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Effects of a 10-year conservation programme on the genetic diversity of the Pottoka pony–new clues regarding their origin.

Abstract: Here, we present the results of a genetic analysis of 463 Pottoka ponies corresponding to four generations, using 17 microsatellite markers. Ten years after the beginning of the Pottoka conservation programme, the values for the genetic diversity of the breed are still high and stable, indicating the success of the programme. We found null alleles in Pottoka for the ASB23, HMS3 and HTG10 microsatellites. Together with information obtained from other pony breeds from the Iberian Peninsula, this finding indicates that these microsatellites should not be used for phylogenetic analyses or parentage tests, at least for these breeds. The high heterozygosity exhibited by this breed in comparison to other ponies, together with its genetic proximity to the centroid of the allele frequencies, suggest that Pottoka allele frequencies are close to those initially exhibited by the ancestors of current European ponies. The results obtained in the current work, together with results from previous studies of ponies and horses from the Iberian Peninsula, corroborate the idea of a unique origin of all ponies from the European Atlantic Area. In contrast, our results do not corroborate the idea that these are derived from a domestication event in the Iberian Peninsula, nor that they have incorporated ancient Iberian horse genes into their genetic pool to a larger extent than other horse breeds.
Publication Date: 2011-09-12 PubMed ID: 22583328DOI: 10.1111/j.1439-0388.2011.00955.xGoogle Scholar: Lookup
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  • Journal Article
  • Research Support
  • Non-U.S. Gov't

Summary

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The research paper studies the genetic diversity and origin of the Pottoka pony breed, based on data gathered over ten years of conservation efforts. The findings suggest a stable, high genetic diversity within the breed, and the possibility of a unique origin of all ponies from the European Atlantic Area.

Methodology

  • The study involved the genetic analysis of 463 Pottoka ponies from four generations. The genetic screening was done using 17 microsatellite markers.
  • The research was conducted ten years after the commencement of a Pottoka conservation programme. The status of the genetic diversity of the breed at this point was therefore evaluated to gauge the impact of said initiative.

Key Findings

  • The study found that the conservation programme had been largely successful, as the Pottoka breed still maintained a high and stable genetic diversity even after ten years.
  • During the genetic testing, null alleles were discovered in the Pottoka breed for three specific microsatellites (ASB23, HMS3, and HTG10). This development was valuable as it indicated that these microsatellites shouldn’t be used for ancestor or parentage detection tests, at least for the Pottoka breed and possibly similar pony breeds found in the Iberian Peninsula.
  • A high level of heterozygosity was observed in the breed, suggesting that the allele frequencies of the ponies were possibly close to that of their ancient ancestors.

Interpretation and Conclusion

  • The results of this study, alongside previous research, uphold the proposition of a single origin for all pony breeds in the European Atlantic Area.
  • Contrary to earlier theories, the results did not support the idea that the ponies derived from a singular domestication event in the Iberian Peninsula. It was also concluded that they haven’t significantly incorporated ancient Iberian horse genes into their genetic pool more than other horse breeds.

Cite This Article

APA
Rendo F, Iriondo M, Manzano C, Estonba A. (2011). Effects of a 10-year conservation programme on the genetic diversity of the Pottoka pony–new clues regarding their origin. J Anim Breed Genet, 129(3), 234-243. https://doi.org/10.1111/j.1439-0388.2011.00955.x

Publication

ISSN: 1439-0388
NlmUniqueID: 100955807
Country: Germany
Language: English
Volume: 129
Issue: 3
Pages: 234-243

Researcher Affiliations

Rendo, F
  • Department of Genetics, Physical Anthropology and Animal Physiology, Faculty of Science and Technology, University of the Basque Country, Bilbao, Spain.
Iriondo, M
    Manzano, C
      Estonba, A

        MeSH Terms

        • Animals
        • Conservation of Natural Resources / methods
        • Female
        • Gene Frequency / genetics
        • Genetic Variation
        • Heterozygote
        • Horses / genetics
        • Male
        • Phylogeny
        • Time Factors

        Citations

        This article has been cited 8 times.
        1. Grillaert K. Aggression, Erection, and Masturbation in Feral Pottoka Ponies and Implications for Equine Welfare.. Animals (Basel) 2022 Feb 10;12(4).
          doi: 10.3390/ani12040421pubmed: 35203129google scholar: lookup
        2. Fornal A, Kowalska K, Zabek T, Piestrzynska-Kajtoch A, Musiał AD, Ropka-Molik K. Genetic Diversity and Population Structure of Polish Konik Horse Based on Individuals from All the Male Founder Lines and Microsatellite Markers.. Animals (Basel) 2020 Sep 3;10(9).
          doi: 10.3390/ani10091569pubmed: 32899310google scholar: lookup
        3. Li J, Zhao B, Chen Y, Zhao B, Yang N, Hu S, Shen J, Wu X. A Genetic Evaluation System for New Zealand White Rabbit Germplasm Resources Based on SSR Markers.. Animals (Basel) 2020 Jul 24;10(8).
          doi: 10.3390/ani10081258pubmed: 32722175google scholar: lookup
        4. Funk SM, Guedaoura S, Juras R, Raziq A, Landolsi F, Luís C, Martínez AM, Musa Mayaki A, Mujica F, Oom MDM, Ouragh L, Stranger YM, Vega-Pla JL, Cothran EG. Major inconsistencies of inferred population genetic structure estimated in a large set of domestic horse breeds using microsatellites.. Ecol Evol 2020 May;10(10):4261-4279.
          doi: 10.1002/ece3.6195pubmed: 32489595google scholar: lookup
        5. Winton CL, McMahon R, Hegarty MJ, McEwan NR, Davies-Morel MCG, Morgan C, Nash DM. Genetic diversity within and between British and Irish breeds: The maternal and paternal history of native ponies.. Ecol Evol 2020 Feb;10(3):1352-1367.
          doi: 10.1002/ece3.5989pubmed: 32076519google scholar: lookup
        6. Winton CL, Plante Y, Hind P, McMahon R, Hegarty MJ, McEwan NR, Davies-Morel MC, Morgan CM, Powell W, Nash DM. Comparative genetic diversity in a sample of pony breeds from the U.K. and North America: a case study in the conservation of global genetic resources.. Ecol Evol 2015 Aug;5(16):3507-22.
          doi: 10.1002/ece3.1562pubmed: 26380682google scholar: lookup
        7. Janova E, Futas J, Klumplerova M, Putnova L, Vrtkova I, Vyskocil M, Frolkova P, Horin P. Genetic diversity and conservation in a small endangered horse population.. J Appl Genet 2013 Aug;54(3):285-92.
          doi: 10.1007/s13353-013-0151-3pubmed: 23649723google scholar: lookup
        8. Winton CL, Hegarty MJ, McMahon R, Slavov GT, McEwan NR, Davies-Morel MC, Morgan CM, Powell W, Nash DM. Genetic diversity and phylogenetic analysis of native mountain ponies of Britain and Ireland reveals a novel rare population.. Ecol Evol 2013 Apr;3(4):934-47.
          doi: 10.1002/ece3.507pubmed: 23610635google scholar: lookup