Mapping the sequences that mediate interaction of the equine herpesvirus 1 immediate-early protein and human TFIIB.
Abstract: The sole immediate-early (IE) gene of equine herpesvirus 1 encodes a 1,487-amino-acid (aa) regulatory phosphoprotein that independently activates expression of early viral genes. Coimmunoprecipitation assays demonstrated that the IE protein physically interacts with the general transcription factor TFIIB. Using a variety of protein-binding assays that employed a panel of IE truncation and deletion mutants expressed as in vitro-synthesized or glutathione S-transferase fusion proteins, we mapped a TFIIB-binding domain to aa 407 to 757 of the IE protein. IE mutants carrying internal deletions of aa 426 to 578 and 621 to 757 were partially defective for TFIIB binding, indicating that aa 407 to 757 may harbor more than one TFIIB-binding domain. The interaction between the IE protein and TFIIB is of physiological importance, as evidenced by transient-cotransfection assays. Partial deletion of the TFIIB-binding domain within the IE protein inhibited its ability to activate expression of the viral thymidine kinase gene, a representative early promoter, and of the IR5 gene, a representative late promoter, by greater than 20 and 50%, respectively. These results indicate that the interaction of the IE protein with TFIIB is necessary for its full transactivation function and that the IE-TFIIB interaction may be part of the mechanism by which the IE protein activates transcription.
Publication Date: 2001-10-03 PubMed ID: 11581390PubMed Central: PMC114596DOI: 10.1128/JVI.75.21.10219-10230.2001Google Scholar: Lookup
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- P.H.S.
Summary
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The research discusses the identification of the sequences in equine herpesvirus 1 immediate-early (IE) gene interacting with human TFIIB. Through various assays, the researchers established that the interaction is important for activating the expression of some early and late viral genes.
Understanding the Immediate-Early Protein and TFIIB Interaction
- The study examines the IE gene of the equine herpesvirus 1, which encodes a complex regulatory phosphoprotein made up of 1,487 amino acids. This protein is crucial as it independently triggers the expression of early viral genes.
- Researchers used coimmunoprecipitation assays to demonstrate that the IE protein physically interacts with a general transcription factor, TFIIB, in human cells. Essentially, they found that the IE protein binds with TFIIB, revealing a potentially important mechanism in the viral lifecycle.
- The authors used a panel of IE truncation and deletion mutants for a range of protein-binding assays. This allowed them to map a TFIIB-binding domain in the IE protein’s sequence, located between amino acids 407 to 757.
Implications of the IE Protein and TFIIB Interaction
- IE mutants with internal deletions of amino acids 426 to 578 and 621 to 757 were partially defective for TFIIB binding. This suggests that the span between amino acids 407 to 757 could contain more than one TFIIB-binding domain.
- Using transient-cotransfection experiments, the researchers showed the physiological importance of the interaction between the IE protein and TFIIB.
- They noted that a partial deletion of the TFIIB-binding domain within the IE protein hampered its ability to activate the expression of the viral thymidine kinase gene (an example of an early viral gene promoter) by more than 20%. The similar deletion also reduced activation of the IR5 gene (an example of a late viral gene promoter) by over 50%.
- Conclusively, the research indicates the necessity of the IE protein’s interaction with TFIIB for its full transactivation function. The authors propose the IE-TFIIB interaction might form part of the mechanism through which the IE protein triggers transcription.
Cite This Article
APA
Jang HK, Albrecht RA, Buczynski KA, Kim SK, Derbigny WA, O'Callaghan DJ.
(2001).
Mapping the sequences that mediate interaction of the equine herpesvirus 1 immediate-early protein and human TFIIB.
J Virol, 75(21), 10219-10230.
https://doi.org/10.1128/JVI.75.21.10219-10230.2001 Publication
Researcher Affiliations
- Department of Microbiology and Immunology, Louisiana State University Health Sciences Center, Shreveport, Louisiana 71130-3932, USA.
MeSH Terms
- Animals
- Binding Sites
- Cells, Cultured
- DNA / metabolism
- Herpesvirus 1, Equid / chemistry
- Herpesvirus 1, Equid / genetics
- Humans
- Immediate-Early Proteins / chemistry
- Immediate-Early Proteins / metabolism
- Mice
- Precipitin Tests
- Promoter Regions, Genetic
- Transcription Factor TFIIB
- Transcription Factors / metabolism
- Transcriptional Activation
Grant Funding
- R01 AI022001 / NIAID NIH HHS
- AI-22001 / NIAID NIH HHS
References
This article includes 64 references
- Allen GP, Bryans JT. Molecular epizootiology, pathogenesis, and prophylaxis of equine herpesvirus-1 infections.. Prog Vet Microbiol Immunol 1986;2:78-144.
