Validation of alternative models in genetic evaluation of racing performance in North Swedish and Norwegian cold-blooded trotters.
Abstract: There have been several approaches to the estimation of breeding values of performance in trotters, and the objective of this study was to validate different alternatives for genetic evaluation of racing performance in the North Swedish and Norwegian cold-blooded trotters. The current bivariate approach with the traits racing status (RACE) and earnings (EARN) was compared with a threshold-linear animal model and the univariate alternative with the performance trait only. The models were compared based on cross-validation of standardized earnings, using mean-squared errors of prediction (MSEP) and the correlation between the phenotype (Y) and the estimated breeding value (EBV). Despite possible effects of selection, a rather high estimate of heritability of EARN was found in our univariate analysis. The genetic trend estimate for EARN was clearly higher in the bivariate specification than in the univariate model, as a consequence of the considerable size of estimated heritability of RACE and its high correlation with EARN (approximately 0.8). RACE is highly influenced by ancestry rather than the on-farm performance of the horse itself. Consequently, the use of RACE in the genetic analysis may inflate the genetic trend of EARN because of a double counting of pedigree information. Although, because of the higher predictive ability of the bivariate specification, the improved ranking of animals within a year-class and the inability to discriminate between models for genetic trend, we propose to base prediction of breeding values on the current bivariate model.
© 2011 Blackwell Verlag GmbH.
Publication Date: 2011-06-27 PubMed ID: 22394238DOI: 10.1111/j.1439-0388.2011.00943.xGoogle Scholar: Lookup
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- Journal Article
- Research Support
- Non-U.S. Gov't
Summary
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This research evaluates different genetic models to predict racing performance in North Swedish and Norwegian cold-blooded trotters. The study compared the current bivariate model focusing on racing status and earnings with a univariate model and a threshold-linear animal model.
Methods and Approach
- The authors approached the validation of different ways of estimating the breeding values of performance in trotters, specifically North Swedish and Norwegian cold-blooded trotters.
- The current genetic evaluation method, which considers both the racing status (RACE) and earnings (EARN) of the horses, was compared with two alternatives: a threshold-linear animal model and a univariate model that only focuses on the performance trait.
Comparison Techniques
- The distinct methods were compared using a cross-validation process of standardized earnings. Mean Squared Errors of Prediction (MSEP) and the correlation between the phenotype (the observed characteristics) and the estimated breeding value (EBV) were utilized as the criteria for comparison.
Results and Findings
- Despite potential influences of selection, the study found a relatively high heritability estimate for EARN in the univariate analysis, meaning earnings were a strong predictor of genetic performance.
- When comparing the two models, the genetic trend estimate for earnings was higher in the bivariate model than in the univariate model. This was attributed to the considerable size of estimated heritability of RACE and its high correlation with EARN (approximately 0.8).
- The study pointed out that RACE tends to reflect ancestry rather than the horseracing performance of the horse itself. Because of this, using RACE in the genetic evaluation may overstate the genetic trend of EARN due to duplicated pedigree information.
Recommendations
- Despite the issue with potential inflation of genetic trends of EARN, the authors recommend sticking with the current bivariate model. The authors reason that the bivariate model has a higher predictive ability and improves the ranking of animals within a year-class. It also addresses the inability to differentiate between models for genetic trend.
Cite This Article
APA
Olsen HF, Klemetsdal G, Odegård J, Arnason T.
(2011).
Validation of alternative models in genetic evaluation of racing performance in North Swedish and Norwegian cold-blooded trotters.
J Anim Breed Genet, 129(2), 164-170.
https://doi.org/10.1111/j.1439-0388.2011.00943.x Publication
Researcher Affiliations
- Department of Animal and Aquacultural Sciences, Norwegian University of Life Sciences, Ås, Norway. hanne.fjerdingby@umb.no
MeSH Terms
- Animals
- Female
- Horses / genetics
- Linear Models
- Male
- Pedigree
- Physical Conditioning, Animal
- Sports
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