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Biochemistry1995; 34(14); 4709-4713; doi: 10.1021/bi00014a027

Substitutions of isoleucine residues at the adenine binding site activate horse liver alcohol dehydrogenase.

Abstract: The contributions of isoleucine residues 224 and 269 of horse liver alcohol dehydrogenase to binding of the adenine moiety of NAD and to catalysis were studied by replacing Ile-224 with glycine (I224G) and Ile-269 with serine (I269S). The kinetic mechanisms of wild-type and both mutated liver enzymes were ordered. Affinities for several adenosine derivatives were decreased 5-50-fold by both substitutions. The I269S mutation differentially destabilized binding of the complete coenzyme, as affinities for NAD+ and NADH were decreased about 60-fold with the I224G enzyme and 350-fold for the I269S enzyme. The I269S substitution increased the rate constants for the conformational change that occurs when NAD+ binds. The maximum velocities for ethanol oxidation increased 7-fold with the I224G enzyme and 26-fold with the I269S enzyme due to the faster release of NADH. Hydride transfer limits the rate of oxidation of ethanol by the I269S enzyme. Inhibition constants for the substrate analogues, 2,2,2-trifluoroethanol and N-methylformamide, and catalytic efficiencies (V/Km) for ethanol and acetaldehyde were not changed by the mutations, indicating that binding of the adenosine moiety of the coenzyme is not necessarily coupled to the subsequent reaction of substrates.
Publication Date: 1995-04-11 PubMed ID: 7718576DOI: 10.1021/bi00014a027Google Scholar: Lookup
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  • Journal Article
  • Research Support
  • Non-U.S. Gov't
  • Research Support
  • U.S. Gov't
  • Non-P.H.S.

Summary

This research summary has been generated with artificial intelligence and may contain errors and omissions. Refer to the original study to confirm details provided. Submit correction.

The research explores how changes in certain amino acid residues in horse liver alcohol dehydrogenase can increase the enzyme’s ability to bind to an adenine compound and accelerate its catalyzing action. These findings could potentially enhance our understanding of enzyme function and might have applications in enzymatic therapies.

Objective of the Study

  • The researchers aimed to investigate the contribution of specific amino acids, isoleucine residues at positions 224 and 269, to the binding capacity and catalysis of the horse liver alcohol dehydrogenase enzyme.

Method used in the Study

  • Isoleucine residues at 224 and 269 were replaced with other amino acids – glycine (I224G) and serine (I269S). This is an approach used to mimic the effects of genetic mutations in the protein.

Key Findings of the Study

  • Both mutations resulted in reduced affinities for several adenosine derivatives, with affinity decreasing 5 to 50 times.
  • The change at position 269 (I269S) further destabilized the coenzyme binding, reducing affinities for NAD+ and NADH by 60-fold and 350-fold respectively.
  • This mutation also enhanced the rate of change in the enzyme’s conformation when NAD+ binds to it.
  • Furthermore, it allowed the enzyme to oxidize ethanol at a faster pace (up to 26 times with I269S mutation as compared to up to 7 times with I224G mutation).
  • This enhanced oxidation was credited to the faster release of NADH made possible by the I269S mutation.
  • However, the limiting factor in the rate of ethanol oxidation was the hydride transfer when I269S was present.
  • Despite these changes, the inhibition constants for 2,2,2-trifluoroethanol and N-methylformamide – two substrate analogues – and catalytic efficiencies for ethanol and acetaldehyde remained unchanged. This suggests that the adenosine binding to the coenzyme is not directly related to the subsequent reaction of substrates.

Implications of the Research

  • The study shows that altering specific amino acid residues can influence enzyme function dramatically. Such findings could be a foundation for further investigation into enzyme modification, potentially informing targeted therapies in medical and industrial fields where enzymes play a key role.

Cite This Article

APA
Fan F, Plapp BV. (1995). Substitutions of isoleucine residues at the adenine binding site activate horse liver alcohol dehydrogenase. Biochemistry, 34(14), 4709-4713. https://doi.org/10.1021/bi00014a027

Publication

ISSN: 0006-2960
NlmUniqueID: 0370623
Country: United States
Language: English
Volume: 34
Issue: 14
Pages: 4709-4713

Researcher Affiliations

Fan, F
  • Department of Biochemistry, University of Iowa, Iowa City 52242.
Plapp, B V

    MeSH Terms

    • Adenine / metabolism
    • Alcohol Dehydrogenase / chemistry
    • Alcohol Dehydrogenase / metabolism
    • Animals
    • Base Sequence
    • Binding Sites
    • Coenzymes / chemistry
    • Coenzymes / metabolism
    • Enzyme Activation
    • Enzyme Stability
    • Horses
    • Isoleucine / metabolism
    • Liver / enzymology
    • Molecular Sequence Data

    Citations

    This article has been cited 5 times.
    1. Pal S, Plapp BV. The Thr45Gly substitution in yeast alcohol dehydrogenase substantially decreases catalysis, alters pH dependencies, and disrupts the proton relay system. Chem Biol Interact 2021 Nov 1;349:109650.
      doi: 10.1016/j.cbi.2021.109650pubmed: 34529977google scholar: lookup
    2. Shanmuganatham KK, Wallace RS, Ting-I Lee A, Plapp BV. Contribution of buried distal amino acid residues in horse liver alcohol dehydrogenase to structure and catalysis. Protein Sci 2018 Mar;27(3):750-768.
      doi: 10.1002/pro.3370pubmed: 29271062google scholar: lookup
    3. Raj SB, Ramaswamy S, Plapp BV. Yeast alcohol dehydrogenase structure and catalysis. Biochemistry 2014 Sep 16;53(36):5791-803.
      doi: 10.1021/bi5006442pubmed: 25157460google scholar: lookup
    4. Yahashiri A, Rubach JK, Plapp BV. Effects of cavities at the nicotinamide binding site of liver alcohol dehydrogenase on structure, dynamics and catalysis. Biochemistry 2014 Feb 11;53(5):881-94.
      doi: 10.1021/bi401583fpubmed: 24437493google scholar: lookup
    5. Plapp BV. Conformational changes and catalysis by alcohol dehydrogenase. Arch Biochem Biophys 2010 Jan 1;493(1):3-12.
      doi: 10.1016/j.abb.2009.07.001pubmed: 19583966google scholar: lookup