- Benson JD, Lawande R, Howley PM. Conserved interaction of the papillomavirus E2 transcriptional activator proteins with human and yeast TFIIB proteins.. J Virol 1997 Oct;71(10):8041-7.
- Bowles DE, Kim SK, O'Callaghan DJ. Characterization of the trans-activation properties of equine herpesvirus 1 EICP0 protein.. J Virol 2000 Feb;74(3):1200-8.
- Buratowski S. The basics of basal transcription by RNA polymerase II.. Cell 1994 Apr 8;77(1):1-3.
- Buczynski KA, Kim SK, O'Callaghan DJ. Characterization of the transactivation domain of the equine herpesvirus type 1 immediate-early protein.. Virus Res 1999 Dec 15;65(2):131-40.
- Carrozza MJ, DeLuca NA. Interaction of the viral activator protein ICP4 with TFIID through TAF250.. Mol Cell Biol 1996 Jun;16(6):3085-93.
- Caughman GB, Robertson AT, Gray WL, Sullivan DC, O'Callaghan DJ. Characterization of equine herpesvirus type 1 immediate early proteins.. Virology 1988 Apr;163(2):563-71.
- Caughman GB, Staczek J, O'Callaghan DJ. Equine herpesvirus type 1 infected cell polypeptides: evidence for immediate early/early/late regulation of viral gene expression.. Virology 1985 Aug;145(1):49-61.
- Chi T, Lieberman P, Ellwood K, Carey M. A general mechanism for transcriptional synergy by eukaryotic activators.. Nature 1995 Sep 21;377(6546):254-7.
- Choy B, Green MR. Eukaryotic activators function during multiple steps of preinitiation complex assembly.. Nature 1993 Dec 9;366(6455):531-6.
- Clements JB, Watson RJ, Wilkie NM. Temporal regulation of herpes simplex virus type 1 transcription: location of transcripts on the viral genome.. Cell 1977 Sep;12(1):275-85.
- Crabb BS, Studdert MJ. Equine herpesviruses 4 (equine rhinopneumonitis virus) and 1 (equine abortion virus).. Adv Virus Res 1995;45:153-90.
- Derbigny WA, Kim SK, Caughman GB, O'Callaghan DJ. The EICP22 protein of equine herpesvirus 1 physically interacts with the immediate-early protein and with itself to form dimers and higher-order complexes.. J Virol 2000 Feb;74(3):1425-35.
- Elliott G, O'Hare P. Equine herpesvirus 1 gene 12, the functional homologue of herpes simplex virus VP16, transactivates via octamer sequences in the equine herpesvirus IE gene promoter.. Virology 1995 Oct 20;213(1):258-62.
- Garko-Buczynski KA, Smith RH, Kim SK, O'Callaghan DJ. Complementation of a replication-defective mutant of equine herpesvirus type 1 by a cell line expressing the immediate-early protein.. Virology 1998 Aug 15;248(1):83-94.
- Geisberg JV, Lee WS, Berk AJ, Ricciardi RP. The zinc finger region of the adenovirus E1A transactivating domain complexes with the TATA box binding protein.. Proc Natl Acad Sci U S A 1994 Mar 29;91(7):2488-92.
- Goodrich JA, Hoey T, Thut CJ, Admon A, Tjian R. Drosophila TAFII40 interacts with both a VP16 activation domain and the basal transcription factor TFIIB.. Cell 1993 Nov 5;75(3):519-30.
- Gray WL, Baumann RP, Robertson AT, Caughman GB, O'Callaghan DJ, Staczek J. Regulation of equine herpesvirus type 1 gene expression: characterization of immediate early, early, and late transcription.. Virology 1987 May;158(1):79-87.
- Gray WL, Baumann RP, Robertson AT, O'Callaghan DJ, Staczek J. Characterization and mapping of equine herpesvirus type 1 immediate early, early, and late transcripts.. Virus Res 1987 Sep;8(3):233-44.
- Grondin B, DeLuca N. Herpes simplex virus type 1 ICP4 promotes transcription preinitiation complex formation by enhancing the binding of TFIID to DNA.. J Virol 2000 Dec;74(24):11504-10.
