Squamous cell carcinoma (SCC) in horses is one of the most common forms of equine cancer. Originating in the squamous epithelial cells that form the outermost layer of the skin and line various internal surfaces, this condition can develop in a wide range of locations on the body.
Squamous cell carcinoma is particularly concerning because it can be aggressive, spreading to surrounding tissues and other areas of the horse’s body if left untreated.
While UV light exposure to unpigmented skin is a major risk factor, SCC is not limited to external locations. Factors such as chronic skin irritation, poor hygiene, viral infections, and genetic predisposition also play roles in its development.
Recognizing symptoms early, such as unusual growths or persistent sores, and seeking prompt veterinary care are essential for managing outcomes. With appropriate preventive measures, including UV protection and regular health monitoring, owners and caretakers can reduce the risk of SCC in their horses.
Squamous Cell Carcinoma in Horses
Squamous cell carcinoma (SCC) is a type of cancerous tumor that affects horses and originates in the squamous epithelial cells. These cells make up the outermost layer of many tissues, including: [1]
- Skin
- Respiratory tract
- Digestive tract
- Blood vessels
SCC is associated with UV exposure to areas of skin that are not pigmented, but also occurs in other parts of the horse’s body. [2] Left untreated, SCC can be fatal. [3] Horses suspected of having SCC require prompt veterinary attention.
Locations on the horse’s body that are susceptible to SCC include: [4][5][6][7][8][9][10]
- Skin
- Tissues in and around the eye
- Cornea
- Nasal passage or sinus
- Hard palate
- Pharynx/Larynx (throat)
- Perianal/Anal tissue
- Ear canal
- Hoof
- Tongue
- Guttural pouches
- Bladder and surrounding structures
- Head
- Genitals
- Tips of the ears
- Upper respiratory tract
- Lower urinary tract
- Upper digestive tract (mouth, esophagus, stomach)
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Squamous Cell Function & Cancer Pathogenesis
SCC develops from squamous epithelial cells. These scaly cells are flat and thin, forming a tight pattern of closely fitted polygons. Squamous epithelial cells make up the outermost layer of the horse’s skin and line various surfaces inside the body, especially areas where skin meets mucous membrane such as around the mouth, nostrils, eyes, and genitalia. [1]
The main function of squamous cells is protection. They prevent the body from losing too much moisture through evaporation and they provide a physical barrier between the tissue they line and outside forces. [1]
When a horse develops SCC, the cells mutate gradually from normal tissue into a tumor. As these mutations occur, the tumor goes through a series of developmental stages in a predictable pattern. [5] This allows veterinarians and laboratories to investigate how far the tumor has progressed (i.e. staging), which provides insight into potential outcomes and treatment options. [2]
Squamous cell carcinoma in horses is typically staged using a three-level system, with stages 1 through 3 indicating increasing tumor severity.
Table 1. SCC tumor grading [2][5]
| Tumor Grade | Definition | Description |
|---|---|---|
| Grade 1 | Well differentiated tumors |
|
| Grade 2 | Moderately differentiated tumors |
|
| Grade 3 | Poorly differentiated tumors |
|
Veterinarians use this grading system to guide treatment options for affected horses and predict possible outcomes. [2] The likelihood of metastasis (i.e. the cancer spreading) and poor outcomes increase with higher grades. [2]
Clinical Signs
In horses, early squamous cell carcinoma (SCC) lesions usually appear as persistent white plaques, raised nodules, warty growths, or non-healing sores. [3][8][11] Unlike ordinary wounds, they do not resolve on their own. [3]
As the tumor progresses, it often forms a firm mass with a characteristic cauliflower-like surface. [3] The tissue may ulcerate and become black or necrotic. [3][8] Some lesions develop into deep, crater-shaped defects, whereas others enlarge into bumpy, wart-like structures. [8]
Without treatment the tumor can invade surrounding tissues and metastasize. [11] Clinical signs vary with location: for example, stallions or geldings with genital SCC may strain to urinate or experience pain during mating. [3]
Causes
Like other forms of cancer, the causes of SCC have not been fully characterized, but genetic and environmental factors have been identified. [2][4][11]
