Streptococcus zooepidemicus and Streptococcus equi evolution: the role of CRISPRs.
Abstract: The host-restricted bacterium Streptococcus equi is the causative agent of equine strangles, the most frequently diagnosed infectious disease of horses worldwide. The disease is characterized by abscessation of the lymph nodes of the head and neck, leading to significant welfare and economic cost. S. equi is believed to have evolved from an ancestral strain of Streptococcus zooepidemicus, an opportunistic pathogen of horses and other animals. Comparison of the genome of S. equi strain 4047 with those of S. zooepidemicus identified examples of gene loss due to mutation and deletion, and gene gain through the acquisition of mobile genetic elements that have probably shaped the pathogenic specialization of S. equi. In particular, deletion of the CRISPR (clustered regularly interspaced short palindromic repeats) locus in the ancestor of S. equi may have predisposed the bacterium to acquire and incorporate new genetic material into its genome. These include four prophages and a novel integrative conjugative element. The virulence cargo carried by these mobile genetic elements is believed to have shaped the ability of S. equi to cause strangles. Further sequencing of S. zooepidemicus has highlighted the diversity of this opportunistic pathogen. Again, CRISPRs are postulated to influence evolution, balancing the need for gene gain over genome stability. Analysis of spacer sequences suggest that these pathogens may be susceptible to a limited range of phages and provide further evidence of cross-species exchange of genetic material among Streptococcus pyogenes, Streptococcus agalactiae and Streptococcus dysgalactiae.
Publication Date: 2013-11-22 PubMed ID: 24256234DOI: 10.1042/BST20130165Google Scholar: Lookup
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Summary
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This study explores the evolution of Streptococcus equi, a bacterium that causes a prevalent horse illness, from Streptococcus zooepidemicus, an opportunistic pathogen in animals. The researchers found that alterations in the bacterium’s genetic content, particularly the removal of a genetic feature known as CRISPR, has influenced its ability to become pathogenic.
Pathogenic Evolution of Streptococcus equi
- The study begins by discussing the bacterium Streptococcus equi, which is the perpetrator of equine strangles – a common horse infection that causes abscesses in the neck and head lymph nodes and has substantial welfare and economic implications.
- Scientists believe that S. equi evolved from Streptococcus zooepidemicus, a bacterium that opportunistically affects horses and other animals. This postulation initiated the research.
Genomic Comparison and Findings
- The researchers compared the genomes of S. equi and S. zooepidemicus. They discovered instances of gene loss and gain which they believe have shaped S. equi’s ability to be a specialized pathogen.
- Specifically, the deletion of the CRISPR locus, a portion of DNA known for its unique organization of palindromic repeated sections, in the ancestor of S. equi appears to have allowed the bacterium to get and incorporate new genetic material into its genome.
Role of Mobile Genetic Elements
- This new genetic material includes four prophages and a new kind of integrative conjugative element, both of which are mobile genetic elements. Mobile genetic elements are genes or sets of genes that can move around within a genome which contributes to genetic reshuffling and evolution.
- The study suggests that the collection of virulence-related genes carried by these mobile genetic elements may have played a role in shaping S. equi’s ability to cause equine strangles.
Diversity of S. zooepidemicus and Influence of CRISPRs
- Another finding from the sequencing of S. zooepidemicus is the substantial diversity of this opportunistic bacterium. The researchers have proposed CRISPRs as influential factors in its evolution.
- CRISPRs may balance the need for genome stability with the acquisition of new genes. The analysis of spacer sequences (variable sequences between each repeat in the DNA’s CRISPR region) implies these pathogens may be vulnerable to a limited variety of phages.
- This provides evidence of genetic material exchange between multiple species, including S. pyogenes, S. agalactiae, and S. dysgalactiae, which suggests a broader ecological influence.
Cite This Article
APA
Waller AS, Robinson C.
(2013).
Streptococcus zooepidemicus and Streptococcus equi evolution: the role of CRISPRs.
Biochem Soc Trans, 41(6), 1437-1443.
https://doi.org/10.1042/BST20130165 Publication
Researcher Affiliations
- *Centre for Preventive Medicine, Animal Health Trust, Lanwades Park, Kentford, Newmarket, Suffolk CB8 7UU, U.K.
MeSH Terms
- Clustered Regularly Interspaced Short Palindromic Repeats / genetics
- Clustered Regularly Interspaced Short Palindromic Repeats / immunology
- Immunity, Innate / genetics
- Streptococcus equi / genetics
- Streptococcus equi / immunology
Citations
This article has been cited 5 times.- Costa MO, Lage B. Streptococcus equi Subspecies zooepidemicus and Sudden Deaths in Swine, Canada.. Emerg Infect Dis 2020 Oct;26(10):2522-2524.
- Dominguez-Medina CC, Rash NL, Robillard S, Robinson C, Efstratiou A, Broughton K, Parkhill J, Holden MTG, Lopez-Alvarez MR, Paillot R, Waller AS. SpeS: A Novel Superantigen and Its Potential as a Vaccine Adjuvant against Strangles.. Int J Mol Sci 2020 Jun 23;21(12).
- Zeng H, Zhang J, Wu Q, He W, Wu H, Ye Y, Li C, Ling N, Chen M, Wang J, Cai S, Lei T, Ding Y, Xue L. Reconstituting the History of Cronobacter Evolution Driven by Differentiated CRISPR Activity.. Appl Environ Microbiol 2018 May 15;84(10).
- Björnsdóttir S, Harris SR, Svansson V, Gunnarsson E, Sigurðardóttir ÓG, Gammeljord K, Steward KF, Newton JR, Robinson C, Charbonneau ARL, Parkhill J, Holden MTG, Waller AS. Genomic Dissection of an Icelandic Epidemic of Respiratory Disease in Horses and Associated Zoonotic Cases.. mBio 2017 Aug 1;8(4).
- Harris SR, Robinson C, Steward KF, Webb KS, Paillot R, Parkhill J, Holden MT, Waller AS. Genome specialization and decay of the strangles pathogen, Streptococcus equi, is driven by persistent infection.. Genome Res 2015 Sep;25(9):1360-71.
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