Cytologic scoring of equine exercise-induced pulmonary hemorrhage: Performance of human experts and a deep learning-based algorithm.
Abstract: Exercise-induced pulmonary hemorrhage (EIPH) is a relevant respiratory disease in sport horses, which can be diagnosed by examination of bronchoalveolar lavage fluid (BALF) cells using the total hemosiderin score (THS). The aim of this study was to evaluate the diagnostic accuracy and reproducibility of annotators and to validate a deep learning-based algorithm for the THS. Digitized cytological specimens stained for iron were prepared from 52 equine BALF samples. Ten annotators produced a THS for each slide according to published methods. The reference methods for comparing annotator's and algorithmic performance included a ground truth dataset, the mean annotators' THSs, and chemical iron measurements. Results of the study showed that annotators had marked interobserver variability of the THS, which was mostly due to a systematic error between annotators in grading the intracytoplasmatic hemosiderin content of individual macrophages. Regarding overall measurement error between the annotators, 87.7% of the variance could be reduced by using standardized grades based on the ground truth. The algorithm was highly consistent with the ground truth in assigning hemosiderin grades. Compared with the ground truth THS, annotators had an accuracy of diagnosing EIPH (THS of < or ≥ 75) of 75.7%, whereas, the algorithm had an accuracy of 92.3% with no relevant differences in correlation with chemical iron measurements. The results show that deep learning-based algorithms are useful for improving reproducibility and routine applicability of the THS. For THS by experts, a diagnostic uncertainty interval of 40 to 110 is proposed. THSs within this interval have insufficient reproducibility regarding the EIPH diagnosis.
Publication Date: 2022-11-17 PubMed ID: 36384369PubMed Central: PMC9827485DOI: 10.1177/03009858221137582Google Scholar: Lookup
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- Journal Article
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Summary
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The study revolves around assessing the performance of human experts and a deep learning algorithm in diagnosing a horse respiratory disease called exercise-induced pulmonary hemorrhage (EIPH), using a method known as the total hemosiderin score (THS). The research determined that the deep learning algorithm had a higher level of accuracy in diagnosing EIPH than human experts and was able to reduce variation in measurements.
Study Design
- The study included bronchoalveolar lavage fluid (BALF) samples from 52 horses, which were examined and categorized for signs of EIPH.
- These assessments were done by ten annotators or human experts, who determined a THS for each sample following standard methods.
- Meanwhile, a deep learning algorithm was also programmed to assign a THS to each sample.
- Three reference methods were used to gauge the efficacy of both the annotators and the algorithm: a ground truth dataset, mean scores of the annotators, and chemical iron measurements.
Annotators’ Performance
- The researchers found that the human annotators displayed significant variability in their THS assignment, primarily caused by differing interpretations of the amount of hemosiderin content in individual macrophages.
- By using standardized grades derived from the ground truth, the variation in measurements done by the annotators could be reduced by 87.7%.
- Compared to the ground truth THS, annotators were 75.7% accurate in diagnosing EIPH.
Algorithm’s Performance
- On the other hand, the deep learning algorithm demonstrated consistency with the ground truth when assigning hemosiderin grades.
- Its accuracy in diagnosing EIPH was higher, at 92.3%, and showed no meaningful differences when compared to chemical iron measurements.
Conclusions and Recommendations
- Based on these findings, the researchers surmise that deep learning algorithms can help enhance the reproducibility and routine use of the THS method in diagnosing EIPH.
- They also propose a diagnostic uncertainty interval of 40 to 110 for expert-assigned THS, which suggests those scores that fall within this range are deemed to lack sufficient reproducibility in diagnosing EIPH.
Cite This Article
APA
Bertram CA, Marzahl C, Bartel A, Stayt J, Bonsembiante F, Beeler-Marfisi J, Barton AK, Brocca G, Gelain ME, Gläsel A, Preez KD, Weiler K, Weissenbacher-Lang C, Breininger K, Aubreville M, Maier A, Klopfleisch R, Hill J.
(2022).
Cytologic scoring of equine exercise-induced pulmonary hemorrhage: Performance of human experts and a deep learning-based algorithm.
Vet Pathol, 60(1), 75-85.
https://doi.org/10.1177/03009858221137582 Publication
Researcher Affiliations
- University of Veterinary Medicine Vienna, Vienna, Austria.
- Freie Universität Berlin, Berlin, Germany.
- Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany.
- EUROIMMUN Medizinische Labordiagnostika AG, Lübeck, Germany.
- Freie Universität Berlin, Berlin, Germany.
- Novavet Diagnostics, Bayswater, Western Australia.
- University of Padova, Legnaro, Italy.
- University of Guelph, Guelph, Ontario, Canada.
- Freie Universität Berlin, Berlin, Germany.
- University of Padova, Legnaro, Italy.
- University of Padova, Legnaro, Italy.
- Justus-Liebig-Universität Giessen, Giessen, Germany.
- University of Pretoria, Pretoria, South Africa.
- Justus-Liebig-Universität Giessen, Giessen, Germany.
- University of Veterinary Medicine Vienna, Vienna, Austria.
- Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany.
- Technische Hochschule Ingolstadt, Ingolstadt, Germany.
- Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany.
- Freie Universität Berlin, Berlin, Germany.
- Novavet Diagnostics, Bayswater, Western Australia.
MeSH Terms
- Animals
- Bronchoalveolar Lavage Fluid
- Deep Learning
- Hemorrhage / diagnosis
- Hemorrhage / veterinary
- Hemosiderin
- Horse Diseases / diagnosis
- Horses
- Iron
- Lung Diseases / diagnosis
- Lung Diseases / veterinary
- Reproducibility of Results
Conflict of Interest Statement
The author(s) declared no potential conflicts of interest with respect to the
research, authorship, and/or publication of this article.
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Citations
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