One major contributing factor to SCC in horses is overexposure to UV light. [2][4] UV light has mutagenic properties, leading to changes in the genes that control cell growth and repair damaged DNA. These mutations allow cells to grow unchecked, which can result in tumors. [2]
Skin with no pigment is more vulnerable to these mutations because they absorb more UV light than skin with high concentrations of melanin, which disperses UV radiation. [2] Although the incidence of SCC on non-pigmented skin is much higher, pigmented skin can also be affected. [5]
Chronic inflammation is another factor in SCC. There appears to be a relationship between a high level of inflammatory markers and this condition. [2] There has also been a clear link made between SCC and equine papillomavirus (EPV-2), although not all horses with SCC test positive for EPV-2. [2][11]
Additionally, there appears to be a genetic component to this condition. Certain breeds and lineages have a higher prevalence of SCC. [2]
Health Factors
In addition to environmental and genetic factors, there are some predisposing health factors that influence the development of SCC in horses, including: [2][4][5]
- Disruption to enzymes involved in blood vessel formation
- Chronic keratosis
- Exposure to certain chemicals
- Chronic skin irritation
- Burns
- Poor wound healing
- Parasitic skin disease such as habronemiasis and onchocerciasis
In the case of SCC near the eyes, factors include: [5]
- Chronic conjunctivitis
- Chronic nasolacrimal duct obstruction
- Eyelid deformities
SCC is the most common type of tumor to affect the genitalia of male horses. Penile SCC tumors tend to be aggressive, especially if they develop in a young horse. [4] Female horses may also develop SCC in or around their genitalia. [4]
Penile SCC may be caused by a number of different factors, including: [2]
- Accumulation of smegma
- Chronic irritation
- Balanoposthitis (inflammation of the glans penis and prepuce)
Risk Factors
Squamous Cell Carcinoma is a common tumor found in horses. [2][7] Horses of all ages are at risk, but middle aged to older horses are at greater risk. [2][3][5][6]
SCC is most often associated with unpigmented skin, but can be found on any skin color or type and in other tissues. [2] Horses that have been chronically exposed to high levels of UV light are at greater risk. [2]
Additional risk factors for SCC in horses include: [3][6]
- Chronic skin irritation
- Castration
- Chronic inflammation
- Coat colour
- Poor genital hygiene
- Infectious agents
- Papilloma
- Trauma
- Burn scars
- Chronic non-healing wounds
Certain horse breeds are more likely to develop certain types of SCC tumors. Below is a breakdown of the types of SCC associated with at-risk breeds.
Table 2. Horse breed predisposition to types of squamous cell carcinoma. [3][4][6]
| Horse Breed | Common Types of SCC |
|---|---|
| Paint horse |
|
| Quarter horse |
|
| Draft horse |
|
| Appaloosa |
|
| Ponies |
|
| Arabian |
|
| Pinto |
|
Severity
The severity of SCC depends on the characterization of the tumors, specifically their: [2]
- Location
- Grade
- Aggressiveness/Spread
Some SCC tumors are slow-growing and benign, while others are aggressive and grow quickly. [4]
Veterinarians perform a “staging workup” after diagnosing SCC in horses. This process determines what grade the tumor has reached. The higher the grade, the more severe the SCC. [2]
Grades 1 and 2 tumors are easier to treat and often have a better prognosis. Grade 3 tumors are more severe as they have spread to other tissues in the body (metastasized). [2]
Even with treatment, severe cases of SCC tend to recur. When SCC recurs or spreads through the body, the prognosis worsens, although treatment may still be an option in some instances. [2]

Diagnosis
Early diagnosis and treatment create the best chance of a positive outcome in cases of equine SCC. [4] Horses that are suspected of having SCC require prompt veterinary attention.
Diagnosis of SCC localized to the outside of the body is usually based on a biopsy of the affected area. A sample of the tumor is sent for laboratory testing to confirm the presence of SCC cells. [4][8]
“If caught in its initial stages, Squamous Cell Carcinoma can often be successfully treated or managed. Horse owners should monitor for any unusual growths or changes in the skin, especially in at-risk breeds like Appaloosas and Paints, and consult their veterinarian promptly if they have concerns.”
