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Animal genetics2013; 44(6); 766-769; doi: 10.1111/age.12064

Equine developmental orthopaedic diseases–a genome-wide association study of first phalanx plantar osteochondral fragments in Standardbred trotters.

Abstract: Palmar/plantar osteochondral fragments (POF) in fetlock joints commonly affect and influence the athletic performance of horses. In this study, we used the Equine SNP50 BeadChip® to perform a genome-wide association study of metatarsophalangeal POF in 176 Norwegian Standardbred trotter yearlings. Putative quantitative trait loci (QTL) for medial and/or lateral POF, and medial POF only were identified on ECA1, 2, 7, 9 and 31, whereas for lateral POF, only on ECA7, 11, 27 and X. The moderate number of QTL evidences a complex inheritance and suggests various genes controlling POF development in medial and lateral locations.
Publication Date: 2013-06-07 PubMed ID: 23742657DOI: 10.1111/age.12064Google Scholar: Lookup
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  • Journal Article
  • Research Support
  • Non-U.S. Gov't
  • Research Support
  • U.S. Gov't
  • Non-P.H.S.

Summary

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This research article focuses on the genetic study of a common orthopedic disease in horses, specifically Standardbred trotters. The study explored the genes associated with osteochondral fragments in the fetlock joints of these horses.

Objective of the Research

  • The main objective of this research was to study and understand the genetics behind the development of palmar/plantar osteochondral fragments (POF) in fetlock joints of Standardbred trotters. This condition commonly affects the athletic performance of horses.

Methodology

  • The researchers utilized the Equine SNP50 BeadChip® for a genome-wide association study of this condition.
  • The equine genome was studied in 176 Norwegian Standardbred trotter yearlings.

Findings

  • The researchers discovered potential quantitative trait loci (QTL) associated with medial and/or lateral POF on ECA1, 2, 7, 9 and 31 chromosomes.
  • For lateral POF alone, possible associated QTLs were identified on ECA7, 11, 27 and X chromosomes.
  • The moderate number of QTL indicates a complex inheritance process and suggests that POF development can be controlled by various genes at medial and lateral locations.

Significance of the Study

  • This research provides valuable insights into the genetics behind an orthopedic condition common in horses, particularly Standardbred trotters.
  • The identification of possible QTL can aid in early disease detection, better treatment options, and could lead to potential breeding strategies to minimize the occurrence of this condition in horses.
  • The research further affirms the complexity of genetic inheritance of this condition and suggests the involvement of various genes in determining its development.

Cite This Article

APA
Lykkjen S, Dolvik NI, McCue ME, Rendahl AK, Mickelson JR, Røed KH. (2013). Equine developmental orthopaedic diseases–a genome-wide association study of first phalanx plantar osteochondral fragments in Standardbred trotters. Anim Genet, 44(6), 766-769. https://doi.org/10.1111/age.12064

Publication

ISSN: 1365-2052
NlmUniqueID: 8605704
Country: England
Language: English
Volume: 44
Issue: 6
Pages: 766-769

Researcher Affiliations

Lykkjen, S
  • Department of Basic Sciences and Aquatic Medicine, The Norwegian School of Veterinary Science, Post-box 8146 Dep., N-0033, Oslo, Norway; Department of Companion Animal Clinical Sciences, Section for Equine Medicine and Surgery, The Norwegian School of Veterinary Science, Post-box 8146 Dep, N-0033, Oslo, Norway.
Dolvik, N I
    McCue, M E
      Rendahl, A K
        Mickelson, J R
          Røed, K H

            MeSH Terms

            • Animals
            • Genome-Wide Association Study / veterinary
            • Horse Diseases / diagnostic imaging
            • Horse Diseases / genetics
            • Horses
            • Joint Diseases / diagnostic imaging
            • Joint Diseases / genetics
            • Joint Diseases / veterinary
            • Logistic Models
            • Norway
            • Oligonucleotide Array Sequence Analysis / veterinary
            • Polymorphism, Single Nucleotide / genetics
            • Radiography

            Grant Funding

            • P30 AR057220 / NIAMS NIH HHS

            Citations

            This article has been cited 5 times.
            1. Velie BD, Fegraeus KJ, Solé M, Rosengren MK, Røed KH, Ihler CF, Strand E, Lindgren G. A genome-wide association study for harness racing success in the Norwegian-Swedish coldblooded trotter reveals genes for learning and energy metabolism. BMC Genet 2018 Aug 29;19(1):80.
              doi: 10.1186/s12863-018-0670-3pubmed: 30157760google scholar: lookup
            2. Lewczuk D, Bereznowski A, Hecold M, Frąszczak M, Ruść A, Korwin-Kossakowska A, Szyda J, Kamiński S. Differences between horse selection based on two forms of osteochondrosis in fetlock. J Appl Genet 2018 May;59(2):225-230.
              doi: 10.1007/s13353-018-0437-6pubmed: 29524049google scholar: lookup
            3. Schaefer RJ, Schubert M, Bailey E, Bannasch DL, Barrey E, Bar-Gal GK, Brem G, Brooks SA, Distl O, Fries R, Finno CJ, Gerber V, Haase B, Jagannathan V, Kalbfleisch T, Leeb T, Lindgren G, Lopes MS, Mach N, da Câmara Machado A, MacLeod JN, McCoy A, Metzger J, Penedo C, Polani S, Rieder S, Tammen I, Tetens J, Thaller G, Verini-Supplizi A, Wade CM, Wallner B, Orlando L, Mickelson JR, McCue ME. Developing a 670k genotyping array to tag ~2M SNPs across 24 horse breeds. BMC Genomics 2017 Jul 27;18(1):565.
              doi: 10.1186/s12864-017-3943-8pubmed: 28750625google scholar: lookup
            4. McQueen CM, Dindot SV, Foster MJ, Cohen ND. Genetic Susceptibility to Rhodococcus equi. J Vet Intern Med 2015 Nov-Dec;29(6):1648-59.
              doi: 10.1111/jvim.13616pubmed: 26340305google scholar: lookup
            5. McQueen CM, Doan R, Dindot SV, Bourquin JR, Zlatev ZZ, Chaffin MK, Blodgett GP, Ivanov I, Cohen ND. Identification of genomic loci associated with Rhodococcus equi susceptibility in foals. PLoS One 2014;9(6):e98710.
              doi: 10.1371/journal.pone.0098710pubmed: 24892408google scholar: lookup