, Adaleta
                Kalamujic, Belma
                  Pojskic, Naris

                    MeSH Terms

                    • Alleles
                    • Animals
                    • Bosnia and Herzegovina
                    • Female
                    • Genetic Variation
                    • Horses / genetics
                    • Inbreeding
                    • Male
                    • Microsatellite Repeats / genetics

                    Citations

                    This article has been cited 1 times.
                    1. Kalashnikov V, Khrabrova L, Blohina N, Zaitcev A, Kalashnikova T. Dynamics of the Inbreeding Coefficient and Homozygosity in Thoroughbred Horses in Russia. Animals (Basel) 2020 Jul 17;10(7).
                      doi: 10.3390/ani10071217pubmed: 32708952google scholar: lookup