- Grundy FJ, Baumann RP, O'Callaghan DJ. DNA sequence and comparative analyses of the equine herpesvirus type 1 immediate early gene.. Virology 1989 Sep;172(1):223-36.
- Guan KL, Dixon JE. Eukaryotic proteins expressed in Escherichia coli: an improved thrombin cleavage and purification procedure of fusion proteins with glutathione S-transferase.. Anal Biochem 1991 Feb 1;192(2):262-7.
- Ha I, Lane WS, Reinberg D. Cloning of a human gene encoding the general transcription initiation factor IIB.. Nature 1991 Aug 22;352(6337):689-95.
- Ha I, Roberts S, Maldonado E, Sun X, Kim LU, Green M, Reinberg D. Multiple functional domains of human transcription factor IIB: distinct interactions with two general transcription factors and RNA polymerase II.. Genes Dev 1993 Jun;7(6):1021-32.
- Hahn S. The role of TAFs in RNA polymerase II transcription.. Cell 1998 Nov 25;95(5):579-82.
- Hampsey M. Molecular genetics of the RNA polymerase II general transcriptional machinery.. Microbiol Mol Biol Rev 1998 Jun;62(2):465-503.
- Harty RN, Colle CF, Grundy FJ, O'Callaghan DJ. Mapping the termini and intron of the spliced immediate-early transcript of equine herpesvirus 1.. J Virol 1989 Dec;63(12):5101-10.
- Harty RN, Colle CF, O'Callaghan DJ. Equine herpesvirus type 1 gene regulation: characterization of transcription from the immediate-early gene region in productive infection.. Herpesvirus transcription and its regulation 1990;pp. 319–338.
- Harty RN, O'Callaghan DJ. An early gene maps within and is 3' coterminal with the immediate-early gene of equine herpesvirus 1.. J Virol 1991 Jul;65(7):3829-38.
- Haviv I, Shamay M, Doitsh G, Shaul Y. Hepatitis B virus pX targets TFIIB in transcription coactivation.. Mol Cell Biol 1998 Mar;18(3):1562-9.
- Holden VR, Caughman GB, Zhao Y, Harty RN, O'Callaghan DJ. Identification and characterization of the ICP22 protein of equine herpesvirus 1.. J Virol 1994 Jul;68(7):4329-40.
- Holden VR, Zhao Y, Thompson Y, Caughman GB, Smith RH, O'Callaghan DJ. Characterization of the regulatory function of the ICP22 protein of equine herpesvirus type 1.. Virology 1995 Jul 10;210(2):273-82.
- Honess RW, Roizman B. Regulation of herpesvirus macromolecular synthesis. I. Cascade regulation of the synthesis of three groups of viral proteins.. J Virol 1974 Jul;14(1):8-19.
- Johnston SD, Yu XM, Mertz JE. The major transcriptional transactivation domain of simian virus 40 large T antigen associates nonconcurrently with multiple components of the transcriptional preinitiation complex.. J Virol 1996 Feb;70(2):1191-202.
- Kim SK, Bowles DE, O'callaghan DJ. The gamma2 late glycoprotein K promoter of equine herpesvirus 1 is differentially regulated by the IE and EICP0 proteins.. Virology 1999 Apr 10;256(2):173-9.
- Kim SK, Buczynski KA, Caughman GB, O'Callaghan DJ. The equine herpesvirus 1 immediate-early protein interacts with EAP, a nucleolar-ribosomal protein.. Virology 2001 Jan 5;279(1):173-84.
- Kim SK, Holden VR, O'Callaghan DJ. The ICP22 protein of equine herpesvirus 1 cooperates with the IE protein to regulate viral gene expression.. J Virol 1997 Feb;71(2):1004-12.
- Kim SK, Smith RH, O'Callaghan DJ. Characterization of DNA binding properties of the immediate-early gene product of equine herpesvirus type 1.. Virology 1995 Oct 20;213(1):46-56.
- Kobayashi N, Boyer TG, Berk AJ. A class of activation domains interacts directly with TFIIA and stimulates TFIIA-TFIID-promoter complex assembly.. Mol Cell Biol 1995 Nov;15(11):6465-73.
- Kobayashi N, Horn PJ, Sullivan SM, Triezenberg SJ, Boyer TG, Berk AJ. DA-complex assembly activity required for VP16C transcriptional activation.. Mol Cell Biol 1998 Jul;18(7):4023-31.
