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Microbiology and immunology2015; 59(6); 365-370; doi: 10.1111/1348-0421.12257

Use of loop-mediated isothermal amplification to detect six groups of pathogens causing secondary lower respiratory bacterial infections in horses.

Abstract: Microbial substitution occasionally occurs following the administration of antimicrobials to horses that have pneumonia or pleuropneumonia. Four specific loop-mediated isothermal amplification (LAMP) assays were developed to detect some equine respiratory pathogens, namely strains of the Bacteroides-Prevotella group, Klebsiella pneumoniae, Stenotrophomonas maltophilia, and Staphylococcus aureus. These four LAMP assays and two previously published LAMP assays targeting Escherichia coli or Pseudomonas aeruginosa were used on clinical respiratory specimens and a high accordance found between the results of the LAMP assays and bacterial culture. Use of these LAMP assays could enable rapid detection of pathogenic bacteria and swift administration of the appropriate antimicrobials.
Publication Date: 2015-04-08 PubMed ID: 25846404DOI: 10.1111/1348-0421.12257Google Scholar: Lookup
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  • Journal Article

Summary

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This research paper covers the development of rapid detection tests for bacteria associated with pneumonia in horses, in order to allow for faster, more accurate treatment interventions.

Objective of the Research

  • This scholarly study aims at investigating the use of loop-mediated isothermal amplification (LAMP) assays as a tool for the quick detection of bacteria that cause secondary lower respiratory infections in horses.

Methodology

  • The researchers developed four distinct LAMP assays, special tests used in molecular biology for amplifying DNA sequences, specifically for recognizing specific equine respiratory pathogens. These included strains of Bacteroides-Prevotella group, Klebsiella pneumoniae, Stenotrophomonas maltophilia, and Staphylococcus aureus.
  • Alongside these new tests, the team also applied previously established LAMP assays that were designed to identify Escherichia coli or Pseudomonas aeruginosa – two other bacteria known to affect horses’ respiratory systems.

Application and Results

  • These LAMP assays were used on clinical respiratory samples from horses. The results were then compared with regular bacterial culture results to gauge their accuracy and efficiency.
  • The researchers found a high level of agreement between the results of the LAMP tests and the standard bacterial culture methods used in veterinary laboratories, demonstrating the effectiveness of these assays as rapid diagnostic tools.

Implications and Benefits of the Study

  • The ability to rapidly identify specific bacteria types can be extremely beneficial in a clinical setting, as it would allow for more targeted treatment of infections.
  • These LAMP assays will enable prompt detection of harmful bacteria in horses with respiratory diseases, thus leading to immediate and suitable antibacterial treatment.
  • Furthermore, this quick identification could limit the misuse of antibiotics, hence reducing the risk of antibiotic resistance in these bacterial strains.

Cite This Article

APA
Kinoshita Y, Niwa H, Katayama Y. (2015). Use of loop-mediated isothermal amplification to detect six groups of pathogens causing secondary lower respiratory bacterial infections in horses. Microbiol Immunol, 59(6), 365-370. https://doi.org/10.1111/1348-0421.12257

Publication

ISSN: 1348-0421
NlmUniqueID: 7703966
Country: Australia
Language: English
Volume: 59
Issue: 6
Pages: 365-370

Researcher Affiliations

Kinoshita, Yuta
  • Microbiology Division, Epizootic Research Center, Equine Research Institute, Japan Racing Association, 1400-4 Shiba, Shimotuke, Tochigi, 329-0412, Japan.
Niwa, Hidekazu
  • Microbiology Division, Epizootic Research Center, Equine Research Institute, Japan Racing Association, 1400-4 Shiba, Shimotuke, Tochigi, 329-0412, Japan.
Katayama, Yoshinari
  • Microbiology Division, Epizootic Research Center, Equine Research Institute, Japan Racing Association, 1400-4 Shiba, Shimotuke, Tochigi, 329-0412, Japan.

MeSH Terms

  • Animals
  • Bacterial Infections / diagnosis
  • Bacterial Infections / microbiology
  • Bacterial Infections / veterinary
  • Bacteriological Techniques / methods
  • Coinfection / diagnosis
  • Coinfection / microbiology
  • Coinfection / veterinary
  • Horse Diseases / diagnosis
  • Horse Diseases / microbiology
  • Horses
  • Molecular Diagnostic Techniques / methods
  • Nucleic Acid Amplification Techniques / methods
  • Respiratory Tract Infections / diagnosis
  • Respiratory Tract Infections / microbiology
  • Respiratory Tract Infections / veterinary

Citations

This article has been cited 6 times.
  1. Venturini C, Bowring B, Partridge SR, Ben Zakour NL, Fajardo-Lubian A, Lopez Ayala A, Qin J, Totsika M, van Galen G, Norris J, Iredell J. Co-Occurrence of Multidrug Resistant Klebsiella pneumoniae Pathogenic Clones of Human Relevance in an Equine Pneumonia Case. Microbiol Spectr 2022 Jun 29;10(3):e0215821.
    doi: 10.1128/spectrum.02158-21pubmed: 35579468google scholar: lookup
  2. Uchida-Fujii E, Kinoshita Y, Niwa H, Maeda T, Nukada T, Ueno T. High prevalence of Mycoplasma equirhinis in Thoroughbred horses with respiratory symptoms in autumn 2018. J Vet Med Sci 2021 Dec 9;83(12):1907-1912.
    doi: 10.1292/jvms.21-0163pubmed: 34732605google scholar: lookup
  3. Li C, Fu G, Shi Y, Zhang AM, Xia X, Fang Y, Mao X, Jiang J, Song Y, Yang G. Rapid, specific, and sensitive detection of the ureR_1 gene in Klebsiella pneumoniae by loop-mediated isothermal amplification method. Braz J Med Biol Res 2019 Mar 25;52(3):e8186.
    doi: 10.1590/1414-431X20198186pubmed: 30916220google scholar: lookup
  4. Lloyd DH, Page SW. Antimicrobial Stewardship in Veterinary Medicine. Microbiol Spectr 2018 May;6(3).
  5. Mukherjee P, Roy P. Genomic Potential of Stenotrophomonas maltophilia in Bioremediation with an Assessment of Its Multifaceted Role in Our Environment. Front Microbiol 2016;7:967.
    doi: 10.3389/fmicb.2016.00967pubmed: 27446008google scholar: lookup
  6. Zhou D, Wang C, Li Z, Chen Y, Gao S, Guo J, Lu W, Su Y, Xu L, Que Y. Detection of Bar Transgenic Sugarcane with a Rapid and Visual Loop-Mediated Isothermal Amplification Assay. Front Plant Sci 2016;7:279.
    doi: 10.3389/fpls.2016.00279pubmed: 27014303google scholar: lookup