Recent sequencing and phylogenetic analysis of equine herpesviruses 1 and 4 among different equine populations in Egypt.
Abstract: Equine herpes viruses (EHVs) are considered one of the most important respiratory pathogens in equids, resulting in serious outcomes for equine health worldwide. The objectives of the current research were the detection, molecular characterization, and isolation of EHV-1 and EHV-4 circulating within different equine populations in Egypt, either clinically or in apparently healthy horses. Unassigned: A total of 120 field samples were collected, and DNA was extracted. Screening and typing of extracted DNA were done by consensus and conventional PCR assays for detection of EHV-1 and EHV-4, followed by sequencing and phylogenetic analysis to confirm the virus identity. Selected positive samples for both EHV-1 and EHV-4 were subjected to Madin-Darby bovine kidney (MDBK) cell lines for virus isolation. Unassigned: The obtained results revealed that 58/120 (48%) samples were positive for EHVs. Typing of positive samples showed that EHV-1 was detected in (48/120) 40% of samples and EHV-4 was detected in (15/120) 12% of samples, while dual infection by both EHV-1 and 4 was detected in five samples. Unassigned: The current study revealed new data on the continuous circulation of EHV-1 and EHV-4 within equine populations in Egypt, and individual horses could be infected by multiple EHVs. In addition, latently infected horses are acting as potential reservoirs for frequent virus reactivation.
Copyright: © Journal of Advanced Veterinary and Animal Research.
Publication Date: 2023-12-31 PubMed ID: 38370903PubMed Central: PMC10868697DOI: 10.5455/javar.2023.j719Google Scholar: Lookup The Equine Research Bank provides access to a large database of publicly available scientific literature. Inclusion in the Research Bank does not imply endorsement of study methods or findings by Mad Barn.
- Journal Article
Summary
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This research is about studying the presence and characteristics of Equine herpesviruses (EHVs) among different horse populations in Egypt. The focus was on the detection, molecular characterization, isolation and analysis of EHV-1 and EHV-4, significant respiratory pathogens harmful to equine health.
Methodology and Data Collection
- 120 field samples were collected from clinically ill and apparently healthy horses.
- DNA was extracted from these samples for screening and typing, using consensus and conventional Polymerase Chain Reaction (PCR) assays to detect EHV-1 and EHV-4.
- Further confirmation of the virus identity was done through sequencing and phylogenetic analysis.
- Selected positive samples were subjected to Madin-Darby bovine kidney (MDBK) cell lines for virus isolation.
Results and Findings
- Out of 120 samples, 58 (48%) were found positive for EHVs.
- EHV-1 was detected in 40% of the samples, and EHV-4 was detected in 12%.
- Five samples were found to have dual infection – both EHV-1 and EHV-4.
- The results implied the regular presence of EHV-1 and EHV-4 among equine populations in Egypt.
- The study also identified that individual horses could be affected by multiple EHVs.
- Moreover, latently infected horses were identified that could act as potential reservoirs for regular virus reactivation.
Implications of the Study
The study offers new data about the ongoing circulation of EHV-1 and EHV-4 within horse populations in Egypt. Such research can aid preventative measures and treatments for this significant equine health issue. It also highlights the possibility of individual horses being infected with multiple forms of the virus and acting as reservoirs for its reactivation, emphasizing the need for effective control mechanisms.
Cite This Article
APA
El-Zayat M, Shemies OA, Mosad SM, El Rahman SA.
(2023).
Recent sequencing and phylogenetic analysis of equine herpesviruses 1 and 4 among different equine populations in Egypt.
J Adv Vet Anim Res, 10(4), 639-646.
https://doi.org/10.5455/javar.2023.j719 Publication
Researcher Affiliations
- Virology Research Department (VRD), Agricultural Research Center (ARC), Animal Health Research Institute (AHRI), Giza, Egypt.
- Virology Research Department (VRD), Agricultural Research Center (ARC), Animal Health Research Institute (AHRI), Giza, Egypt.
- Department of Virology, Faculty of Veterinary Medicine, Mansoura University, Mansoura, Egypt.
- Department of Virology, Faculty of Veterinary Medicine, Mansoura University, Mansoura, Egypt.
Conflict of Interest Statement
The authors manifested that they have no conflicts of interest.
References
This article includes 36 references
- Giannetto C, Giudice E, Piccione G, Castronovo C, Arfuso F. Immune and inflammatory response in horse vaccinated against equine herpesviruses 1 (EHV-1) and 4 (EHV-4) assessed by serum protein electrophoretic pattern and leukocyte population. J Equine Vet Sci. 2022;116:104051. https://doi.org/10.1016/j.jevs.2022.104051.
- Oladunni FS, Horohov DW, Chambers TM. EHV-1: a constant threat to the horse industry. Front Microbiol. 2019;10:2668. https://doi.org/10.3389/fmicb.2019.02668.
