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Biophysical journal2000; 78(4); 2107-2115; doi: 10.1016/S0006-3495(00)76757-9

Proton electron nuclear double resonance from nitrosyl horse heart myoglobin: the role of His-E7 and Val-E11.

Abstract: Electron nuclear double resonance (ENDOR) spectroscopy has been used to study protons in nitrosyl horse heart myoglobin (MbNO). (1)H ENDOR spectra were recorded for different settings of the magnetic field. Detailed analysis of the ENDOR powder spectra, using computer simulation, based on the "orientation-selection" principle, leads to the identification of the available protons in the heme pocket. We observe hyperfine interactions of the N(HisF8)-Fe(2+)-N(NO) complex with five protons in axial and with eight protons in the rhombic symmetry along different orientations, including those of the principal axes of the g-tensor. Protons from His-E7 and Val-E11 residues are identified in the two symmetries, rhombic and axial, exhibited by MbNO. Our results indicate that both residues are present inside the heme pocket and help to stabilize one particular conformation.
Publication Date: 2000-03-29 PubMed ID: 10733988PubMed Central: PMC1300802DOI: 10.1016/S0006-3495(00)76757-9Google Scholar: Lookup
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  • Journal Article
  • Research Support
  • Non-U.S. Gov't

Summary

This research summary has been generated with artificial intelligence and may contain errors and omissions. Refer to the original study to confirm details provided. Submit correction.

The research uses a technique called electron nuclear double resonance to investigate the proteins found in horse heart myoglobin, particularly the proton interactions. The findings suggest that certain residues help to stabilize the structure of the protein.

Research Methodology

  • The study employed Electron Nuclear Double Resonance (ENDOR) spectroscopy, a technique often used to examine unobserved nuclear spins in the vicinity of a paramagnetic center. In this context, the technique was used to study protons in nitrosyl horse heart myoglobin (MbNO).
  • The researchers recorded (1)H ENDOR spectra for different settings of the magnetic field. This helps to measure the magnetic properties of the protons within the protein.
  • They also utilized computer simulations based on the “orientation-selection” principle, that enables them to clearly identify and analyze the available protons in the heme pocket, a cavity within the protein.

Findings and Conclusion

  • Through their detailed analysis of the ENDOR powder spectra, the team was able to identify hyperfine interactions of the N(HisF8)-Fe(2+)-N(NO) complex with numerous protons in both axial and rhombic symmetries along different orientations.
  • The researchers identified protons from two residues called His-E7 and Val-E11 in both the Rhombic and Axial symmetries. These residues are structural subunits of proteins.
  • The team concluded that these residues are present inside the heme pocket, which suggests that they play an important role in stabilizing a particularly significant protein formation.

Cite This Article

APA
Flores M, Wajnberg E, Bemski G. (2000). Proton electron nuclear double resonance from nitrosyl horse heart myoglobin: the role of His-E7 and Val-E11. Biophys J, 78(4), 2107-2115. https://doi.org/10.1016/S0006-3495(00)76757-9

Publication

ISSN: 0006-3495
NlmUniqueID: 0370626
Country: United States
Language: English
Volume: 78
Issue: 4
Pages: 2107-2115

Researcher Affiliations

Flores, M
  • Centro Brasileiro de Pesquisas Físicas, 22290-180 Rio de Janeiro, Brazil.
Wajnberg, E
    Bemski, G

      MeSH Terms

      • Animals
      • Biophysical Phenomena
      • Biophysics
      • Electron Spin Resonance Spectroscopy / methods
      • Heme / chemistry
      • Histidine / chemistry
      • Horses
      • Models, Molecular
      • Myocardium / chemistry
      • Myoglobin / chemistry
      • Protein Conformation
      • Protons
      • Valine / chemistry

