Sequence analysis of canine and equine ferritin H and L subunit cDNAs.
Abstract: Canine and equine ferritin H and L subunit cDNA clones were obtained using reverse transcriptase-polymerase chain reaction (RT-PCR) and TA cloning from various tissues. Canine liver and spleen ferritin H subunit cDNA clones contained an open reading frame for the same 182-amino acid protein as that reported in canine brain ferritin H subunit cDNA although there were substitutions in the 3'-noncoding regions. Ferritin L subunit cDNA clones from canine liver, spleen, and kidney showed identical coding sequences encoding the 174-amino acid protein except for a single nucleotide substitution in kidney (C474G). The H subunit nucleotide sequences of equine leukocyte and spleen were identical to the fragment encoding the 181-amino acid protein in equine peripheral blood mononuclear cells, with the exception of one substitution seen in both leukocyte and spleen sequences (C234T). The nucleotide sequence of equine leukocyte ferritin L subunit showed 7 substitutions compared with the published equine liver L subunit sequence with two substitutions at positions 281 and 282 resulting in an amino acid substitution of P94L. The amino acid residues involved in the ferroxidase center and in iron nucleation were perfectly conserved in H and L subunits of canine and equine ferritins, respectively.
Publication Date: 2005-07-26 PubMed ID: 16040348DOI: 10.1080/10425170400024359Google Scholar: Lookup
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- Comparative Study
- Journal Article
- Research Support
- Non-U.S. Gov't
Summary
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The research studied the coding sequences of ferritin H and L subunit cDNAs in dogs and horses, revealing variations in these sequences. These ferritin subunits have roles in iron metabolism, and the conservation of certain amino acid residues suggests their essential function in these species.
Methodology
- The researchers obtained canine and equine ferritin H and L subunit cDNA clones through a process called reverse transcriptase-polymerase chain reaction (RT-PCR) along with TA cloning from different tissue samples. RT-PCR and TA cloning are genomic research methods used to produce multiple copies of a specific DNA or RNA sequence enabling detailed study.
Results
- The cDNA clones for the ferritin H subunit from the liver and spleen of dogs were found to contain an open reading frame for the same 182-amino acid protein found in brain ferritin H subunit cDNA in dogs. However, there were changes in the 3′-noncoding regions, parts of the sequence that do not instruct the cell to build proteins.
- The ferritin L subunit cDNA clones from the dog’s liver, spleen, and kidney showed the same coding sequence for the 174-amino acid protein, but a single nucleotide substitution was observed in the kidney.
- The H subunit nucleotide sequences of horse leukocytes and spleen were the same as the fragment for the 181-amino acid protein in peripheral blood mononuclear cells. One substitution was seen in both leukocyte and spleen sequences.
- The ferritin L subunit from horse leukocytes exhibited seven substitutions compared to the published sequence from the liver. Two of these substitutions resulted in an amino acid change.
- The same amino acid residues involved in the ferroxidase center and iron nucleation were found in the H and L subunits of both dogs and horses, suggesting conservation of these critical roles in iron metabolism across species.
Implications
- The similarities and differences identified in these sequences can provide valuable insights about the roles and functions of the ferritin H and L subunits in different species. The information could further aid in understanding potential diseases related to iron metabolism in these animals.
Cite This Article
APA
Orino K, Miura T, Muto S, Watanabe K.
(2005).
Sequence analysis of canine and equine ferritin H and L subunit cDNAs.
DNA Seq, 16(1), 58-64.
https://doi.org/10.1080/10425170400024359 Publication
Researcher Affiliations
- Laboratory of Biochemistry, School of Veterinary Medicine and Animal Sciences, Kitasato University, Aomori, Japan. orino@vmas.kitasato-u.ac.jp
MeSH Terms
- Amino Acid Sequence
- Animals
- Base Sequence
- Cattle
- DNA, Complementary / genetics
- Dogs
- Ferritins / chemistry
- Ferritins / genetics
- Horses / genetics
- Molecular Sequence Data
- Protein Subunits
- Sequence Analysis, DNA
- Sequence Homology, Amino Acid
- Species Specificity
Citations
This article has been cited 4 times.- Sullivan KE, Mylniczenko ND, Nelson SE Jr, Coffin B, Lavin SR. Practical Management of Iron Overload Disorder (IOD) in Black Rhinoceros (BR; Diceros bicornis). Animals (Basel) 2020 Oct 29;10(11).
- Liu C, Liu D, Guo Y, Lu T, Li X, Zhang M, Ma J, Ma Y, Guan W. Construction of a full-length enriched cDNA library and preliminary analysis of expressed sequence tags from Bengal Tiger Panthera tigris tigris. Int J Mol Sci 2013 May 24;14(6):11072-83.
- He X, Zhang Y, Wu X, Xiao S, Yu Z. Cloning and characterization of two ferritin subunit genes from bay scallop, Argopecten irradians (Lamarck 1819). Mol Biol Rep 2011 Mar;38(3):2125-32.
- Takaesu A, Watanabe K, Takai S, Sasaki Y, Orino K. Sequence analysis of dolphin ferritin H and L subunits and possible iron-dependent translational control of dolphin ferritin gene. Acta Vet Scand 2008 Oct 27;50(1):42.
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