- OIE. Equine rhinopneumonitis (infection with equid herpesvirus-1 and -4).In: manual of diagnositc tests and vaccines for terrestial animals. OIE World Organization for Animal Health 2019
- Laval K, Poelaert KC, Van Cleemput J, Zhao J, Vandekerckhove AP, Gryspeerdt AC, et al. The pathogenesis and immune evasive mechanisms of equine herpesvirus type 1. Front Microbiol. 2021;12:662686. https://doi.org/10.3389/fmicb.2021.662686.
- Zarski LM, Giessler KS, Jacob SI, Weber PS, McCauley AG, Lee Y, et al. Identification of host factors associated with the development of equine herpesvirus myeloencephalopathy by transcriptomic analysis of peripheral blood mononuclear cells from horses. Viruses. 2021;13(3):356. https://doi.org/10.3390/v13030356.
- Carvalho R, Passos LM, Martins AS. Development of a differential multiplex PCR assay for equine herpesvirus 1 and 4 as a diagnostic tool. J Vet Med. 2000;47(5):351u20139. https://doi.org/10.1046/j.1439-0450.2000.00361.x.
- Davison AJ, Eberle R, Ehlers B, Hayward GS, McGeoch DJ, Minson AC, et al. The order herpesvirales. Arch Virol. 2009;154:171u20137. https://doi.org/10.1007/s00705-008-0278-4.
- Bryant NA, Wilkie GS, Russell CA, Compston L, Grafham D, Clissold L, et al. Genetic diversity of equine herpesvirus 1 isolated from neurological, abortigenic and respiratory disease outbreaks. Transb Emerg Dis. 2018;65:817u201332. https://doi.org/10.1111/tbed.12809.
- Schoch CL, Ciufo S, Domrachev M, Hotton CL, Kannan S, Khovanskaya R, et al. NCBI taxonomy: a comprehensive update on curation, resources and tools. Database 2020. 2020:baaa062. https://doi.org/10.1093/database/baaa062.
- El-Hage C, Mekuria Z, Dynon K, Hartley C, McBride K, Gilkerson J. Association of equine herpesvirus 5 with mild respiratory disease in a Survey of EHV1,-2,-4 and-5 in 407 Australian Horses. Animals. 2021;11(12):3418. https://doi.org/10.3390/ani11123418.
- Saklou N, Pleasant S, Lahmers K, Funk R. Prevalence of latent equid herpesvirus type 1 in submandibular lymph nodes of horses in Virginia. Pathogens. 2023;12(6):813. ttps://doi.org/10.3390/pathogens12060813.
- Allen GP, Breathnach CC. Quantification by real-time PCR of the magnitude and duration of leucocyte-associated viraemia in horses infected with neuropathogenic vs. non-neuropathogenic strains of EHV-1. Equine Vet J. 2006;38(3):252u20137. https://doi.org/10.2746/042516406776866453.
- Hussey SB, Clark R, Lunn KF, Breathnach C, Soboll G, Whalley JM, et al. Detection and quantification of equine herpesvirus-1 viremia and nasal shedding by real-time polymerase chain reaction. J Vet Diag Invest. 2006;18(4):335u201342. https://doi.org/10.1177/104063870601800403.
- Nicola P, Hussey SB, Mapes S, Leutenegger CM, Madigan JE, Ferraro GL, et al. Comparison of four methods to quantify equid herpesvirus 1 load by real-time polymerase chain reaction in nasal secretions of experimentally and naturally infected horses. J Vet Diagn Invest. 2009;21(6):836u201340. https://doi.org/10.1177/104063870902100611.
- Abd El-Hafeiz YG, Abu Maaty A, Darwish S. Isolation of equine herpesvirus-1 (EHV-1) as a cause of reproductive disorders with emphasis on antigenic and genetic identifications. Int J Microbiol Res. 2010;1:26u201332.
- Amer HM, Shaltout AK, El-Sabagh IM, El-Sanousi AA, Shalaby MA. Prevalence of equine herpes viruses 1, 2 and 4 in Arabian horse population in Egypt. Afr J Microbiol Res. 2011;5(27):4805u201311. https://doi.org/10.5897/AJMR11.421.
- Abd El-Hamid MI, ElZeedy AS, El-Sanousi AA, Reda IM, Nehal SS, Abbas AM. Isolation of field isolate of equine herpes virus-1 based on molecular detection and characterization of glycoprotein D. Egypt J Virol. 2015;12:54u201364.
- Kalad SA, Hassan FM, Said F. Using indirect ELISA and PCR for the diagnosis of equine herpes virus-1 (EHV-1) infection in Egypt. J Vet Med Res. 2016;23(1):117u2013124. https://doi.org/10.21608/jvmr.2016.43230.
- Afify AF, Ahmed BM, Salem SA, El-Sanousi AA, Shalaby MA. First isolation and identification of EHV 4 during abortion outbreak among Arabian horses in Egypt reflects an alteration in pathogenic potentiality of EHV 4. J Virol Sci. 2017;2:92u2013101.
