Analyze Diet
Genetics and molecular research : GMR2012; 11(2); 881-890; doi: 10.4238/2012.April.10.4

Genetic variability in local Brazilian horse lines using microsatellite markers.

Abstract: Genetic variability at 11 microsatellite markers was analyzed in five naturalized/local Brazilian horse breeds or genetic groups. Blood samples were collected from 328 animals of the breeds Campeira (Santa Catarina State), Lavradeira (Roraima State), Pantaneira (Pantanal Mato-Grossense), Mangalarga Marchador (Minas Gerais State), as well as the genetic group Baixadeiro (Maranhão State), and the exotic breeds English Thoroughbred and Arab. We found significant genetic variability within evaluated microsatellite loci, with observed heterozygosis varying between 0.426 and 0.768 and polymorphism information content values of 0.751 to 0.914. All breeds showed high inbreeding coefficients and were not in Hardy-Weinberg equilibrium. The smallest genetic distance was seen between the Pantaneira and Arab breeds. The principal component analyzes and Bayesian approach demonstrated that the exotic breeds have had a significant influence on the genetic formation of the local breeds, with introgression of English Throroughbred in Pantaneira and Lavradeira, as well as genetic proximity between the Arab, Pantaneira and Mangalarga Marchador populations. This study shows the need to conserve traits acquired by naturalized horse breeds over centuries of natural selection in Brazil due to the genetic uniqueness of each group, suggesting a reduced gene flow between them. These results reinforce the need to include these herds in animal genetic resource conservation programs to maximize the genetic variability and conserve useful allele combinations.
Publication Date: 2012-04-10 PubMed ID: 22576916DOI: 10.4238/2012.April.10.4Google Scholar: Lookup
The Equine Research Bank provides access to a large database of publicly available scientific literature. Inclusion in the Research Bank does not imply endorsement of study methods or findings by Mad Barn.
  • Journal Article
  • Research Support
  • Non-U.S. Gov't

Summary

This research summary has been generated with artificial intelligence and may contain errors and omissions. Refer to the original study to confirm details provided. Submit correction.

The research focuses on evaluating genetic variability in different Brazilian horse breeds using microsatellite markers. The study identifies significant genetic distinctiveness within the breeds which suggests the need for their preservation due to their unique genetic traits.

Methodology

  • The researchers analyzed the genetic variability of five naturalized or local Brazilian horse breeds – Campeira, Lavradeira, Pantaneira, Mangalarga Marchador and the genetic group Baixadeiro, and two exotic breeds – English Thoroughbred and Arab.
  • They used 11 microsatellite markers for this purpose and collected blood samples from 328 horses representing these breeds.

Findings

  • The study discovered substantial genetic variability between these microsatellite loci. The observed heterozygosis fluctuated between 0.426 and 0.768 while polymorphism information content values ranged between 0.751 and 0.914.
  • All the breeds displayed high inbreeding coefficients and were not in Hardy-Weinberg equilibrium, signifying that their genetic structure does not reflect random mating or is influenced by other evolutionary forces.
  • The smallest genetic distance was seen between the Pantaneira and Arab breeds, indicating a certain level of genetic similarity or shared ancestry between these breeds.

Implications

  • The principal component analyses and Bayesian approach demonstrated the exotic breeds, specifically the English Thoroughbred and Arab, have significantly influenced the genetic composition of the local breeds.
  • It was also shown these exotic breeds have been introgressed into the Pantaneira and Lavradeira breeds, and there was a distinct genetic proximity between the Arab, Pantaneira and Mangalarga Marchador populations.
  • The study stresses that centuries of natural selection in Brazil make these local breeds genetically unique, calling for the need to conserve these unique genetic attributes.
  • This uniqueness suggests a reduced gene flow between these different breeds, which means they have evolved distinctly with limited mixing of genes, making them genetically distinctive.
  • The results advocate for the inclusion of these horse breeds in animal genetic resource conservation programs to maximize their genetic variability and to conserve useful allele combinations that can be utilized in future breeding programs.

Cite This Article

APA
Silva AC, Paiva SR, Albuquerque MS, Egito AA, Santos SA, Lima FC, Castro ST, Mariante AS, Correa PS, McManus CM. (2012). Genetic variability in local Brazilian horse lines using microsatellite markers. Genet Mol Res, 11(2), 881-890. https://doi.org/10.4238/2012.April.10.4

Publication

ISSN: 1676-5680
NlmUniqueID: 101169387
Country: Brazil
Language: English
Volume: 11
Issue: 2
Pages: 881-890

Researcher Affiliations

Silva, A C M
  • Laboratório de Genética Animal, Embrapa Recursos Genéticos e Biotecnologia, Brasília, DF, Brasil.
Paiva, S R
    Albuquerque, M S M
      Egito, A A
        Santos, S A
          Lima, F C
            Castro, S T
              Mariante, A S
                Correa, P S
                  McManus, C M

                    MeSH Terms

                    • Animals
                    • Base Sequence
                    • Brazil
                    • Genetic Markers
                    • Genetic Variation
                    • Heterozygote
                    • Horses / genetics
                    • Microsatellite Repeats / genetics
                    • Molecular Sequence Data
                    • Polymerase Chain Reaction

                    Citations

                    This article has been cited 4 times.
                    1. de Faria DA, do Prado Paim T, Dos Santos CA, Paiva SR, Nogueira MB, McManus C. Selection signatures for heat tolerance in Brazilian horse breeds. Mol Genet Genomics 2022 Mar;297(2):449-462.
                      doi: 10.1007/s00438-022-01862-wpubmed: 35150300google scholar: lookup
                    2. Ivanković A, Bittante G, Konjačić M, Kelava Ugarković N, Pećina M, Ramljak J. Evaluation of the Conservation Status of the Croatian Posavina Horse Breed Based on Pedigree and Microsatellite Data. Animals (Basel) 2021 Jul 18;11(7).
                      doi: 10.3390/ani11072130pubmed: 34359258google scholar: lookup
                    3. Lancioni H, Cardinali I, Giontella A, Antognoni MT, Miglio A. Mitochondrial DNA variation in the Italian Heavy Draught Horse. PeerJ 2020;8:e8996.
                      doi: 10.7717/peerj.8996pubmed: 32461825google scholar: lookup
                    4. Ianella P, Albuquerque MSM, Paiva SR, Egito AA, Almeida LD, Sereno FTPS, Carvalho LFR, Mariante AS, McManus CM. D-loop haplotype diversity in Brazilian horse breeds. Genet Mol Biol 2017 Jul-Sep;40(3):604-609.