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Cytogenetic and genome research2004; 102(1-4); 201-206; doi: 10.1159/000075749

Genetic mapping of GBE1 and its association with glycogen storage disease IV in American Quarter horses.

Abstract: Comparative biochemical and histopathological data suggest that a deficiency in the glycogen branching enzyme (GBE) is responsible for a fatal neonatal disease in Quarter Horse foals that closely resembles human glycogen storage disease type IV (GSD IV). Identification of DNA markers closely linked to the equine GBE1 gene would assist us in determining whether a mutation in this gene leads to the GSD IV-like condition. FISH using BAC clones as probes assigned the equine GBE1 gene to a marker deficient region of ECA26q12-->q13. Four other genes, ROBO2, ROBO1, POU1F1, and HTR1F, that flank GBE1 within a 10-Mb segment of HSA3p12-->p11, were tightly linked to equine GBE1 when analyzed on the Texas A&M University 5000 rad equine radiation hybrid panel, while the GLB1, MITF, RYBP, and PROS1 genes that flank this 10-Mb interval were not linked with markers in the GBE1 group. A polymorphic microsatellite (GBEms1) in a GBE1 BAC clone was then identified and genetically mapped to ECA26 on the Animal Health Trust full-sibling equine reference family. All Quarter Horse foals affected with GSD IV were homozygous for an allele of GBEms1, as well as an allele of the most closely linked microsatellite marker, while a control horse population showed significant allelic variation with these markers. This data provides strong molecular genetic support for the candidacy of the GBE1 locus in equine GSD IV.
Publication Date: 2004-02-19 PubMed ID: 14970703DOI: 10.1159/000075749Google Scholar: Lookup
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  • Journal Article
  • Research Support
  • Non-U.S. Gov't
  • Research Support
  • U.S. Gov't
  • Non-P.H.S.
  • Research Support
  • U.S. Gov't
  • P.H.S.

Summary

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The research investigated the link between the GBE1 gene, involved in the production of the glycogen branching enzyme, and glycogen storage disease type IV (GSD IV) in American Quarter horses. The team found that affected horses were homozygous for alleles of a specific microsatellite within GBE1, providing strong evidence of the gene’s role in the disease.

Understanding Glycogen Storage Disease IV and Glycogen Branching Enzyme

  • Glycogen storage disease type IV (GSD IV) is a fatal genetic disorder that hinders the body’s ability to store glucose as glycogen for energy use.
  • The disease is believed to be caused by a lack of the glycogen branching enzyme (GBE)—an enzyme responsible for the proper structure and storage of glycogen, similar to what has been found in humans.
  • In horses, this deficiency presents itself as a neonatal disease, which has parallels with human GSD IV.
  • The researchers aim to identify DNA markers associated with the equine GBE1 gene, which is responsible for producing GBE in horses.

Mapping the GBE1 Gene

  • The team utilized a technique known as Fluorescence In Situ Hybridization (FISH) to map the location of the GBE1 gene on the horse chromosome—ECA26q12 to q13.
  • By using bacterial artificial chromosomes (BAC) as probes, the researchers were able to accurately pinpoint the gene’s location.
  • Four genes—ROBO2, ROBO1, POU1F1, HTR1F—that were found within the same segment as GBE1 on the human chromosome also displayed a close linkage to the equine GBE1 gene.

Identifying a Genetic Marker for GSD IV

  • Researchers identified a polymorphic microsatellite—a repeating DNA sequence—within the GBE1 gene of the horses, termed GBEms1.
  • Mapping this microsatellite on the horse chromosome suggested it was a genetic marker for GBE-related GSD IV in horses.
  • All American Quarter Horse foals affected by GSD IV were homozygous for this microsatellite, indicating an inherited genetic characteristic for this disease.
  • This suggests a strong association between the inherited traits of GBEms1 and GSD IV in American Quarter Horses.

Conclusion

  • The research provides compelling molecular genetic evidence that GBE1 is associated with GSD IV in American Quarter Horses, deepening our understanding of this debilitating disease and possibly paving the way for the development of diagnostic tools or even treatments.

