Abstract: Equine melanocytic neoplasms (EMN) are aggressive tumours characterised by high metastatic potential and limited therapeutic options available. However, the molecular mechanisms underlying their progression remain poorly understood. This study therefore presents the integrative phosphoproteomic analysis of EMN tissue, with the aim of elucidating stage-specific alterations in signalling pathways and metabolism. Nineteen tissue samples from grey horses were categorised as normal-stage (n = 6), early-stage EMN (n = 7), and severe-stage EMN (n = 6) and subjected to in-depth analysis using liquid chromatography-tandem mass spectrometry (LC-MS/MS). A total of 2035 phosphoproteins were identified, of which 219 were differentially expressed across the disease stages. Interestingly, early-stage EMN showed dysregulation of inositol phosphate metabolism and activation of the PI3K-Akt pathway which involved INPP5F and PKN2. In severe-stage EMN, upregulation of SYNJ1, STRN4 and VIM indicated enhanced membrane trafficking, cytoskeletal remodelling, and MAPK signalling. Additionally, ASPM and GNAO1 upregulation reflected heightened proliferation and altered Rap1 signalling, while UBR5 dysregulation suggested aberrant protein homeostasis. Metabolic reprogramming was also noticed, with elevated TKT and GAPDH expression supporting glycolysis and NADPH production. Observably, the severe-stage EMN exhibited a higher expression of Dickkopf-3 (DKK3) which suggests a role in aberrant Wnt/β-catenin activation and tumour progression. These findings reveal stage-specific molecular mechanisms in EMN pathogenesis and highlight potential biomarkers and therapeutic targets for equine melanoma.
The Equine Research Bank provides access to a large database of publicly available scientific literature. Inclusion in the Research Bank does not imply endorsement of study methods or findings by Mad Barn.
This research summary has been generated with artificial intelligence and may contain errors and omissions. Refer to the original study to confirm details provided. Submit correction.
Overview
This study investigates the molecular changes that occur at different stages of equine melanocytic neoplasm (EMN), an aggressive horse tumor, by analyzing protein phosphorylation patterns.
The research identifies specific signaling pathways and metabolic processes that are altered as the disease progresses, providing insight into potential biomarkers and therapeutic targets.
Background and Significance
Equine melanocytic neoplasms (EMN) are aggressive skin tumors found primarily in grey horses.
These tumors have a high tendency to metastasize and limited treatment options, making understanding their molecular basis critical.
Despite their clinical impact, the detailed molecular mechanisms driving EMN progression remain largely unknown.
Phosphoproteomics, which studies protein phosphorylation (a key regulatory modification), can reveal active signaling pathways and metabolic alterations relevant to tumor development.
Methodology
Tissue samples were collected from grey horses and classified into three categories based on disease severity:
Normal-stage (healthy tissue, n=6)
Early-stage EMN (tumor initiation, n=7)
Severe-stage EMN (advanced tumor, n=6)
Samples underwent liquid chromatography-tandem mass spectrometry (LC-MS/MS), a high-sensitivity technique to detect and quantify phosphorylated proteins.
A total of 2035 phosphoproteins were identified across all samples.
Alterations were observed in inositol phosphate metabolism, a pathway involved in cellular signaling and membrane dynamics.
Activation of the PI3K-Akt signaling pathway was detected, which is known to regulate cell growth, survival, and metabolism.
Phosphoproteins INPP5F and PKN2 were implicated in this activation.
These changes suggest early EMN favors signaling that promotes cell proliferation and survival.
Key Findings: Severe-Stage EMN
Upregulation of SYNJ1, STRN4, and VIM indicated enhanced:
Membrane trafficking, important for vesicle movement and signaling.
Cytoskeletal remodeling, which can facilitate cell motility and invasion.
MAPK signaling pathway activation, a key route regulating proliferation and stress responses.
Increased levels of ASPM and GNAO1 suggested:
Heightened cellular proliferation.
Altered Rap1 signaling, involved in cell adhesion and movement.
Dysregulation of UBR5, a protein involved in protein degradation and homeostasis, suggested disruptions in cellular protein quality control.
