Metabolomics reveals early predictors of blastocyst formation in equine ICSI-derived embryos.
Abstract: Equine in vitro embryo production (IVP) via ovum pick-up (OPU) and intracytoplasmic sperm injection (ICSI) has gained prominence in sport-horse breeding due to high success rates, efficient semen utilization, and year-round embryo production, including from mares with fertility challenges or postmortem. However, assessing viability of early-stage ICSI-produced equine embryos remains challenging due to subjective morphological evaluations and limited visibility of developmental features. Non-invasive metabolomic analysis of culture media offers a promising alternative to enhance embryo selection. This study compared metabolomic profiles of culture media from viable Day 4 ICSI-derived equine embryos progressing to the blastocyst stage with non-viable embryos arrested at the morula stage. Thereby, hypothesizing distinct metabolic signatures associated with developmental competence. Using liquid chromatography-tandem mass spectrometry (LC-MS/MS), amino acids, lipids, and other metabolites in individually cultured embryo media were analyzed. Results showed viable Day 4 embryos consumed significantly more dihydroxyphenylalanine (DOPA) than non-viable embryos. Increased secretion of amino acid derivatives (e.g., hippuric acid, glutamate, homoarginine), glycerolipids (e.g., diglyceride DG 18:0_20:0, triglyceride TG 17:0_36:4), phosphatidylcholines (PC O-34:3, PC O-36:3), cholesteryl ester (CE 22:2), ceramides (Hex2Cer d18:1/24:1, Hex2Cer d18:1/20:0, Cer d16:1/23:0), dehydroepiandrosterone sulfate (DHEAS), and glycodeoxycholic acid (GDCA) were observed in viable early embryos. These findings suggest metabolomic profiling can identify biomarkers of equine embryo viability as early as Day 4, potentially enabling early embryo selection, shorter culture period and improved vitrification and transfer outcomes. This study represents one of the first comprehensive metabolomic analyses of equine ICSI embryos, laying a foundation for developing non-invasive, biomarker-based assays to enhance assisted reproductive technologies (ART) efficiency.
Copyright © 2026 The Authors. Published by Elsevier Inc. All rights reserved.
Publication Date: 2026-02-20 PubMed ID: 41734440DOI: 10.1016/j.theriogenology.2026.117879Google Scholar: Lookup
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Summary
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Overview
- This research explores how metabolomic analysis of culture media can identify early metabolic markers that predict which equine embryos produced by ICSI will successfully develop into blastocysts.
- It aims to provide a non-invasive method for early embryo viability assessment to improve embryo selection and outcomes in horse breeding programs.
Background and Significance
- Equine in vitro embryo production (IVP) combining ovum pick-up (OPU) and intracytoplasmic sperm injection (ICSI) is increasingly used, especially in sport-horse breeding, because it allows year-round embryo production and use of valuable or fertility-challenged mares.
- Current methods to assess embryo viability rely heavily on morphological evaluation, which is subjective and limited, particularly at early developmental stages.
- Non-invasive metabolomic profiling of embryo culture media offers a promising alternative approach to accurately assess the metabolic activity and viability of embryos without harming them.
Study Objective
- The study aimed to compare the metabolomic profiles of culture media from Day 4 equine embryos produced by ICSI, distinguishing those that continue developing to blastocyst stage (viable) from those arrested at morula stage (non-viable).
- The researchers hypothesized that metabolic signatures measured in the culture medium could serve as early biomarkers of developmental competence.
Methods
- Equine embryos were individually cultured, and culture media samples were collected on Day 4 post-ICSI.
- Metabolites in the media were analyzed using liquid chromatography coupled with tandem mass spectrometry (LC-MS/MS) to identify and quantify amino acids, lipids, and other metabolites.
- The metabolic consumption or secretion patterns of viable versus non-viable embryos were compared statistically.
Key Findings
- Viable Day 4 embryos exhibited significantly higher consumption of dihydroxyphenylalanine (DOPA) compared to non-viable ones, indicating its potential role as an early predictor.
- Several metabolites were secreted in greater amounts by viable embryos, including:
- Amino acid derivatives such as hippuric acid, glutamate, and homoarginine.
- Glycerolipids like diglycerides (DG 18:0_20:0) and triglycerides (TG 17:0_36:4).
- Phosphatidylcholines (PC O-34:3, PC O-36:3).
- Cholesteryl ester (CE 22:2).
- Ceramides including Hex2Cer d18:1/24:1, Hex2Cer d18:1/20:0, and Cer d16:1/23:0.
- Dehydroepiandrosterone sulfate (DHEAS) and glycodeoxycholic acid (GDCA).
- The distinct metabolic profiles demonstrated a link between specific lipid and amino acid metabolism pathways and embryo developmental potential.
Implications
- The study suggests that metabolomic profiling of culture media can serve as a non-invasive, early biomarker-based assay to predict embryo viability as early as Day 4 of development.
- Early identification of viable embryos could:
- Enable earlier and more accurate embryo selection for transfer or cryopreservation (vitrification).
- Shorten culture periods, potentially improving the efficiency and outcomes of assisted reproductive technologies (ART) in horses.
- Reduce reliance on subjective morphological assessments.
- This is among the first comprehensive metabolomic studies on equine ICSI embryos, laying groundwork for applying metabolomics in equine ART protocols.
Conclusion
- The research identifies specific metabolic markers in the culture media of equine ICSI embryos that are associated with continued development to the blastocyst stage.
- These findings open pathways to develop reliable, non-invasive tests for embryo viability that could enhance success rates and streamline breeding programs in the equine industry.
Cite This Article
APA
Tsopp E, Kilk K, Gambini A, Tvrdà E, Viljaste-Seera A, Tuppits U, Jaakma Ü.
(2026).
Metabolomics reveals early predictors of blastocyst formation in equine ICSI-derived embryos.
Theriogenology, 257, 117879.
https://doi.org/10.1016/j.theriogenology.2026.117879 Publication
Researcher Affiliations
- Institute of Veterinary Medicine and Animal Sciences, Estonian University of Life Sciences, Tartu, Estonia. Electronic address: elina.tsopp@emu.ee.
- Department of Biochemistry, Institute of Biomedicine and Translational Medicine, University of Tartu, Estonia. Electronic address: kalle.kilk@ut.ee.
- School of Agriculture and Food Sustainability, Faculty of Science, The University of Queensland, Brisbane, Australia; School of Veterinary Sciences, Faculty of Science, The University of Queensland, Brisbane, Australia. Electronic address: a.gambini@uq.edu.au.
- Institute of Veterinary Medicine and Animal Sciences, Estonian University of Life Sciences, Tartu, Estonia. Electronic address: eva.tvrda@emu.ee.
- Institute of Veterinary Medicine and Animal Sciences, Estonian University of Life Sciences, Tartu, Estonia. Electronic address: anni.viljaste-seera@emu.ee.
- Institute of Veterinary Medicine and Animal Sciences, Estonian University of Life Sciences, Tartu, Estonia.
- Institute of Veterinary Medicine and Animal Sciences, Estonian University of Life Sciences, Tartu, Estonia. Electronic address: ylle.jaakma@emu.ee.
Conflict of Interest Statement
Declaration of interests I have nothing to declare. The authors have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper. The funders had no role in the design of the study; in the collection, analyses, or interpretation of data; in the writing of the manuscript; or in the decision to publish the results.
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