- Lewis JB, Thompson YG, Feng X, Holden VR, O'Callaghan D, Caughman GB. Structural and antigenic identification of the ORF12 protein (alpha TIF) of equine herpesvirus 1.. Virology 1997 Apr 14;230(2):369-75.
- Lin YS, Green MR. Mechanism of action of an acidic transcriptional activator in vitro.. Cell 1991 Mar 8;64(5):971-81.
- Manet E, Allera C, Gruffat H, Mikaelian I, Rigolet A, Sergeant A. The acidic activation domain of the Epstein-Barr virus transcription factor R interacts in vitro with both TBP and TFIIB and is cell-specifically potentiated by a proline-rich region.. Gene Expr 1993;3(1):49-59.
- Matsumura T, Smith RH, O'Callaghan DJ. DNA sequence and transcriptional analyses of the region of the equine herpesvirus type 1 Kentucky A strain genome encoding glycoprotein C.. Virology 1993 Apr;193(2):910-23.
- O'Callaghan DJ, Osterrieder N. Equine herpesviruses. Encyclopedia of virology 1999;pp. 508–515.
- Paterson T, Everett RD. A prominent serine-rich region in Vmw175, the major transcriptional regulator protein of herpes simplex virus type 1, is not essential for virus growth in tissue culture.. J Gen Virol 1990 Aug;71 ( Pt 8):1775-83.
- Purewal AS, Allsopp R, Riggio M, Telford EA, Azam S, Davison AJ, Edington N. Equid herpesviruses 1 and 4 encode functional homologs of the herpes simplex virus type 1 virion transactivator protein, VP16.. Virology 1994 Jan;198(1):385-9.
- Ranish JA, Yudkovsky N, Hahn S. Intermediates in formation and activity of the RNA polymerase II preinitiation complex: holoenzyme recruitment and a postrecruitment role for the TATA box and TFIIB.. Genes Dev 1999 Jan 1;13(1):49-63.
- Rank NM, Lambert PF. Bovine papillomavirus type 1 E2 transcriptional regulators directly bind two cellular transcription factors, TFIID and TFIIB.. J Virol 1995 Oct;69(10):6323-34.
- Ransone LJ. Detection of protein-protein interactions by coimmunoprecipitation and dimerization.. Methods Enzymol 1995;254:491-7.
- Robertson AT, Caughman GB, Gray WL, Baumann RP, Staczek J, O'Callaghan DJ. Analysis of the in vitro translation products of the equine herpesvirus type 1 immediate early mRNA.. Virology 1988 Oct;166(2):451-62.
- Roizmann B, Desrosiers RC, Fleckenstein B, Lopez C, Minson AC, Studdert MJ. The family Herpesviridae: an update. The Herpesvirus Study Group of the International Committee on Taxonomy of Viruses.. Arch Virol 1992;123(3-4):425-49.
- Sambrook J, Fritsch EF, Maniatis T. Molecular cloning: a laboratory manual. 1989.
- Smith CA, Bates P, Rivera-Gonzalez R, Gu B, DeLuca NA. ICP4, the major transcriptional regulatory protein of herpes simplex virus type 1, forms a tripartite complex with TATA-binding protein and TFIIB.. J Virol 1993 Aug;67(8):4676-87.
- Smith RH, Caughman GB, O'Callaghan DJ. Characterization of the regulatory functions of the equine herpesvirus 1 immediate-early gene product.. J Virol 1992 Feb;66(2):936-45.
- Smith RH, Holden VR, O'Callaghan DJ. Nuclear localization and transcriptional activation activities of truncated versions of the immediate-early gene product of equine herpesvirus 1.. J Virol 1995 Jun;69(6):3857-62.
- Smith RH, Zhao Y, O'Callaghan DJ. The equine herpesvirus 1 (EHV-1) UL3 gene, an ICP27 homolog, is necessary for full activation of gene expression directed by an EHV-1 late promoter.. J Virol 1993 Feb;67(2):1105-9.
- Smith RH, Zhao Y, O'Callaghan DJ. The equine herpesvirus type 1 immediate-early gene product contains an acidic transcriptional activation domain.. Virology 1994 Aug 1;202(2):760-70.
- Triezenberg SJ. Structure and function of transcriptional activation domains.. Curr Opin Genet Dev 1995 Apr;5(2):190-6.
- Uesugi M, Nyanguile O, Lu H, Levine AJ, Verdine GL. Induced alpha helix in the VP16 activation domain upon binding to a human TAF.. Science 1997 Aug 29;277(5330):1310-3.
