Chronic progressive lymphoedema in Friesian horses: suggestive phenotype of affected horses and genome-wide association study.
Abstract: Chronic progressive lymphoedema (CPL) is a disabling condition affecting various draft horse breeds, including Friesian horses. Objective: The high incidence of CPL in Friesian horses suggests a genetic component and a predisposing phenotype. Methods: For the genomic study, 26 affected and 19 control horses were evaluated. Body measurements were taken from 28 affected and nine control Friesian horses. Methods: Axiom® Equine Genotyping Array with a total of 307,474 single nucleotide polymorphism (SNPs) was used for the case/control genome-wide association study (GWAS). Height, weight and leg measurements (seven different body measurements) were obtained and compared between groups. Results: No significant associations were identified with the GWAS. There were significant differences (P < 0.05) in gaskin length measurements between CPL-affected horses and controls. Conclusions: The current study suggests that the potential genetic contribution to CPL in Friesian horses is complex and may include other SNP-associated factors. Significantly increased gaskin length of affected horses suggests a phenotype prone to developing CPL.
© 2019 ESVD and ACVD.
Publication Date: 2020-01-06 PubMed ID: 31908060DOI: 10.1111/vde.12831Google Scholar: Lookup
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- Journal Article
Summary
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The study investigates chronic progressive lymphoedema (CPL), a disabling condition common in draft horse breeds like Friesian horses, and explores its potential genetic components and possible predisposing physical traits.
Objective of the Research
- The main goal of this research was to determine whether a genetic component and a predisposing phenotype account for the high incidence of CPL in Friesian horses.
Methodology
- For this genomic study, a total of 45 horses were utilized, 26 of which were affected by the condition, and 19 served as controls.
- Body measurements were taken from 37 horses; including 28 affected and nine control Friesian horses.
- The researchers employed an Axiom® Equine Genotyping Array for the genome-wide association study (GWAS), which assessed a total of 307,474 single nucleotide polymorphisms (SNPs).
- Measurements such as height, weight, and seven different measurements related to the horse’s leg were collected and compared between the groups.
Results
- The research did not uncover significant associations through the GWAS.
- However, statistically significant differences (P < 0.05) were observed when comparing the gaskin length measurements (part of the horse's leg) between horses affected by CPL and the control group.
Conclusions
- The research identified that the potential genetic contribution to CPL in Friesian horses is complex and may be influenced by other SNP-associated factors.
- The finding of increased gaskin length in the CPL-affected horses suggests that this may be a physical trait that makes these horses more prone to developing the condition.
Cite This Article
APA
Affolter VK, Dalley B, Kass PH, Brown EA, Sonder C, Bannasch DL.
(2020).
Chronic progressive lymphoedema in Friesian horses: suggestive phenotype of affected horses and genome-wide association study.
Vet Dermatol, 31(3), 234-e51.
https://doi.org/10.1111/vde.12831 Publication
Researcher Affiliations
- Department of Pathology, Microbiology, Immunology, School of Veterinary Medicine, University California, Davis, One Garrod Drive, Davis, CA, 95616, USA.
- Department of Population Health and Reproduction, School of Veterinary Medicine, University California, Davis, One Garrod Drive, Davis, CA, 95616, USA.
- Department of Medicine and Epidemiology, School of Veterinary Medicine, University California, Davis, One Shields Avenue, Davis, CA, 95616, USA.
- Department of Pathology, Microbiology, Immunology, School of Veterinary Medicine, University California, Davis, One Garrod Drive, Davis, CA, 95616, USA.
- UC Davis Center for Equine Health, One Shields Avenue, Davis, CA, 95616, USA.
- Department of Population Health and Reproduction, School of Veterinary Medicine, University California, Davis, One Garrod Drive, Davis, CA, 95616, USA.
MeSH Terms
- Animals
- Breeding
- Case-Control Studies
- Chronic Disease / veterinary
- Disease Progression
- Genetic Predisposition to Disease
- Genome-Wide Association Study / veterinary
- Horse Diseases / genetics
- Horse Diseases / physiopathology
- Horses / genetics
- Lymphedema / genetics
- Lymphedema / physiopathology
- Lymphedema / veterinary
- Phenotype
Grant Funding
- UC Davis Center for Equine Health
- University California, Davis
- Fenway Foundation
References
This article includes 15 references
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