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Cytogenetics and cell genetics2001; 93(3-4); 291-296; doi: 10.1159/000057000

Chromosome homologies between man and mountain zebra (Equus zebra hartmannae) and description of a new ancestral synteny involving sequences homologous to human chromosomes 4 and 8.

Abstract: Using human chromosome painting probes, we looked for homologies between human and mountain zebra (Equus zebra hartmannae, Equidae, Perissodactyla) karyotypes. Except for two very short segments, all euchromatic regions were found to have a human homologous chromosome segment. Conserved syntenies previously described in various mammalian orders were detected. Each synteny corresponded to a chromosomal region homologous to two parts of human chromosomes: HSA3 and HSA21, HSA7 and HSA16, HSA12 and HSA22, and HSA16 and HSA19. Chromosomal segments homologous to a part of HSA11 and HSA19p are found syntenic in zebra, horse and donkey, suggesting that this group of synteny has been inherited from an Equidae or Perissodactyla common ancestor. A synteny of segments homologous to parts of HSA4 and HSA8 was observed in zebra and horse. It also exists in the rabbit (Lagomorpha) and several Carnivora species. A second group of taxa which does not have this region of synteny is composed of primates, Chiroptera and Insectivora, and possibly also Cetacea and Scandantia. Thus, the presence or absence of this region of synteny may separate two groups of eutherian mammals.
Publication Date: 2001-08-31 PubMed ID: 11528128DOI: 10.1159/000057000Google Scholar: Lookup
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  • Comparative Study
  • Journal Article

Summary

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The research paper explores the similarities between the chromosomes of humans and mountain zebras. Researchers discovered that almost all sites of the genetic material (euchromatin regions) contain segments homologous to those in humans, offering insight into inherited genetic structures and the evolutionary history of mammals.

Study Objectives and Methods

  • The primary goal of the research was to identify chromosome homologies, or similarities, between humans and mountain zebras.
  • Researchers used human chromosome painting probes in the study, a technique used to visualize specific regions of the genome under a microscope.
  • They examined mountain zebrah’s karyotypes – physical appearance of the chromosome – for comparison with the human genome.

Discoveries and Observations

  • The researchers found high degrees of similarity between most human genetic material and that of the mountain zebra. Apart from two very short segments, all examined areas (euchromatin – the most gene-rich part of the genome) showed homologous (similar) segments to human chromosomes.
  • They discovered conserved syntenies, which are blocks of genes inherited together due to their close proximity on the chromosome. These syntenies corresponded to specific regions homologous to parts of different human chromosomes.
  • The researchers also identified a new ancestral synteny that exists in a zebra and horse, which contains parts homologous to HSA4 and HSA8 of the human chromosomes.

Implications and Conclusions

  • The detection of synteny groups suggests that these have been inherited from a common ancestor within the Equidae or Perissodactyla (odd-toed ungulates) families.
  • The newly found syntenic region, related to HSA4 and HSA8, also exists in a rabbit and several carnivore species.
  • Importantly, this region of synteny is not present in some other groups, such as primates, bats, insect-eating mammals, and possibly also whales and tree shrews (Cetacea and Scandentia).
  • Consequently, the presence or absence of this particular synteny could be used to separate two groups of placental (eutherian) mammals.
  • The study as such contributes valuable information about mammalian evolution and can help understand the complex processes leading to the current genetic diversity among mammals.

Cite This Article

APA
Richard F, Messaoudi C, Lombard M, Dutrillaux B. (2001). Chromosome homologies between man and mountain zebra (Equus zebra hartmannae) and description of a new ancestral synteny involving sequences homologous to human chromosomes 4 and 8. Cytogenet Cell Genet, 93(3-4), 291-296. https://doi.org/10.1159/000057000

Publication

ISSN: 0301-0171
NlmUniqueID: 0367735
Country: Switzerland
Language: English
Volume: 93
Issue: 3-4
Pages: 291-296

Researcher Affiliations

Richard, F
  • UMR 147 CNRS, Institut Curie, Section Recherche, Paris, France. florence.richard@curie.fr
Messaoudi, C
    Lombard, M
      Dutrillaux, B

