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Emerging infectious diseases2020; 26(6); 1182-1191; doi: 10.3201/eid2606.191179

Zoonotic Alphaviruses in Fatal and Neurologic Infections in Wildlife and Nonequine Domestic Animals, South Africa.

Abstract: Alphaviruses from Africa, such as Middelburg virus (MIDV), and Sindbis virus (SINV), were detected in horses with neurologic disease in South Africa, but their host ranges remain unknown. We investigated the contribution of alphaviruses to neurologic infections and death in wildlife and domestic animals in this country. During 2010-2018, a total of 608 clinical samples from wildlife and nonequine domestic animals that had febrile, neurologic signs or unexplained deaths were tested for alphaviruses. We identified 32 (5.5%) of 608 alphavirus infections (9 SINV and 23 MIDV), mostly in neurotissue of wildlife, domestic animals, and birds. Phylogenetic analysis of the RNA-dependent RNA polymerase gene confirmed either SINV or MIDV. This study implicates MIDV and SINV as potential causes of neurologic disease in wildlife and nonequine domestic species in Africa and suggests a wide host range and pathogenic potential.
Publication Date: 2020-05-23 PubMed ID: 32441633PubMed Central: PMC7258481DOI: 10.3201/eid2606.191179Google Scholar: Lookup
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  • Journal Article
  • Research Support
  • Non-U.S. Gov't
  • Research Support
  • U.S. Gov't
  • P.H.S.

Summary

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The research study investigates the impact of African Alphaviruses, such as the Middelburg virus (MIDV) and Sindbis virus (SINV), on the neurological health and mortality of wildlife and nonequine domestic animals in South Africa over the period 2010-2018.

Objective and Methodology

  • The main goal of the study was to determine the effects of alphaviruses on neurologic infections and death in wildlife and domestic animals (excluding horses) in South Africa.
  • Over the period of 2010 to 2018, clinical samples from 608 wild or domestic animals displaying symptoms such as fever and neurological signs, or with unexplained deaths, were tested for the presence of alphaviruses.

Results of the Study

  • Out of the total 608 samples tested, 32 (or 5.5%) were confirmed to be infected with alphaviruses, predominantly in the animals’ neurotissue. Among these, 9 samples tested positive for SINV and 23 tested positive for MIDV.
  • The infected animals included a broad range of species, including wildlife, domestic animals and birds, suggesting a wide host range for these alphaviruses.
  • The researchers confirmed the presence of either SINV or MIDV in the tested samples through phylogenetic analysis of the RNA-dependent RNA polymerase gene, a critical protein for the replication of alphaviruses.

Conclusions and Implications

  • This study identified both MIDV and SINV as potential causes of neurological diseases in wildlife and nonequine domestic species.
  • These findings suggest that these alphaviruses display a wide host range and pathogenic potential, posing potential threats to a broad range of animal species.
  • This research indicates a potential need for further investigation into the host range and impacts of alphaviruses on animal health, with potential implications for disease control strategies.

Cite This Article

APA
Steyn J, Fourie I, Steyl J, Williams J, Stivaktas V, Botha E, van Niekerk S, Reininghaus B, Venter M. (2020). Zoonotic Alphaviruses in Fatal and Neurologic Infections in Wildlife and Nonequine Domestic Animals, South Africa. Emerg Infect Dis, 26(6), 1182-1191. https://doi.org/10.3201/eid2606.191179

Publication

ISSN: 1080-6059
NlmUniqueID: 9508155
Country: United States
Language: English
Volume: 26
Issue: 6
Pages: 1182-1191

Researcher Affiliations

Steyn, Jumari
    Fourie, Isabel
      Steyl, Johan
        Williams, June
          Stivaktas, Voula
            Botha, Elizabeth
              van Niekerk, Stefanie
                Reininghaus, Bjorn
                  Venter, Marietjie

                    MeSH Terms

                    • Animals
                    • Animals, Domestic
                    • Animals, Wild
                    • Horses
                    • Phylogeny
                    • Sindbis Virus
                    • South Africa / epidemiology