Cite This Article

APA
Ward TL, Valberg SJ, Lear TL, Guérin G, Milenkovic D, Swinburne JE, Binns MM, Raudsepp T, Skow L, Chowdhary BP, Mickelson JR. (2004). Genetic mapping of GBE1 and its association with glycogen storage disease IV in American Quarter horses. Cytogenet Genome Res, 102(1-4), 201-206. https://doi.org/10.1159/000075749

Publication

ISSN: 1424-859X
NlmUniqueID: 101142708
Country: Switzerland
Language: English
Volume: 102
Issue: 1-4
Pages: 201-206

Researcher Affiliations

Ward, T L
  • Department of Veterinary PathoBiology, University of Minnesota, St Paul, MN 55108, USA.
Valberg, S J
    Lear, T L
      Guérin, G
        Milenkovic, D
          Swinburne, J E
            Binns, M M
              Raudsepp, T
                Skow, L
                  Chowdhary, B P
                    Mickelson, J R

                      MeSH Terms

                      • 1,4-alpha-Glucan Branching Enzyme / genetics
                      • Alleles
                      • Americas
                      • Animals
                      • Chromosome Mapping / methods
                      • Chromosome Mapping / veterinary
                      • Genetic Linkage / genetics
                      • Glycogen Storage Disease Type IV / genetics
                      • Glycogen Storage Disease Type IV / veterinary
                      • Horse Diseases / genetics
                      • Horses / genetics
                      • In Situ Hybridization, Fluorescence / methods
                      • In Situ Hybridization, Fluorescence / veterinary
                      • Microsatellite Repeats / genetics
                      • Radiation Hybrid Mapping / methods
                      • Radiation Hybrid Mapping / veterinary
                      • Sequence Analysis, DNA / methods
                      • Sequence Analysis, DNA / veterinary

                      Grant Funding

                      • T32 AR007612 / NIAMS NIH HHS

                      Citations

                      This article has been cited 6 times.
                      1. Pinn TL, Divers TJ, Southard T, De Bernardis NP, Wakshlag JJ, Valberg S. Persistent hypoglycemia associated with lipid storage myopathy in a paint foal. J Vet Intern Med 2018 Jul;32(4):1442-1446.
                        doi: 10.1111/jvim.15218pubmed: 29957835google scholar: lookup
                      2. Brosnahan MM, Brooks SA, Antczak DF. Equine clinical genomics: A clinician's primer. Equine Vet J 2010 Oct;42(7):658-70.
                      3. Chowdhary BP, Raudsepp T. The horse genome derby: racing from map to whole genome sequence. Chromosome Res 2008;16(1):109-27.
                        doi: 10.1007/s10577-008-1204-zpubmed: 18274866google scholar: lookup
                      4. Ward TL, Valberg SJ, Adelson DL, Abbey CA, Binns MM, Mickelson JR. Glycogen branching enzyme (GBE1) mutation causing equine glycogen storage disease IV. Mamm Genome 2004 Jul;15(7):570-7.
                        doi: 10.1007/s00335-004-2369-1pubmed: 15366377google scholar: lookup
                      5. Koeberl DD, Koch RL, Lim JA, Brooks ED, Arnson BD, Sun B, Kishnani PS. Gene therapy for glycogen storage diseases. J Inherit Metab Dis 2024 Jan;47(1):93-118.
                        doi: 10.1002/jimd.12654pubmed: 37421310google scholar: lookup
                      6. Raudsepp T, Lee EJ, Kata SR, Brinkmeyer C, Mickelson JR, Skow LC, Womack JE, Chowdhary BP. Exceptional conservation of horse-human gene order on X chromosome revealed by high-resolution radiation hybrid mapping. Proc Natl Acad Sci U S A 2004 Feb 24;101(8):2386-91.
                        doi: 10.1073/pnas.0308513100pubmed: 14983019google scholar: lookup