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Research in veterinary science2008; 86(2); 353-358; doi: 10.1016/j.rvsc.2008.07.015

Rapid and sensitive detection of African horse sickness virus by real-time PCR.

Abstract: A highly sensitive and specific TaqMan-MGB real-time RT-PCR assay has been developed and standardised for the detection of African horse sickness virus (AHSV). Primers and MGB probe specific for AHSV were selected within a highly conserved region of genome segment 7. The robustness and general application of the diagnostic method were verified by the detection of 12 AHSV isolates from all of the nine serotypes. The analytical sensitivity ranged from 0.001 to 0.15 TCID(50) per reaction, depending on the viral serotype. Real-time PCR performance was preliminarily assessed by analysing a panel of field equine samples. The same primer pair was used to standardise a conventional RT-PCR as an affordable, useful and simple alternative method in laboratories without access to real-time PCR instruments. The two techniques present novel tools to improve the molecular diagnosis of African horse sickness (AHS).
Publication Date: 2008-09-07 PubMed ID: 18782637DOI: 10.1016/j.rvsc.2008.07.015Google Scholar: Lookup
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  • Journal Article
  • Research Support
  • Non-U.S. Gov't

Summary

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The researchers developed a highly sensitive and specific test to detect African horse sickness virus in horses using real-time RT-PCR assay. They validated the test across multiple strains of the virus and assessed its performance on field samples from horses. Additionally, they created a simpler alternative method for labs without access to advanced testing equipment.

Development of a Novel Testing Method for AHSV

  • The research team developed a novel testing method using a TaqMan-MGB real-time RT-PCR assay. This method is capable of detecting the African horse sickness virus (AHSV), a highly lethal virus affecting equines.
  • They selected primers and an MGB probe specific for AHSV within a highly conserved region of genome segment 7. This region was chosen for its reliability and specificity in identifying AHSV.

Validation and Sensitivity Analysis

  • The effectiveness of this method was established by successfully detecting 12 AHSV isolates from all the nine serotypes, thus indicating its broad applicability.
  • The sensitivity of the test varied based on the viral serotype and ranged from 0.001 to 0.15 TCID(50) per reaction.

Real-world Application and Performance Assessment

  • The effectiveness of the real-time PCR analysis method was preliminarily assessed using field samples collected from horses. However, the abstract does provide detailed results from this assessment.

Alternative Method for Labs Lacking Real-time PCR Instruments

  • Understanding the limitations of some laboratories that may not have access to real-time PCR instruments, the team used the same primer pair to develop a simpler conventional RT-PCR method as an alternative.
  • This alternative provides an affordable and straightforward way for these labs to improve their ability to diagnose African horse sickness.

Conclusion and Significance

  • This research not only offers a new, more sensitive method to detect AHSV but also presents an alternative approach for labs with limited resources. These tools can contribute significantly to the improvement of African horse sickness diagnosis.

Cite This Article

APA
Fernández-Pinero J, Fernández-Pacheco P, Rodríguez B, Sotelo E, Robles A, Arias M, Sánchez-Vizcaíno JM. (2008). Rapid and sensitive detection of African horse sickness virus by real-time PCR. Res Vet Sci, 86(2), 353-358. https://doi.org/10.1016/j.rvsc.2008.07.015

Publication

ISSN: 0034-5288
NlmUniqueID: 0401300
Country: England
Language: English
Volume: 86
Issue: 2
Pages: 353-358

Researcher Affiliations

Fernández-Pinero, J
  • Centro de Investigación en Sanidad Animal (CISA-INIA), Valdeolmos, 28130 Madrid, Spain. fpinero@inia.es
Fernández-Pacheco, P
    Rodríguez, B
      Sotelo, E
        Robles, A
          Arias, M
            Sánchez-Vizcaíno, J M

              MeSH Terms

              • African Horse Sickness / genetics
              • African Horse Sickness / virology
              • African Horse Sickness Virus / genetics
              • African Horse Sickness Virus / isolation & purification
              • Animals
              • Horses
              • RNA, Viral / chemistry
              • RNA, Viral / genetics
              • Reverse Transcriptase Polymerase Chain Reaction / methods
              • Reverse Transcriptase Polymerase Chain Reaction / veterinary
              • Sensitivity and Specificity
              • Spain