                    Grant Funding

                    • U19 GH000571 / CGH CDC HHS

                    References

                    This article includes 31 references
                    1. Aguilar PV, Estrada-Franco JG, Navarro-Lopez R, Ferro C, Haddow AD, Weaver SC. Endemic Venezuelan equine encephalitis in the Americas: hidden under the dengue umbrella.. Future Virol 2011;6(6):721-740.
                      doi: 10.2217/fvl.11.50pmc: PMC3134406pubmed: 21765860google scholar: lookup
                    2. Lambert AJ, Martin DA, Lanciotti RS. Detection of North American eastern and western equine encephalitis viruses by nucleic acid amplification assays.. J Clin Microbiol 2003 Jan;41(1):379-85.
                    3. Zacks MA, Paessler S. Encephalitic alphaviruses.. Vet Microbiol 2010 Jan 27;140(3-4):281-6.
                    4. Powers AM, Brault AC, Tesh RB, Weaver SC. Re-emergence of Chikungunya and O'nyong-nyong viruses: evidence for distinct geographical lineages and distant evolutionary relationships.. J Gen Virol 2000 Feb;81(Pt 2):471-9.
                      doi: 10.1099/0022-1317-81-2-471pubmed: 10644846google scholar: lookup
                    5. Wahid B, Ali A, Rafique S, Idrees M. Global expansion of chikungunya virus: mapping the 64-year history.. Int J Infect Dis 2017 May;58:69-76.
                      doi: 10.1016/j.ijid.2017.03.006pubmed: 28288924google scholar: lookup
                    6. Forrester NL, Palacios G, Tesh RB, Savji N, Guzman H, Sherman M, Weaver SC, Lipkin WI. Genome-scale phylogeny of the alphavirus genus suggests a marine origin.. J Virol 2012 Mar;86(5):2729-38.
                      doi: 10.1128/JVI.05591-11pmc: PMC3302268pubmed: 22190718google scholar: lookup
                    7. Laine M, Luukkainen R, Toivanen A. Sindbis viruses and other alphaviruses as cause of human arthritic disease.. J Intern Med 2004 Dec;256(6):457-71.
                    8. McIntosh B, Jupp P, Dos Santos I, Meenehan G. Epidemics of West Nile and Sindbis viruses in South Africa and Culex (Culex) univittatus.. S Afr J Sci 1976;72:295–300.
                    9. Lwande OW, Obanda V, Bucht G, Mosomtai G, Otieno V, Ahlm C, Evander M. Global emergence of Alphaviruses that cause arthritis in humans.. Infect Ecol Epidemiol 2015;5:29853.
                      doi: 10.3402/iee.v5.29853pmc: PMC4685977pubmed: 26689654google scholar: lookup
                    10. Burt FJ, Goedhals D, Mathengtheng L. Arboviruses in southern Africa: are we missing something?. Future Virol 2014;9:993–1008.
                      doi: 10.2217/fvl.14.87google scholar: lookup
                    11. van Niekerk S, Human S, Williams J, van Wilpe E, Pretorius M, Swanepoel R, Venter M. Sindbis and Middelburg Old World Alphaviruses Associated with Neurologic Disease in Horses, South Africa.. Emerg Infect Dis 2015 Dec;21(12):2225-9.
                      doi: 10.3201/eid2112.150132pmc: PMC4672445pubmed: 26583836google scholar: lookup
                    12. KOKERNOT RH, SMITHBURN KC, WEINBREN MP. Neutralizing antibodies to arthropod-borne viruses in human beings and animals in the Union of South Africa.. J Immunol 1956 Nov;77(5):313-23.
                      pubmed: 13385500
                    13. KOKERNOT RH, DE MEILLON B, PATERSON HE, HEYMANN CS, SMITHBURN KC. Middelburg virus; a hitherto unknown agent isolated from Aedes mosquitoes during an epizootic in sheep in the eastern Cape Province.. S Afr J Med Sci 1957 Dec;22(4):145-53.
                      pubmed: 13529199
                    14. Attoui H, Sailleau C, Mohd Jaafar F, Belhouchet M, Biagini P, Cantaloube JF, de Micco P, Mertens P, Zientara S. Complete nucleotide sequence of Middelburg virus, isolated from the spleen of a horse with severe clinical disease in Zimbabwe.. J Gen Virol 2007 Nov;88(Pt 11):3078-3088.
                      doi: 10.1099/vir.0.83076-0pubmed: 17947533google scholar: lookup