Metabolic reprogramming was noted:
Elevated TKT (transketolase) and GAPDH (glyceraldehyde 3-phosphate dehydrogenase) indicated increased glycolysis and NADPH production, supporting tumor growth and antioxidant defenses.
Notably, Dickkopf-3 (DKK3) showed higher expression, implicating aberrant activation of Wnt/β-catenin signaling, a pathway well-known for its role in cancer progression and metastasis.
Implications and Conclusions
The study demonstrates that EMN progression involves distinct stage-specific signaling and metabolic changes.
Early-stage EMN is characterized by activation of survival and growth pathways (PI3K-Akt), while severe-stage involves enhanced cell motility, altered protein homeostasis, and metabolic remodeling.
Wnt/β-catenin pathway activation via DKK3 in late-stage EMN suggests a potential target for therapeutic intervention.
The identified phosphoproteins offer potential biomarkers for disease staging and progression monitoring.
These molecular insights provide a foundation for developing novel treatments targeting the specific pathways dysregulated in EMN.
Cite This Article
APA
Srimontri P, Kingkaw A, Prapaiwan N, Sujittosakul R, Iamkaewprasert N, Piputwat J, Isama-Al P, Munkongdee T, Chotikaprakal T, Yanyongsirikarn P, Phaonakrop N, Roytrakul S, Vongsangnak W, Tesena P.
(2026).
Integrative Phosphoproteomic Profiling Reveals Stage-Specific Signalling and Metabolism in Equine Melanocytic Neoplasm.
Vet Comp Oncol.
https://doi.org/10.1111/vco.70070
Department of Clinical Science and Public Health, Faculty of Veterinary Science, Mahidol University, Nakhon Pathom, Thailand.
Kingkaw, Amornthep
Kasetsart University International College (KUIC), Kasetsart University, Bangkok, Thailand.
Prapaiwan, Nawarus
Department of Clinical Science and Public Health, Faculty of Veterinary Science, Mahidol University, Nakhon Pathom, Thailand.
Sujittosakul, Rangsima
Department of Clinical Science and Public Health, Faculty of Veterinary Science, Mahidol University, Nakhon Pathom, Thailand.
Iamkaewprasert, Nichapat
Faculty of Veterinary Science, Mahidol University, Nakhon Pathom, Thailand.
Piputwat, Jiraschaya
Faculty of Veterinary Science, Mahidol University, Nakhon Pathom, Thailand.
Isama-Al, Puetta
Faculty of Veterinary Science, Mahidol University, Nakhon Pathom, Thailand.
Munkongdee, Thanutchanok
Faculty of Veterinary Science, Mahidol University, Nakhon Pathom, Thailand.
Chotikaprakal, Thanapon
Biochemistry Unit, Department of Physiology, Faculty of Veterinary Science, Chulalongkorn University, Bangkok, Thailand.
Yanyongsirikarn, Petchpailin
Equine Clinic, Prasuarthon Small Animal Hospital, Faculty of Veterinary Science, Mahidol University, Nakhon Pathom, Thailand.
Phaonakrop, Narumon
Functional Proteomics Technology Laboratory, National Center for Genetic Engineering and Biotechnology, National Science and Technology Development Agency, Pathum Thani, Thailand.
Roytrakul, Sittiruk
Functional Proteomics Technology Laboratory, National Center for Genetic Engineering and Biotechnology, National Science and Technology Development Agency, Pathum Thani, Thailand.
Vongsangnak, Wanwipa
Department of Zoology, Faculty of Science, Kasetsart University, Bangkok, Thailand.
Omics Center for Agriculture, Bioresources, Food, and Health, Kasetsart University (OmiKU), Bangkok, Thailand.
Tesena, Parichart
Department of Clinical Science and Public Health, Faculty of Veterinary Science, Mahidol University, Nakhon Pathom, Thailand.
Grant Funding
MU-SRF-RS-14A/66 / Mahidol University's Strategic Research Fund: 2023
Faculty of Veterinary Science, Mahidol University.
