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The Journal of antimicrobial chemotherapy2019; 75(2); 292-295; doi: 10.1093/jac/dkz459

Identification of a mecA/mecC-positive MRSA ST1-t127 isolate from a racehorse in Japan.

Abstract: MRSA is a known pathogen that affects horses. We investigated an equine MRSA isolate for potential antimicrobial resistance genes, classified the staphylococcal cassette chromosome mec (SCCmec) and identified the strain-specific dissemination in the horse community based on WGS. WGS, using short-read sequencing, and subsequent long-read sequencing by hybrid assembly, was conducted to obtain a complete genome sequence. Pairwise sequence alignment of relative SCCmec sequences and core-genome phylogenetic analysis were performed to highlight transmission routes of the SCCmec and MRSA strain-specific lineages. In 2018, we isolated the MRSA JRA307 strain from the pus of a wound on a racehorse and the complete genome sequence suggests that it is a clinically relevant pvl-negative ST1-t127 MRSA that harbours both mecA and mecC on SCCmec-307. SCCmec-307 exhibited marked sequence identity to the previously reported SCCmec-mecC in the Staphylococcus sciuri GVGS2 strain isolated from cattle. The JRA307 mecC gene was classified as a mecC allotype of S. sciuri rather than that of Staphylococcus aureus. We demonstrated the complete genome sequence of equine isolate JRA307, which is a clinically relevant MRSA harbouring mecA and mecC on SCCmec-307. The finding of mecC MRSA suggests a possible SCCmec transmission between distinct staphylococcal species. To the best of our knowledge, this is the first report of mecC detection in Japan.
Publication Date: 2019-11-07 PubMed ID: 31691809DOI: 10.1093/jac/dkz459Google Scholar: Lookup
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  • Journal Article
  • Research Support
  • Non-U.S. Gov't

Summary

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The research article discusses an in-depth study carried out on an MRSA isolate from a racehorse in Japan to ascertain potential antimicrobial resistance genes. It aims to provide a greater understanding of the probabilities of SCCmec transmission across different staphylococcal species.

Objective of the Research

  • The main goal of this research was to study an equine MRSA isolate for potential antimicrobial resistance genes. The researchers achieved this by classifying the staphylococcal cassette chromosome mec (SCCmec) through Whole Genome Sequencing (WGS).

Research Methodology

  • The researchers used WGS coupled with short-read sequencing and subsequent long-read sequencing by hybrid assembly. These methods helped obtain a complete genome sequence — a necessity for effective research.
  • The team performed pairwise sequence alignment of corresponding SCCmec sequences and conducted a core-genome phylogenetic analysis. The purpose of these steps was to identify transmission routes of the SCCmec and MRSA strain-specific lineages.

Research Findings

  • In 2018, the team isolated the MRSA JRA307 strain from a wound’s pus on a racehorse. Through analysis, it was determined that the complete genome sequence of this strain is similar to a clinically relevant pvl-negative ST1-t127 MRSA, known to harbor both mecA and mecC on SCCmec-307.
  • SCCmec-307 sequence shared significant identity with previously reported SCCmec-mecC from Staphylococcus sciuri GVGS2 strain originating from cattle.
  • The researchers also discovered that the JRA307 mecC gene was more similar to a mecC allotype of S. sciuri as opposed to Staphylococcus aureus.
  • Through the investigation, they successfully showcased the complete genome sequence of equine isolate JRA307 — another clinically significant MRSA housing both mecA and mecC on SCCmec-307.

Significance of the Study

  • The discovery of mecC MRSA suggests a possible SCCmec transmission route between distinct staphylococcal species, expanding our knowledge about this type of transfer.
  • Furthermore, as per the researchers’ claim, this study marks the first detection of mecC in Japan, hence paving the way for advances in its local healthcare sector.

Cite This Article

APA
Sekizuka T, Niwa H, Kinoshita Y, Uchida-Fujii E, Inamine Y, Hashino M, Kuroda M. (2019). Identification of a mecA/mecC-positive MRSA ST1-t127 isolate from a racehorse in Japan. J Antimicrob Chemother, 75(2), 292-295. https://doi.org/10.1093/jac/dkz459

Publication

ISSN: 1460-2091
NlmUniqueID: 7513617
Country: England
Language: English
Volume: 75
Issue: 2
Pages: 292-295

Researcher Affiliations

Sekizuka, Tsuyoshi
  • Pathogen Genomics Center, National Institute of Infectious Diseases, 1-23-1 Toyama, Shinjuku, Tokyo, Japan.
Niwa, Hidekazu
  • Microbiology Division, Equine Research Institute, Japan Racing Association, 1400-4 Shiba, Shimotsuke, Tochigi, Japan.
Kinoshita, Yuta
  • Microbiology Division, Equine Research Institute, Japan Racing Association, 1400-4 Shiba, Shimotsuke, Tochigi, Japan.
Uchida-Fujii, Eri
  • Microbiology Division, Equine Research Institute, Japan Racing Association, 1400-4 Shiba, Shimotsuke, Tochigi, Japan.
Inamine, Yuba
  • Pathogen Genomics Center, National Institute of Infectious Diseases, 1-23-1 Toyama, Shinjuku, Tokyo, Japan.
Hashino, Masanori
  • Pathogen Genomics Center, National Institute of Infectious Diseases, 1-23-1 Toyama, Shinjuku, Tokyo, Japan.
Kuroda, Makoto
  • Pathogen Genomics Center, National Institute of Infectious Diseases, 1-23-1 Toyama, Shinjuku, Tokyo, Japan.

MeSH Terms

  • Animals
  • Anti-Bacterial Agents / pharmacology
  • Bacterial Proteins / genetics
  • Genome, Bacterial
  • Horses / microbiology
  • Japan
  • Methicillin-Resistant Staphylococcus aureus / genetics
  • Methicillin-Resistant Staphylococcus aureus / isolation & purification
  • Penicillin-Binding Proteins / genetics
  • Phylogeny
  • Staphylococcal Infections / veterinary

Citations

This article has been cited 12 times.
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