Karyotypic relationships of horses and zebras: results of cross-species chromosome painting.
Abstract: Complete sets of chromosome-specific painting probes, derived from flow-sorted chromosomes of human (HSA), Equus caballus (ECA) and Equus burchelli (EBU) were used to delineate conserved chromosomal segments between human and Equus burchelli, and among four equid species, E. przewalskii (EPR), E. caballus, E. burchelli and E. zebra hartmannae (EZH) by cross-species chromosome painting. Genome-wide comparative maps between these species have been established. Twenty-two human autosomal probes revealed 48 conserved segments in E. burchelli. The adjacent segment combinations HSA3/21, 7/16p, 16q/19q, 14/15, 12/22 and 4/8, presumed ancestral syntenies for all eutherian mammals, were also found conserved in E. burchelli. The comparative maps of equids allow for the unequivocal characterization of chromosomal rearrangements that differentiate the karyotypes of these equid species. The karyotypes of E. przewalskii and E. caballus differ by one Robertsonian translocation (ECA5 = EPR23 + EPR24); numerous Robertsonian translocations and tandem fusions and several inversions account for the karyotypic differences between the horses and zebras. Our results shed new light on the karyotypic evolution of Equidae.
Copyright 2003 S. Karger AG, Basel
Publication Date: 2004-02-19 PubMed ID: 14970709DOI: 10.1159/000075755Google Scholar: Lookup
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- Comparative Study
- Journal Article
- Research Support
- Non-U.S. Gov't
Summary
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This research study sheds light on the genetic relationships between horses and zebras by using chromosome-specific painting probes. The researchers were able to identify and track chromosomal arrangements, revealing differences and similarities among these species, providing valuable insights on their karyotypic evolution.
Methodology
- The researchers used complete sets of chromosome-specific painting probes, which originated from flow-sorted chromosomes of humans (HSA), Equus caballus (ECA), and Equus burchelli (EBU).
- These probes were used to define conserved chromosomal segments, i.e., segments that remained unaltered across the species.
- Segments were traced between human and Equus burchelli, as well as among four equid species – E. przewalskii (EPR), E. caballus, E. burchelli, and E. zebra hartmannae (EZH).
Findings
- The study established genome-wide comparative maps between these species, highlighting 48 conserved segments in E. burchelli using twenty-two human autosomal probes.
- Some of the identified conserved adjacent segment combinations are presumably ancestral syntenies, suggesting they likely existed in the common ancestor of all placental mammals.
Implications
- The clear comparative maps among equids facilitated the unambiguous identification of chromosomal rearrangements differentiating the karyotypes of these equid species.
- The karyotypes of E. przewalskii and E. caballus differ by a Robertsonian translocation – a rearrangement involving the fusion of two certain types of chromosomes.
- In contrast, numerous Robertsonian translocations, tandem fusions and a few inversions account for the major differences between the karyotypes of horses and zebras.
- The results from this research offer fresh and significant insights into the karyotypic evolution of Equidae – the taxonomic family consisting of horses, donkeys, and zebras.
Cite This Article
APA
Yang F, Fu B, O'Brien PC, Robinson TJ, Ryder OA, Ferguson-Smith MA.
(2004).
Karyotypic relationships of horses and zebras: results of cross-species chromosome painting.
Cytogenet Genome Res, 102(1-4), 235-243.
https://doi.org/10.1159/000075755 Publication
Researcher Affiliations
- Centre for Veterinary Science, University of Cambridge, Cambridge, UK. fy@mole.bio.cam.ac.uk
MeSH Terms
- Animals
- Animals, Domestic / genetics
- Animals, Wild / genetics
- Cell Line
- Chromosome Banding / methods
- Chromosome Banding / veterinary
- Chromosome Painting / methods
- Chromosome Painting / veterinary
- Chromosomes / genetics
- DNA Probes / genetics
- Equidae / genetics
- Genome
- Horses / genetics
- Humans
- Karyotyping / veterinary
- Metaphase / genetics
- Sequence Homology, Nucleic Acid
- Species Specificity
- Translocation, Genetic / genetics
Citations
This article has been cited 22 times.- Piras FM, Cappelletti E, Abdelgadir WA, Salamon G, Vignati S, Santagostino M, Sola L, Nergadze SG, Giulotto E. A Satellite-Free Centromere in Equus przewalskii Chromosome 10. Int J Mol Sci 2023 Feb 18;24(4).