— Dr. Jennifer Skaggs, DVMEquine Veterinarian
Internal cases also require a tissue biopsy to confirm diagnosis. Localization of internal tumors is guided by diagnostic tools that may include: [6]
- Gastroscopy: A small camera is passed through the horse’s nostril into the stomach
- Rectal examination: The rectum and anus are palpated for masses
- Abdominocentesis: A sample of fluid is taken from the abdominal cavity and sent for testing
- Diagnostic imaging: Ultrasonography is the primary method of imaging used to localize SCC
- Blood tests: May indicate the presence of cancer markers and help rule out other conditions
Treatment & Prognosis
The preferred treatment for squamous cell carcinoma in horses is surgical removal of the tumor. The aim of excision is to remove all of the tumor tissue with clean, wide margins, typically including 1–2 cm of healthy tissue beyond the visible lesion. Taking wide margins tries to ensure any microscopic cancer cells in adjacent tissue are eliminated and reduces the risk of recurrence. [2][4][11]
In some cases, adjunct treatment may also be recommended. Possible options include: [2][4][7][11][12]
- Radiation therapy
- Chemotherapy
- Photodynamic therapy
- Cryosurgery
- Radiofrequency hyperthermia
- Nonsteroidal Anti-inflammatory Drugs (NSAIDs)
In cases of penile SCC, removal of part or all of the prepuce or the penis may be necessary. [3][12]
The prognosis for a horse with SCC is unpredictable. [5] Even with treatment, recurrence rates are high, particularly in cases of tumors near the eyes. [2] The prognosis is graver for horses where SCC has metastasized. [2]
Horses with SCC of the stomach have a poor prognosis. This form of the disease does not usually get diagnosed before it has advanced to significant metastasis. [6]
Prevention
Since the causes of SCC are not fully understood, prevention is limited. However, like other forms of cancer, there are environmental and management strategies that can reduce risks for at-risk horses.
Prevention strategies include:
- Limiting exposure to UV light: Providing shade in turnout areas and using protective gear like UV-blocking fly masks or sheets can help shield vulnerable areas, especially in horses with light-colored or non-pigmented skin. Adjusting turnout times to avoid peak UV radiation hours (10 a.m. to 4 p.m.) can further reduce risk.
- Using sun protection: Applying horse-safe sunscreen to depigmented or pink areas, or using UV protecting face masks, offers additional protection against UV damage.
- Monitoring for abnormal growths: Regular cleaning and inspection of the skin can help identify potential issues early.
- Maintaining hygiene: Keeping the genitals clean is an important consideration, particularly for male horses, as smegma buildup has been associated with SCC of the penis and prepuce. Routine cleaning with mild, vet-approved solutions can help minimize irritation and inflammation, and provides an opportunity to monitor for any changes.
- Reducing viral exposure: Adhering to robust biosecurity and quarantine protocols reduces transmission of viruses like EPV-2, which is associated with SCC in horses, as there is no vaccine currently available.
- Managing existing skin conditions: Chronic irritation is associated with SCC. Ensure pre-existing skin conditions like sweet itch and rain scald are managed proactively to avoid persistent skin irritation.
Finally, providing a well-balanced, forage-first diet supports overall equine health and wellness. Staying up-to-date with routine care including veterinary check-ups, vaccinations, deworming, dental floatation and farriery provide the best chance of early detection and optimal outcomes.
Frequently Asked Questions
Here are some frequently asked questions about squamous cell carcinoma in horses:
Squamous cell carcinoma in horses is a cancerous tumor that starts in the squamous epithelial cells. These cells form the outer layer of the skin and line several internal surfaces. SCC can develop on the skin, around the eyes, on the genitals, in the mouth, in the stomach, or in other tissues, and it can become aggressive without treatment.
Squamous cell carcinoma can develop when genetic, environmental, or health factors cause abnormal cell changes. UV exposure on unpigmented skin is a major risk factor, but SCC is not limited to sun-exposed areas. Chronic irritation, inflammation, poor wound healing, parasitic skin disease, equine papillomavirus, and breed-related risk may also contribute.
Early signs of SCC often include white plaques, raised bumps, warty growths, or sores that do not heal. Unlike ordinary wounds, these areas usually persist or continue changing over time. As the tumor progresses, it may become firm, ulcerated, dark, crater-shaped, or cauliflower-like in appearance.
SCC can appear in many areas of the body, including the skin, tissues around the eye, genitals, mouth, nasal passage, throat, anus, ear canal, hoof, bladder, and stomach. Common external sites include unpigmented skin, the eyelids, the tips of the ears, and genital tissue.
Horses at higher risk for squamous cell carcinoma often have unpigmented skin, chronic UV exposure, chronic skin irritation, poor genital hygiene, or a history of non-healing wounds. Middle-aged and older horses are more commonly affected, although horses of any age can develop SCC. Paints, Appaloosas, Quarter Horses, Draft horses, Pintos, Arabians, and ponies may have breed-related risks.
Squamous cell carcinoma can spread into nearby tissues and may metastasize to other parts of the body. Risk of spread depends on tumor grade, location, and aggressiveness. Higher-grade tumors are more likely to behave aggressively, and cases with metastasis have a poorer prognosis than tumors found and treated early.