                    15. SMITHBURN KC, KOKERNOT RH, HEYMANN CS, WEINBREN MP, ZENTKOWSKY D. Neutralizing antibodies for certain viruses in the sera of human beings residing in Northern Natal.. S Afr Med J 1959 Jul 4;33(27):555-61.
                      pubmed: 13675877
                    16. KOKERNOT RH, SMITHBURN KC, KLUGE E. Neutralizing antibodies against arthropod-borne viruses in the sera of domestic quadrupeds ranging in Tongland, Union of South Africa.. Ann Trop Med Parasitol 1961 Apr;55:73-85.
                    17. Hubálek Z, Rudolf I, Nowotny N. Arboviruses pathogenic for domestic and wild animals.. Adv Virus Res 2014;89:201-75.
                    18. Bancroft JD, Gamble M. Theory and practice of histological techniques. 2002.
                    19. Zaayman D, Human S, Venter M. A highly sensitive method for the detection and genotyping of West Nile virus by real-time PCR.. J Virol Methods 2009 May;157(2):155-60.
                    20. van Niekerk M, Freeman M, Paweska JT, Howell PG, Guthrie AJ, Potgieter AC, van Staden V, Huismans H. Variation in the NS3 gene and protein in South African isolates of bluetongue and equine encephalosis viruses.. J Gen Virol 2003 Mar;84(Pt 3):581-590.
                      doi: 10.1099/vir.0.18749-0pubmed: 12604809google scholar: lookup
                    21. Van Eeden C, Zaayman D, Venter M. A sensitive nested real-time RT-PCR for the detection of Shuni virus.. J Virol Methods 2014 Jan;195:100-5.
                    22. Stamatakis A. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies.. Bioinformatics 2014 May 1;30(9):1312-3.
                    23. Forrester NL, Palacios G, Tesh RB, Savji N, Guzman H, Sherman M, Weaver SC, Lipkin WI. Genome-scale phylogeny of the alphavirus genus suggests a marine origin.. J Virol 2012 Mar;86(5):2729-38.
                      doi: 10.1128/JVI.05591-11pmc: PMC3302268pubmed: 22190718google scholar: lookup
                    24. Powers AM, Brault AC, Shirako Y, Strauss EG, Kang W, Strauss JH, Weaver SC. Evolutionary relationships and systematics of the alphaviruses.. J Virol 2001 Nov;75(21):10118-31.
                    25. Weaver SC, Kang W, Shirako Y, Rumenapf T, Strauss EG, Strauss JH. Recombinational history and molecular evolution of western equine encephalomyelitis complex alphaviruses.. J Virol 1997 Jan;71(1):613-23.
                      doi: 10.1128/JVI.71.1.613-623.1997pmc: PMC191092pubmed: 8985391google scholar: lookup
                    26. McIntosh B. The epidemiology of arthropod-borne viruses in southern Africa. 1980.
                    27. Adams AP, Aronson JF, Tardif SD, Patterson JL, Brasky KM, Geiger R, de la Garza M, Carrion R Jr, Weaver SC. Common marmosets (Callithrix jacchus) as a nonhuman primate model to assess the virulence of eastern equine encephalitis virus strains.. J Virol 2008 Sep;82(18):9035-42.
                      doi: 10.1128/JVI.00674-08pmc: PMC2546911pubmed: 18614636google scholar: lookup
                    28. de Novaes Oliveira R, Iamamoto K, Silva ML, Achkar SM, Castilho JG, Ono ED, Lobo RS, Brandão PE, Carnieli P Jr, Carrieri ML, Kotait I, Macedo CI. Eastern equine encephalitis cases among horses in Brazil between 2005 and 2009.. Arch Virol 2014 Oct;159(10):2615-20.
                      doi: 10.1007/s00705-014-2121-4pubmed: 24862186google scholar: lookup
                    29. Bengis RG, Leighton FA, Fischer JR, Artois M, Mörner T, Tate CM. The role of wildlife in emerging and re-emerging zoonoses.. Rev Sci Tech 2004 Aug;23(2):497-511.
                      pubmed: 15702716
                    30. Lederberg J, Shope RE, Oaks SC Jr. Emerging infections: microbial threats to health in the United States. 1992.
                      pubmed: 25121245
                    31. Morse SS. Factors and determinants of disease emergence.. Rev Sci Tech 2004 Aug;23(2):443-51.
                      doi: 10.20506/rst.23.2.1494pubmed: 15702712google scholar: lookup

