Genetic analysis of equine rotavirus by RNA-RNA hybridization.
Abstract: Serotype G3 equine rotaviruses isolated in Japan made up a common genogroup and were classified into two different genotypes. The genomes of serotype G3 equine rotaviruses with an identical electropherotype (isolated from 1982 to 1989) were very closely related to each other regardless of the year in which they were isolated. Serotype G3 equine rotavirus BI originating from England belonged to the same genogroup of serotype G3 equine rotaviruses isolated in Japan, although BI was classified as having a different genotype. The genomes of both serotype G10 equine rotavirus R-22 and serotype G10 calf rotavirus were closely related to each other.
Publication Date: 1994-08-01 PubMed ID: 7989559PubMed Central: PMC263921DOI: 10.1128/jcm.32.8.2009-2012.1994Google Scholar: Lookup
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- Comparative Study
- Journal Article
Summary
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The research article discusses the genetic analysis of equine rotavirus, a virus that causes diarrhoea in horses. The study found that certain serotypes of the virus isolated in Japan shared common genetic traits and that these traits were largely consistent across different years of isolation.
Study Overview
- The research focused on serotype G3 equine rotaviruses—specific variations of the virus—that were isolated in Japan.
- Researchers categorized these serotype G3 equine rotaviruses into a single genogroup, but differentiated them into two genotypes.
- The study found that these rotaviruses shared closely related genomes, irrespective of the year of their isolation. This suggests a notable level of genetic stability among these viruses over time.
Comparison with Other Variations
- A specific serotype G3 equine rotavirus called BI, originating from England, was analyzed and found to belong to the same genogroup as the ones isolated in Japan.
- However, the BI virus was classified into a different genotype. This indicates that while they may belong to the same larger group, there are genetic differences between the viruses isolated in Japan and the BI virus from England.
- Furthermore, the research found close genetic relations between the genomes of serotype G10 equine rotavirus and serotype G10 calf rotavirus. This suggests a possible shared ancestry or similar evolutionary paths for these viruses.
Implications of the Research
- Understanding the genetic structure and relations of these viruses can contribute to the development of more effective treatments and preventive measures against equine rotavirus.
- The genetic consistency over time signifies that historic isolates might still be relevant for current research and development of treatments.
- The close relation between equine and calf rotavirus could imply that findings from one could possibly be applied to the other, broadening the scope of potential benefits from this research.
Cite This Article
APA
Imagawa H, Ishida S, Uesugi S, Masanobu K, Fukunaga Y, Nakagomi O.
(1994).
Genetic analysis of equine rotavirus by RNA-RNA hybridization.
J Clin Microbiol, 32(8), 2009-2012.
https://doi.org/10.1128/jcm.32.8.2009-2012.1994 Publication
Researcher Affiliations
- Epizootic Research Station, Equine Research Institute, Japan Racing Association, Tochigi.
MeSH Terms
- Animals
- Cattle
- Cattle Diseases / epidemiology
- Cattle Diseases / virology
- England / epidemiology
- Horse Diseases / epidemiology
- Horse Diseases / virology
- Horses
- Japan / epidemiology
- Nucleic Acid Hybridization
- RNA, Viral / genetics
- Rotavirus / classification
- Rotavirus / genetics
- Rotavirus Infections / epidemiology
- Rotavirus Infections / veterinary
- Serotyping
References
This article includes 24 references
- Murakami Y, Nishioka N, Hashiguchi Y, Kuniyasu C. Serotypes of bovine rotaviruses distinguished by serum neutralization.. Infect Immun 1983 Jun;40(3):851-5.
- Takagi M, Hoshi A, Ohta C, Shirahata T, Goto H, Urasawa T, Taniguchi K, Urasawa S. A minor prevalent strain in a severe outbreak of foal diarrhea associated with serotype 3 rotavirus.. J Vet Med Sci 1993 Aug;55(4):661-3.
- Hoshino Y, Wyatt RG, Greenberg HB, Kalica AR, Flores J, Kapikian AZ. Isolation and characterization of an equine rotavirus.. J Clin Microbiol 1983 Sep;18(3):585-91.
- Imagawa H, Wada R, Hirasawa K, Akiyama Y, Oda T. Isolation of equine rotavirus in cell cultures from foals with diarrhea.. Nihon Juigaku Zasshi 1984 Feb;46(1):1-9.
- Flores J, Hoshino Y, Boeggeman E, Purcell R, Chanock RM, Kapikian AZ. Genetic relatedness among animal rotaviruses.. Arch Virol 1986;87(3-4):273-85.
- Nakagomi O, Nakagomi T, Hoshino Y, Flores J, Kapikian AZ. Genetic analysis of a human rotavirus that belongs to subgroup I but has an RNA pattern typical of subgroup II human rotaviruses.. J Clin Microbiol 1987 Jul;25(7):1159-64.
- Nakagomi T, Nakagomi O. RNA-RNA hybridization identifies a human rotavirus that is genetically related to feline rotavirus.. J Virol 1989 Mar;63(3):1431-4.
- Nakagomi T, Matsuda Y, Ohshima A, Mochizuki M, Nakagomi O. Characterization of a canine rotavirus strain by neutralization and molecular hybridization assays.. Arch Virol 1989;106(1-2):145-50.
- Nakagomi O, Nakagomi T, Akatani K, Ikegami N. Identification of rotavirus genogroups by RNA-RNA hybridization.. Mol Cell Probes 1989 Sep;3(3):251-61.
- Snodgrass DR, Fitzgerald T, Campbell I, Scott FM, Browning GF, Miller DL, Herring AJ, Greenberg HB. Rotavirus serotypes 6 and 10 predominate in cattle.. J Clin Microbiol 1990 Mar;28(3):504-7.