- Veschambre P, Roisin A, Jalinot P. Biochemical and functional interaction of the human immunodeficiency virus type 1 Tat transactivator with the general transcription factor TFIIB.. J Gen Virol 1997 Sep;78 ( Pt 9):2235-45.
- Yankulov K, Blau J, Purton T, Roberts S, Bentley DL. Transcriptional elongation by RNA polymerase II is stimulated by transactivators.. Cell 1994 Jun 3;77(5):749-59.
- Yao JM, Breiding DE, Androphy EJ. Functional interaction of the bovine papillomavirus E2 transactivation domain with TFIIB.. J Virol 1998 Feb;72(2):1013-9.
- Zhao Y, Holden VR, Smith RH, O'Callaghan DJ. Regulatory function of the equine herpesvirus 1 ICP27 gene product.. J Virol 1995 May;69(5):2786-93.
Citations
This article has been cited 13 times.- O'Brien MJ, Ansari A. Critical Involvement of TFIIB in Viral Pathogenesis.. Front Mol Biosci 2021;8:669044.
- Poelaert KCK, Van Cleemput J, Laval K, Descamps S, Favoreel HW, Nauwynck HJ. Beyond Gut Instinct: Metabolic Short-Chain Fatty Acids Moderate the Pathogenesis of Alphaherpesviruses.. Front Microbiol 2019;10:723.
- Poelaert KCK, Van Cleemput J, Laval K, Favoreel HW, Couck L, Van den Broeck W, Azab W, Nauwynck HJ. Equine Herpesvirus 1 Bridles T Lymphocytes To Reach Its Target Organs.. J Virol 2019 Apr 1;93(7).
- Kim SK, Shakya AK, O'Callaghan DJ. Full trans-activation mediated by the immediate-early protein of equine herpesvirus 1 requires a consensus TATA box, but not its cognate binding sequence.. Virus Res 2016 Jan 4;211:222-32.
- Kim S, Dai G, O'Callaghan DJ, Kim SK. Characterization of cis-acting elements required for autorepression of the equine herpesvirus 1 IE gene.. Virus Res 2012 Apr;165(1):52-60.
- Kim SK, Kim S, Dai G, Zhang Y, Ahn BC, O'Callaghan DJ. Identification of functional domains of the IR2 protein of equine herpesvirus 1 required for inhibition of viral gene expression and replication.. Virology 2011 Sep 1;417(2):430-42.
- Charvat RA, Breitenbach JE, Ahn B, Zhang Y, O'Callaghan DJ. The UL4 protein of equine herpesvirus 1 is not essential for replication or pathogenesis and inhibits gene expression controlled by viral and heterologous promoters.. Virology 2011 Apr 10;412(2):366-77.
- Breitenbach JE, Ebner PD, O'Callaghan DJ. The IR4 auxiliary regulatory protein expands the in vitro host range of equine herpesvirus 1 and is essential for pathogenesis in the murine model.. Virology 2009 Jan 20;383(2):188-94.
- Ahn BC, Breitenbach JE, Kim SK, O'Callaghan DJ. The equine herpesvirus-1 IR3 gene that lies antisense to the sole immediate-early (IE) gene is trans-activated by the IE protein, and is poorly expressed to a protein.. Virology 2007 Jun 20;363(1):15-25.
- Kim SK, Ahn BC, Albrecht RA, O'Callaghan DJ. The unique IR2 protein of equine herpesvirus 1 negatively regulates viral gene expression.. J Virol 2006 May;80(10):5041-9.
- Buczynski KA, Kim SK, O'Callaghan DJ. Initial characterization of 17 viruses harboring mutant forms of the immediate-early gene of equine herpesvirus 1.. Virus Genes 2005 Oct;31(2):229-39.
- Kim SK, Albrecht RA, O'Callaghan DJ. A negative regulatory element (base pairs -204 to -177) of the EICP0 promoter of equine herpesvirus 1 abolishes the EICP0 protein's trans-activation of its own promoter.. J Virol 2004 Nov;78(21):11696-706.
- Kim SK, Jang HK, Albrecht RA, Derbigny WA, Zhang Y, O'Callaghan DJ. Interaction of the equine herpesvirus 1 EICP0 protein with the immediate-early (IE) protein, TFIIB, and TBP may mediate the antagonism between the IE and EICP0 proteins.. J Virol 2003 Feb;77(4):2675-85.
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