                    Citations

                    This article has been cited 9 times.
                    1. Wong ML, Zulzahrin Z, Vythilingam I, Lau YL, Sam IC, Fong MY, Lee WC. Perspectives of vector management in the control and elimination of vector-borne zoonoses. Front Microbiol 2023;14:1135977.
                      doi: 10.3389/fmicb.2023.1135977pubmed: 37025644google scholar: lookup
                    2. Jansen S, Lühken R, Helms M, Pluskota B, Pfitzner WP, Oerther S, Becker N, Schmidt-Chanasit J, Heitmann A. Vector Competence of Mosquitoes from Germany for Sindbis Virus. Viruses 2022 Nov 26;14(12).
                      doi: 10.3390/v14122644pubmed: 36560650google scholar: lookup
                    3. Fourie I, Snyman J, Williams J, Ismail A, Jansen van Vuren P, Venter M. Epidemiological and Genomic Characterisation of Middelburg and Sindbis Alphaviruses Identified in Horses with Febrile and Neurological Infections, South Africa (2014-2018). Viruses 2022 Sep 11;14(9).
                      doi: 10.3390/v14092013pubmed: 36146819google scholar: lookup
                    4. Snyman J, Venter GJ, Venter M. An Investigation of Culicoides (Diptera: Ceratopogonidae) as Potential Vectors of Medically and Veterinary Important Arboviruses in South Africa. Viruses 2021 Oct 1;13(10).
                      doi: 10.3390/v13101978pubmed: 34696407google scholar: lookup
                    5. Kacnik S, MacIntyre C, Guarido M, Venter M. Identification of insect-specific viruses in mosquitoes collected from wildlife and rural areas in north-eastern parts of South Africa using a metagenomic RNA sequencing approach. One Health Outlook 2025 Dec 6;7(1):62.
                      doi: 10.1186/s42522-025-00185-1pubmed: 41353382google scholar: lookup
                    6. Matthew DA, Karlsson E, Izang JA, Isberg L, Näslund J, Sjödin A, Ottosson U, Lwande OW, Waldenström J. First detection of Sindbis virus in wild birds in Nigeria. Sci Rep 2025 Jul 9;15(1):24621.
                      doi: 10.1038/s41598-025-10556-3pubmed: 40634439google scholar: lookup
                    7. Hu R, Li M, Chen S, Wang M, Tao X, Zhu Y, Yan H, Liu Y. Sniffer restricts arboviral brain infections by regulating ROS levels and protecting blood-brain barrier integrity in Drosophila and mosquitoes. PLoS Pathog 2024 Dec;20(12):e1012797.
                      doi: 10.1371/journal.ppat.1012797pubmed: 39680616google scholar: lookup
                    8. Graff SL, Eibner GJ, Ochieng JR, Jones TC, Nsubuga AM, Lutwama JJ, Rwego IB, Junglen S. Detection of two alphaviruses: Middelburg virus and Sindbis virus from enzootic amplification cycles in southwestern Uganda. Front Microbiol 2024;15:1394661.
                      doi: 10.3389/fmicb.2024.1394661pubmed: 38863760google scholar: lookup
                    9. Hungwe FTT, Laycock KM, Ntereke TD, Mabaka R, Paganotti GM. A historical perspective on arboviruses of public health interest in Southern Africa. Pathog Glob Health 2024 Mar;118(2):131-159.
                      doi: 10.1080/20477724.2023.2290375pubmed: 38082563google scholar: lookup