- Nakagomi O, Ohshima A, Aboudy Y, Shif I, Mochizuki M, Nakagomi T, Gotlieb-Stematsky T. Molecular identification by RNA-RNA hybridization of a human rotavirus that is closely related to rotaviruses of feline and canine origin.. J Clin Microbiol 1990 Jun;28(6):1198-203.
- Ohta C, Hoshi A, Goto H, Tsunoda N, Tagami M, Akita H. Epizootiological and virological studies of foal diarrhea associated with serotype 3 rotavirus.. Nihon Juigaku Zasshi 1990 Oct;52(5):1049-56.
- Browning GF, Chalmers RM, Fitzgerald TA, Snodgrass DR. Serological and genomic characterization of L338, a novel equine group A rotavirus G serotype.. J Gen Virol 1991 May;72 ( Pt 5):1059-64.
- Hardy ME, Woode GN, Xu ZC, Williams JD, Conner ME, Dwyer RM, Powell DG. Analysis of serotypes and electropherotypes of equine rotaviruses isolated in the United States.. J Clin Microbiol 1991 May;29(5):889-93.
- Nakagomi O, Nakagomi T. Genetic diversity and similarity among mammalian rotaviruses in relation to interspecies transmission of rotavirus.. Arch Virol 1991;120(1-2):43-55.
- Mochizuki M, Nakagomi O, Shibata S. Hemagglutinin activity of two distinct genogroups of feline and canine rotavirus strains.. Arch Virol 1992;122(3-4):373-81.
- Browning GF, Fitzgerald TA, Chalmers RM, Snodgrass DR. A novel group A rotavirus G serotype: serological and genomic characterization of equine isolate FI23.. J Clin Microbiol 1991 Sep;29(9):2043-6.
- Browning GF, Chalmers RM, Fitzgerald TA, Corley KT, Campbell I, Snodgrass DR. Rotavirus serotype G3 predominates in horses.. J Clin Microbiol 1992 Jan;30(1):59-62.
- Brüssow H, Nakagomi O, Gerna G, Eichhorn W. Isolation of an avianlike group A rotavirus from a calf with diarrhea.. J Clin Microbiol 1992 Jan;30(1):67-73.
- Browning GF, Chalmers RM, Snodgrass DR, Batt RM, Hart CA, Ormarod SE, Leadon D, Stoneham SJ, Rossdale PD. The prevalence of enteric pathogens in diarrhoeic thoroughbred foals in Britain and Ireland.. Equine Vet J 1991 Nov;23(6):405-9.
- Imagawa H, Sekiguchi K, Anzai T, Fukunaga Y, Kanemaru T, Ohishi H, Higuchi T, Kamada M. Epidemiology of equine rotavirus infection among foals in the breeding region.. J Vet Med Sci 1991 Dec;53(6):1079-80.
- Browning GF, Chalmers RM, Fitzgerald TA, Snodgrass DR. Evidence for two serotype G3 subtypes among equine rotaviruses.. J Clin Microbiol 1992 Feb;30(2):485-91.
- Imagawa H, Tanaka T, Sekiguchi K, Fukunaga Y, Anzai T, Minamoto N, Kamada M. Electropherotypes, serotypes, and subgroups of equine rotaviruses isolated in Japan.. Arch Virol 1993;131(1-2):169-76.
- Hoshino Y, Wyatt RG, Greenberg HB, Kalica AR, Flores J, Kapikian AZ. Isolation, propagation, and characterization of a second equine rotavirus serotype.. Infect Immun 1983 Sep;41(3):1031-7.
Citations
This article has been cited 8 times.- Pathak A, Gulati BR, Maan S, Mor S, Kumar D, Soman R, Punia S, Chaudhary D, Khurana SK. Complete Genome Sequencing Reveals Unusual Equine Rotavirus A of Bat Origin from India.. J Virol 2022 Oct 26;96(20):e0140822.
- Uprety T, Sreenivasan CC, Hause BM, Li G, Odemuyiwa SO, Locke S, Morgan J, Zeng L, Gilsenan WF, Slovis N, Metcalfe L, Carter CN, Timoney P, Horohov D, Wang D, Erol E, Adam E, Li F. Identification of a Ruminant Origin Group B Rotavirus Associated with Diarrhea Outbreaks in Foals.. Viruses 2021 Jul 9;13(7).
- Nemoto M, Matsumura T. Equine rotavirus infection.. J Equine Sci 2021 Mar;32(1):1-9.
- Bailey KE, Gilkerson JR, Browning GF. Equine rotaviruses--current understanding and continuing challenges.. Vet Microbiol 2013 Nov 29;167(1-2):135-44.
- Collins PJ, Cullinane A, Martella V, O'Shea H. Molecular characterization of equine rotavirus in Ireland.. J Clin Microbiol 2008 Oct;46(10):3346-54.
- Dhama K, Chauhan RS, Mahendran M, Malik SV. Rotavirus diarrhea in bovines and other domestic animals.. Vet Res Commun 2009 Jan;33(1):1-23.
- Gulati BR, Deepa R, Singh BK, Rao CD. Diversity in Indian equine rotaviruses: identification of genotype G10,P6[1] and G1 strains and a new VP7 genotype (G16) strain in specimens from diarrheic foals in India.. J Clin Microbiol 2007 Mar;45(3):972-8.
- Isa P, Wood AR, Netherwood T, Ciarlet M, Imagawa H, Snodgrass DR. Survey of equine rotaviruses shows conservation of one P genotype in background of two G genotypes.. Arch Virol 1996;141(9):1601-12.
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