      References

      This article includes 21 references
      1. Lim M, Jackson TA, Anfinrud PA. Binding of CO to myoglobin from a heme pocket docking site to form nearly linear Fe-C-O.. Science 1995 Aug 18;269(5226):962-6.
        pubmed: 7638619doi: 10.1126/science.7638619google scholar: lookup
      2. Jewsbury P, Kitagawa T. The distal residue-CO interaction in carbonmonoxy myoglobins: a molecular dynamics study of two distal histidine tautomers.. Biophys J 1994 Dec;67(6):2236-50.
        pubmed: 7696465doi: 10.1016/S0006-3495(94)80708-8google scholar: lookup
      3. Tierney DL, Huang H, Martasek P, Masters BS, Silverman RB, Hoffman BM. ENDOR spectroscopic evidence for the position and structure of NG-hydroxy-L-arginine bound to holo-neuronal nitric oxide synthase.. Biochemistry 1999 Mar 23;38(12):3704-10.
        pubmed: 10090758doi: 10.1021/bi982904rgoogle scholar: lookup
      4. Perutz MF. Stereochemistry of cooperative effects in haemoglobin.. Nature 1970 Nov 21;228(5273):726-39.
        pubmed: 5528785doi: 10.1038/228726a0google scholar: lookup
      5. Feher G, Isaacson RA, Scholes CP, Nagel R. Electron nuclear double resonance (ENDOR) investigation on myoglobin and hemoglobin.. Ann N Y Acad Sci 1973 Dec 31;222:86-101.
      6. Peng SM, Ibers JA. Stereochemistry of carbonylmetalloporphyrins. The structure of (pyridine)(carbonyl)(5, 10, 15, 20-tetraphenylprophinato)iron(II).. J Am Chem Soc 1976 Dec 8;98(25):8032-6.
        pubmed: 993515doi: 10.1021/ja00441a025google scholar: lookup
      7. Phillips SE. Structure and refinement of oxymyoglobin at 1.6 A resolution.. J Mol Biol 1980 Oct 5;142(4):531-54.
        pubmed: 7463482doi: 10.1016/0022-2836(80)90262-4google scholar: lookup
      8. Hori H, Ikeda-Saito M, Yonetani T. Single crystal EPR of myoglobin nitroxide. Freezing-induced reversible changes in the molecular orientation of the ligand.. J Biol Chem 1981 Aug 10;256(15):7849-55.
        pubmed: 6267028
      9. Phillips SE, Schoenborn BP. Neutron diffraction reveals oxygen-histidine hydrogen bond in oxymyoglobin.. Nature 1981 Jul 2;292(5818):81-2.
        pubmed: 7278969doi: 10.1038/292081a0google scholar: lookup
      10. Hanson JC, Schoenborn BP. Real space refinement of neutron diffraction data from sperm whale carbonmonoxymyoglobin.. J Mol Biol 1981 Nov 25;153(1):117-46.
        pubmed: 7338909doi: 10.1016/0022-2836(81)90530-1google scholar: lookup
      11. Shaanan B. Structure of human oxyhaemoglobin at 2.1 A resolution.. J Mol Biol 1983 Nov 25;171(1):31-59.
        pubmed: 6644819doi: 10.1016/s0022-2836(83)80313-1google scholar: lookup
      12. Olson JS, Mathews AJ, Rohlfs RJ, Springer BA, Egeberg KD, Sligar SG, Tame J, Renaud JP, Nagai K. The role of the distal histidine in myoglobin and haemoglobin.. Nature 1988 Nov 17;336(6196):265-6.
        pubmed: 3057383doi: 10.1038/336265a0google scholar: lookup
      13. Springer BA, Egeberg KD, Sligar SG, Rohlfs RJ, Mathews AJ, Olson JS. Discrimination between oxygen and carbon monoxide and inhibition of autooxidation by myoglobin. Site-directed mutagenesis of the distal histidine.. J Biol Chem 1989 Feb 25;264(6):3057-60.
        pubmed: 2644279
      14. Perutz MF. Myoglobin and haemoglobin: role of distal residues in reactions with haem ligands.. Trends Biochem Sci 1989 Feb;14(2):42-4.
        pubmed: 2650040doi: 10.1016/0968-0004(89)90039-xgoogle scholar: lookup
      15. Mathews AJ, Rohlfs RJ, Olson JS, Tame J, Renaud JP, Nagai K. The effects of E7 and E11 mutations on the kinetics of ligand binding to R state human hemoglobin.. J Biol Chem 1989 Oct 5;264(28):16573-83.
        pubmed: 2777799
      16. Rohlfs RJ, Mathews AJ, Carver TE, Olson JS, Springer BA, Egeberg KD, Sligar SG. The effects of amino acid substitution at position E7 (residue 64) on the kinetics of ligand binding to sperm whale myoglobin.. J Biol Chem 1990 Feb 25;265(6):3168-76.
        pubmed: 2303446
      17. Hong MK, Braunstein D, Cowen BR, Frauenfelder H, Iben IE, Mourant JR, Ormos P, Scholl R, Schulte A, Steinbach PJ. Conformational substates and motions in myoglobin. External influences on structure and dynamics.. Biophys J 1990 Aug;58(2):429-36.
        pubmed: 2207247doi: 10.1016/S0006-3495(90)82388-2google scholar: lookup
      18. Frauenfelder H, Sligar SG, Wolynes PG. The energy landscapes and motions of proteins.. Science 1991 Dec 13;254(5038):1598-603.
        pubmed: 1749933doi: 10.1126/science.1749933google scholar: lookup
      19. Li T, Quillin ML, Phillips GN Jr, Olson JS. Structural determinants of the stretching frequency of CO bound to myoglobin.. Biochemistry 1994 Feb 15;33(6):1433-46.
        pubmed: 8312263doi: 10.1021/bi00172a021google scholar: lookup
      20. Braunstein DP, Chu K, Egeberg KD, Frauenfelder H, Mourant JR, Nienhaus GU, Ormos P, Sligar SG, Springer BA, Young RD. Ligand binding to heme proteins: III. FTIR studies of His-E7 and Val-E11 mutants of carbonmonoxymyoglobin.. Biophys J 1993 Dec;65(6):2447-54.
        pubmed: 8312483doi: 10.1016/S0006-3495(93)81310-9google scholar: lookup
      21. Flores M, Wajnberg E, Bemski G. Temperature dependence of Q-band electron paramagnetic resonance spectra of nitrosyl heme proteins.. Biophys J 1997 Dec;73(6):3225-9.
        pubmed: 9414233doi: 10.1016/S0006-3495(97)78347-4google scholar: lookup

      Citations

      This article has been cited 1 times.
      1. Merchant KA, Noid WG, Akiyama R, Finkelstein IJ, Goun A, McClain BL, Loring RF, Fayer MD. Myoglobin-CO substate structures and dynamics: multidimensional vibrational echoes and molecular dynamics simulations.. J Am Chem Soc 2003 Nov 12;125(45):13804-18.
        doi: 10.1021/ja035654xpubmed: 14599220google scholar: lookup