- Turghan MA, Jiang Z, Niu Z. An Update on Status and Conservation of the Przewalski's Horse (Equus ferus przewalskii): Captive Breeding and Reintroduction Projects. Animals (Basel) 2022 Nov 15;12(22).
- Iannuzzi A, Pereira J, Iannuzzi C, Fu B, Ferguson-Smith M. Pooling strategy and chromosome painting characterize a living zebroid for the first time. PLoS One 2017;12(7):e0180158.
- Heng HH, Regan SM, Liu G, Ye CJ. Why it is crucial to analyze non clonal chromosome aberrations or NCCAs?. Mol Cytogenet 2016;9:15.
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- Trifonov VA, Giovannotti M, O'Brien PC, Wallduck M, Lovell F, Rens W, Parise-Maltempi PP, Caputo V, Ferguson-Smith MA. Chromosomal evolution in Gekkonidae. I. Chromosome painting between Gekko and Hemidactylus species reveals phylogenetic relationships within the group. Chromosome Res 2011 Oct;19(7):843-55.
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- Piras FM, Nergadze SG, Magnani E, Bertoni L, Attolini C, Khoriauli L, Raimondi E, Giulotto E. Uncoupling of satellite DNA and centromeric function in the genus Equus. PLoS Genet 2010 Feb 12;6(2):e1000845.
- Musilova P, Kubickova S, Horin P, Vodicka R, Rubes J. Karyotypic relationships in Asiatic asses (kulan and kiang) as defined using horse chromosome arm-specific and region-specific probes. Chromosome Res 2009;17(6):783-90.
- Kulemzina AI, Trifonov VA, Perelman PL, Rubtsova NV, Volobuev V, Ferguson-Smith MA, Stanyon R, Yang F, Graphodatsky AS. Cross-species chromosome painting in Cetartiodactyla: reconstructing the karyotype evolution in key phylogenetic lineages. Chromosome Res 2009;17(3):419-36.
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- Pardini AT, O'Brien PC, Fu B, Bonde RK, Elder FF, Ferguson-Smith MA, Yang F, Robinson TJ. Chromosome painting among Proboscidea, Hyracoidea and Sirenia: support for Paenungulata (Afrotheria, Mammalia) but not Tethytheria. Proc Biol Sci 2007 May 22;274(1615):1333-40.
- Romanenko SA, Volobouev VT, Perelman PL, Lebedev VS, Serdukova NA, Trifonov VA, Biltueva LS, Nie W, O'Brien PC, Bulatova NSh, Ferguson-Smith MA, Yang F, Graphodatsky AS. Karyotype evolution and phylogenetic relationships of hamsters (Cricetidae, Muroidea, Rodentia) inferred from chromosomal painting and banding comparison. Chromosome Res 2007;15(3):283-97.
- Dobigny G, Yang F, O'Brien PC, Volobouev V, Kovács A, Pieczarka JC, Ferguson-Smith MA, Robinson TJ. Low rate of genomic repatterning in Xenarthra inferred from chromosome painting data. Chromosome Res 2005;13(7):651-63.
- Brinkmeyer-Langford C, Raudsepp T, Lee EJ, Goh G, Schäffer AA, Agarwala R, Wagner ML, Tozaki T, Skow LC, Womack JE, Mickelson JR, Chowdhary BP. A high-resolution physical map of equine homologs of HSA19 shows divergent evolution compared with other mammals. Mamm Genome 2005 Aug;16(8):631-49.
- Yang F, Fu B, O'Brien PC, Nie W, Ryder OA, Ferguson-Smith MA. Refined genome-wide comparative map of the domestic horse, donkey and human based on cross-species chromosome painting: insight into the occasional fertility of mules. Chromosome Res 2004;12(1):65-76.
- Cappelletti E, Piras FM, Biundo M, Bellone RR, Finno CJ, Kalbfleisch TS, Petersen JL, Nergadze SG, Giulotto E. CENP-A and centromere evolution in equids. Chromosome Res 2025 Jun 30;33(1):13.
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