- Azab W, Bedair S, Abdelgawad A, Eschke K, Farag G, Abdel-Raheim A, et al. Detection of equid herpesviruses among different Arabian horse populations in Egypt. Vet Med Sci. 2019;5(3):361u201371. https://doi.org/10.1002/vms3.176.
- Ali AA, Refat NA, Algabri NA, Sobh MS. Fetal lesions of EHV-1 in equine. Acad Bras Cienc. 2020;92:1u201311. https://doi.org/10.1590/0001-3765202020180837.
- Mohammed S, Bazid A, Shahein M, Abo-Elkhair M. Isolation and identification of some viruses causing abortion in equine in Egypt. J Curr Vet Res. 2022;4(2):68u201379. https://doi.org/10.21608/jcvr.2022.267515.
- VanDevanter DR, Warrener P, Bennett L, Schultz ER, Coulter S, Garber RL, et al. Detection and analysis of diverse herpesviral species by consensus primer PCR. J Clin Microbiol. 1996;34(7):1666. https://doi.org/10.1128/jcm.34.7.1666-1671.1996.
- Taktaz Hafshejani T, Nekoei S, Vazirian B, Doosti A, Khamesipour F, Anyanwu MU. Molecular detection of equine herpesvirus types 1 and 4 infection in healthy horses in Isfahan central and Shahrekord southwest regions, Iran. BioMed Res Int. 2015;2015 https://doi.org/10.1155/2015/917854.
- Garvey M, Lyons R, Hector RD, Walsh C, Arkins S, Cullinane A. Molecular characterisation of equine herpesvirus 1 isolates from cases of abortion, respiratory and neurological disease in Ireland between 1990 and 2017. Pathogens. 2019;8(1):7. https://doi.org/10.3390/pathogens8010007.
- Reed SM, Toribio RE. Equine herpesvirus 1 and 4. Vet Clin North Am Equine Pract. 2004;20(3):631u201342. https://doi.org/10.1016/j.cveq.2004.09.001.
- Allen G. International Veterinary Information Service (IVIS) Ithaca, NY: 2002. Respiratory infections by equine herpesvirus types1 and 4.
- Ma G, Azab W, Osterrieder N. Equine herpesviruses type 1 (EHV-1) and 4 (EHV-4)u2014masters of co-evolution and a constant threat to equids and beyond. Vet Microbiol. 2013 167(1u20132):123u201334. https://doi.org/10.1016/j.vetmic.2013.06.018.
- Al-Shammari Z, Ahmed B, Haroun M, Afify A, Elsanousi AA, Shalaby M. A first molecular phylogeny of an Egyptian equine herpesvirus-4 strain derived from a fetal Arabian horse. J Vet Sci Med Diag. 2016;5(1):2u20134. https://doi.org/10.4172/2325-9590.1000186.
- Mohamed SI, Mohamed AS, Ayman HD, Sayed AS. Prevalence of equine herpes viruses 1 and 4 in Arabian horsesu2019 population. Egypt J Virol Sci. 2017;2:1u20139.
- Khattab OM, AbdelmegeedHK MM, HamdyME HN, Hamed A, Fahmy HA, Ibrahim E, et al. Equine herpes virus 4 (EHV4) investigation in aborted Egyptian Mares; molecular detection, isolation, and phylogeny for viral glycoprotein B. Adv Anim Vet Sci. 2022;10(9):1907u201315. https://doi.org/10.17582/journal.aavs/2022/10.9.1907.1915.
- Vargas-Bermudez D, Corredor FA, Ramu00edrez-Nieto G, Vera AV, Jaime CJ. Detection of equine herpesvirus 1 and 4 and its association with latency-associated transcripts in naturally infected horses in Colombia. J Re MVZ Cu00f3rdoba. 2018;23:6826u201337. https://doi.org/10.21897/rmvz.1371.
- Thiry E, Meurens F, Muylkens B, McVoy M, Gogev S, Thiry J, et al. Recombination in alphaherpesviruses. Rev Med Virol. 2005;15(2):89u2013103. https://doi.org/10.1002/rmv.451.
- Nicola P, Mapes S, David W. Comparison of the diagnostic sensitivity of nasopharyngeal and nasal swabs and use of viral loads for the molecular diagnosis of equine herpesvirus-1 infection. Med Infect Dis. 2007;53:220u201324.
- Nicola P, Hussey SB, Mapes S, Leutenegger CM, Madigan JE, Ferraro GL, et al. Comparison of four methods to quantify equid herpesvirus 1 load by real-time polymerase chain reaction in nasal secretions of experimentally and naturally infected horses. J Vet Diagn Invest. 2009;21(6):836u201340. https://doi.org/10.1177/104063870902100611.
- OIE. Equine rhinotracheitis. Manual of Standards Diagnostic Tests and Vaccines 4th edition. Part 2 Chapter 2.5.7. 2000