RNA Extraction from Equine Samples for Equine Influenza Virus.
Abstract: The primary goals of this chapter are to discuss common viral RNA isolation and purification methods that are routinely used by various diagnostic laboratories and to highlight the advantages and drawbacks of each method and to identify the most suitable and reliable method to increase the sensitivity and specificity of RT-PCR assays for the detection of equine influenza virus (EIV) in clinical specimens. Our experiences and review of literature show that magnetic bead-based nucleic extraction methods (manual and automatic) work well for isolation and purification of EIV RNA from nasal swab specimens. Furthermore, most of the information presented in this chapter could be directly applicable to isolation and purification of nucleic acids (both DNA and RNA) from other equine clinical samples.
Publication Date: 2020-03-15 PubMed ID: 32170703DOI: 10.1007/978-1-0716-0346-8_28Google Scholar: Lookup
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- Journal Article
- Research Support
- Non-U.S. Gov't
- Review
Summary
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This research paper focuses on the examination and evaluation of various viral RNA isolation and purification techniques in relation to the detection of equine influenza virus (EIV). The paper concludes that magnetic bead-based nucleic extraction methods perform well for the isolation and purification of EIV RNA from nasal swab samples.
Objective of the Research
- The study primarily aims to evaluate different viral RNA isolation and purification techniques used in diagnostic laboratories. The goal is to identify the most effective method in terms of increasing the sensitivity and specificity of RT-PCR assays for the detection of equine influenza virus (EIV). The choice of technique is studied in the context of its utility, potential advantages, and disadvantages.
Conclusions of the Research
- The paper concludes that magnetic bead-based nucleic extraction methods, both manual and automatic, are efficient for the isolation and purification of EIV RNA from nasal swab specimens. This statement is based on the experiences of the researchers and a comprehensive review of existing literature.
Applicability of the Research
- The author states that the findings can be directly applicable to the isolation and purification of both DNA and RNA from other equine clinical samples, indicating the broad potential applications of the research beyond EIV detection. This implies that the same methodology used for the successful isolation of EIV may be used in analyzing nucleic acids from different equine samples for other veterinary diagnostic procedures.
Cite This Article
APA
Balasuriya UBR.
(2020).
RNA Extraction from Equine Samples for Equine Influenza Virus.
Methods Mol Biol, 2123, 369-382.
https://doi.org/10.1007/978-1-0716-0346-8_28 Publication
Researcher Affiliations
- Louisiana Animal Disease Diagnostic Laboratory and Department of Pathobiological Sciences, School of Veterinary Medicine, Louisiana State University, Baton Rouge, LA, USA. balasuriya1@lsu.edu.
MeSH Terms
- Animals
- Horse Diseases / virology
- Horses / virology
- Influenza A virus / genetics
- Magnetic Phenomena
- Orthomyxoviridae Infections / veterinary
- Orthomyxoviridae Infections / virology
- RNA, Viral / isolation & purification
Citations
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