        MeSH Terms

        • Animals
        • Chromosome Banding
        • Chromosomes, Human, Pair 4 / genetics
        • Chromosomes, Human, Pair 8 / genetics
        • Conserved Sequence / genetics
        • Equidae / genetics
        • Evolution, Molecular
        • Horses / genetics
        • Humans
        • In Situ Hybridization, Fluorescence
        • Karyotyping
        • Sequence Homology, Nucleic Acid

        Citations

        This article has been cited 10 times.
        1. Musilova P, Kubickova S, Vahala J, Rubes J. Subchromosomal karyotype evolution in Equidae.. Chromosome Res 2013 Apr;21(2):175-87.
          doi: 10.1007/s10577-013-9346-zpubmed: 23532666google scholar: lookup
        2. Musilova P, Kubickova S, Horin P, Vodicka R, Rubes J. Karyotypic relationships in Asiatic asses (kulan and kiang) as defined using horse chromosome arm-specific and region-specific probes.. Chromosome Res 2009;17(6):783-90.
          doi: 10.1007/s10577-009-9069-3pubmed: 19731053google scholar: lookup
        3. Trifonov VA, Stanyon R, Nesterenko AI, Fu B, Perelman PL, O'Brien PC, Stone G, Rubtsova NV, Houck ML, Robinson TJ, Ferguson-Smith MA, Dobigny G, Graphodatsky AS, Yang F. Multidirectional cross-species painting illuminates the history of karyotypic evolution in Perissodactyla.. Chromosome Res 2008;16(1):89-107.
          doi: 10.1007/s10577-007-1201-7pubmed: 18293107google scholar: lookup
        4. Musilova P, Kubickova S, Zrnova E, Horin P, Vahala J, Rubes J. Karyotypic relationships among Equus grevyi, Equus burchelli and domestic horse defined using horse chromosome arm-specific probes.. Chromosome Res 2007;15(6):807-13.
          doi: 10.1007/s10577-007-1164-8pubmed: 17874215google scholar: lookup
        5. Yang F, Fu B, O'Brien PC, Nie W, Ryder OA, Ferguson-Smith MA. Refined genome-wide comparative map of the domestic horse, donkey and human based on cross-species chromosome painting: insight into the occasional fertility of mules.. Chromosome Res 2004;12(1):65-76.
        6. Richard F, Lombard M, Dutrillaux B. Reconstruction of the ancestral karyotype of eutherian mammals.. Chromosome Res 2003;11(6):605-18.
          doi: 10.1023/a:1024957002755pubmed: 14516069google scholar: lookup
        7. Richard F, Messaoudi C, Bonnet-Garnier A, Lombard M, Dutrillaux B. Highly conserved chromosomes in an Asian squirrel (Menetes berdmorei, Rodentia: Sciuridae) as demonstrated by ZOO-FISH with human probes.. Chromosome Res 2003;11(6):597-603.
          doi: 10.1023/a:1024905018685pubmed: 14516068google scholar: lookup
        8. Frönicke L, Wienberg J, Stone G, Adams L, Stanyon R. Towards the delineation of the ancestral eutherian genome organization: comparative genome maps of human and the African elephant (Loxodonta africana) generated by chromosome painting.. Proc Biol Sci 2003 Jul 7;270(1522):1331-40.
          doi: 10.1098/rspb.2003.2383pubmed: 12965023google scholar: lookup
        9. Santani A, Raudsepp T, Chowdhary BP. Interstitial telomeric sites and NORs in Hartmann's zebra (Equus zebra hartmannae) chromosomes.. Chromosome Res 2002;10(7):527-34.
          doi: 10.1023/a:1020945400949pubmed: 12498342google scholar: lookup
        10. Volleth M, Heller KG, Pfeiffer RA, Hameister H. A comparative ZOO-FISH analysis in bats elucidates the phylogenetic relationships between Megachiroptera and five microchiropteran families.. Chromosome Res 2002;10(6):477-97.
          doi: 10.1023/a:1020992330679pubmed: 12489830google scholar: lookup