SCC is usually diagnosed through a biopsy, where a tissue sample from the abnormal area is tested in a laboratory. External tumors are often sampled directly, while internal tumors may require gastroscopy, rectal examination, abdominocentesis, ultrasound, or bloodwork to help locate the affected tissue and rule out other conditions.
Squamous cell carcinoma is graded based on how closely the tumor cells resemble normal tissue. Grade 1 tumors are usually slower growing and more organized, while Grade 3 tumors are poorly differentiated, more aggressive, and more likely to spread. Veterinarians use grading to guide treatment decisions and estimate prognosis.
Treatment for SCC most often involves surgical removal of the tumor with clean margins. Surgeons typically remove the visible mass along with about 1–2 cm (0.4–0.8 in) of nearby healthy tissue to reduce recurrence risk. Depending on the case, radiation therapy, chemotherapy, photodynamic therapy, cryosurgery, or anti-inflammatory drugs may also be used.
Prognosis for a horse with SCC depends on tumor location, grade, size, and whether the cancer has spread. Early, lower-grade tumors are often easier to treat. Tumors near the eyes may recur even after treatment, while stomach SCC usually has a poor prognosis because it is often diagnosed after it has advanced.
SCC cannot always be prevented, but risk can be reduced through UV protection, regular skin checks, and good hygiene. Shade, UV-blocking fly masks, protective sheets, and horse-safe sunscreen can help protect pink or unpigmented skin. Routine cleaning and inspection of genital areas may also help owners notice changes earlier.
A veterinarian should examine any persistent sore, raised growth, white plaque, wart-like lump, ulcerated area, or abnormal genital swelling that does not heal. SCC can become more difficult to treat as it grows or spreads, so prompt veterinary attention gives affected horses the best chance of a better outcome.
Summary
Squamous cell carcinoma is the most common form of skin cancer in horses. SCC affects squamous epithelial cells, which are the outermost layer of cells in certain tissues including skin and mucous membranes.
- SCC is most commonly found in the skin, especially near mucous membranes such as the eyes, the mouth, and genitalia.
- SCC tumors are graded on a scale of 1 to 3. Each grade represents increasing seriousness of tumor development.
- Overexposure to UV light, especially on non-pigmented skin, is the greatest risk factor for developing SCC.
- Other risk factors include equine papilloma virus infection, chronic inflammation, trauma, and genetic predisposition.
- The preferred treatment is surgical removal of the tumor. Other treatments include radiotherapy, chemotherapy, and cryosurgery.
- Prognosis depends on the location and grade of the tumor and the overall health of the horse. Early detection ensures the best possible outcome.
References
- Squamous Epithelial Cell - an Overview | ScienceDirect Topics.
- Hollis. A. R., Squamous Cell Carcinomas in Horses. Veterinary Clinics of North America: Equine Practice. 2024. View Summary
- Van Den Top. J. G. B. et al., Penile and Preputial Squamous Cell Carcinoma in the Horse and Proposal of a Classification System: Penis and Preputial Squamous Cell Carcinoma in the Horse. Equine Veterinary Education. 2011.
- Taylor. S. and Haldorson. G., A Review of Equine Mucocutaneous Squamous Cell Carcinoma. Equine Veterinary Education. 2013.
- Knottenbelt. D. C. and Croft. J. S., Cutaneous Squamous Cell Carcinoma ( SCC ): “What’s the Problem?”. Equine Veterinary Education. 2019.
- Taylor. S. D. et al., Gastric Neoplasia in Horses. Journal of Veterinary Internal Medicine. 2009. View Summary
- Moore. A. S. et al., Long‐term Control of Mucocutaneous Squamous Cell Carcinoma and Metastases in a Horse Using Piroxicam. Equine Veterinary Journal. 2003. View Summary
- Hewes. C. A. and Sullins. K. E., Review of the Treatment of Equine Cutaneous Neoplasia. AAEP Proceedings. 2009.
- Reed. S. M. et al., Equine Internal Medicine. 3rd ed. Saunders Elsevier, St. Louis, Mo. 2010.
- Blikslager. A. T. et al., Eds., The Equine Acute Abdomen. Third edition. Wiley, Blackwell, Hoboken, NJ. 2017.
- Sykora. S. and Brandt. S., Papillomavirus Infection and Squamous Cell Carcinoma in Horses. The Veterinary Journal. 2017. View Summary
- Van Den Top. J. G. B. et al., Penile and Preputial Squamous Cell Carcinoma in the Horse: A Retrospective Study of Treatment of 77 Affected Horses. Equine Veterinary Journal. 2008. View Summary