Phillips JC, Lembcke LM. Equine Melanocytic Tumors. Veterinary Clinics of North America. Equine Practice 29, no. 3 (2013): 673–687.
Mala A, Kopecka A, Jahn P, Linhart P, Frgelecova L, Skoric M. Prevalence and Histopathological Classification of Equine Melanocytic Tumours in The Czech Republic and Slovakia. Acta Veterinaria Brno 93, no. 3 (2024): 269–274.
Brodesser DM, Kummer S, Eichberger JA. Deregulation of Metalloproteinase Expression in Gray Horse Melanoma Ex Vivo and In Vitro. Cells 13, no. 11 (2024): 956.
Desser H, Niebauer GW, Gebhart W. Polyamine and Histamine Contents in the Blood of Pigmented, Depigmented and Melanoma Bearing Lipizzaner Horses. Zentralblatt für Veterinärmedizin. Reihe A 27, no. 1 (1980): 45–53.
Lowry OH, Rosebrough NJ, Farr AL, Randall RJ. Protein Measurement With the Folin Phenol Reagent. Journal of Biological Chemistry 193, no. 1 (1951): 265–275.
Tyanova S, Temu T, Cox J. The MaxQuant Computational Platform for Mass Spectrometry‐Based Shotgun Proteomics. Nature Protocols 11, no. 12 (2016): 2301–2319.
UniProt C. UniProt: The Universal Protein Knowledgebase in 2023. Nucleic Acids Research 51, no. D1 (2023): D523–D531.
Benjamini Y, Hochberg Y. Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing. Journal of the Royal Statistical Society. Series B, Statistical Methodology 57, no. 1 (1995): 289–300.
Kanehisa M, Goto S, Kawashima S, Okuno Y, Hattori M. The KEGG Resource for Deciphering the Genome. Nucleic Acids Research 32, no. Database Issue (2004): D277–D280.
Kuhn M, von Mering C, Campillos M, Jensen LJ, Bork P. STITCH: Interaction Networks of Chemicals and Proteins. Nucleic Acids Research 36, no. Database Issue (2008): D684–D688.
Rieder S, Stricker C, Joerg H, Dummer R, Stranzinger G. A Comparative Genetic Approach for the Investigation of Ageing Grey Horse Melanoma. Journal of Animal Breeding and Genetics 117, no. 2 (2000): 73–82.
Moore JS, Shaw C, Shaw E. Melanoma in Horses: Current Perspectives. Equine Veterinary Education 25, no. 3 (2013): 144–151.
Gerritsen JS, White FM. Phosphoproteomics: A Valuable Tool for Uncovering Molecular Signaling in Cancer Cells. Expert Review of Proteomics 18, no. 8 (2021): 661–674.
Zhu W, Trivedi CM, Zhou D, Yuan L, Lu MM, Epstein JA. Inpp5f Is a Polyphosphoinositide Phosphatase That Regulates Cardiac Hypertrophic Responsiveness. Circulation Research 105, no. 12 (2009): 1240–1247.
Kim HS, Li A, Ahn S, Song H, Zhang W. Inositol Polyphosphate‐5‐Phosphatase F (INPP5F) Inhibits STAT3 Activity and Suppresses Gliomas Tumorigenicity. Scientific Reports 4 (2014): 7330.
Luo W, Li S, Peng B, Ye Y, Deng X, Yao K. Embryonic Stem Cells Markers SOX2, OCT4 and Nanog Expression and Their Correlations With Epithelial‐Mesenchymal Transition in Nasopharyngeal Carcinoma. PLoS One 8, no. 2 (2013): e56324.
Zou Z, Chen J, Yang J, Bai X. Targeted Inhibition of Rictor/mTORC2 in Cancer Treatment: A New Era After Rapamycin. Current Cancer Drug Targets 16, no. 4 (2016): 288–304.
Glaviano A, Foo ASC, Lam HY. PI3K/AKT/mTOR Signaling Transduction Pathway and Targeted Therapies in Cancer. Molecular Cancer 22, no. 1 (2023): 138.
Lee SJ, Hwang J, Jeong HJ. PKN2 and Cdo Interact to Activate AKT and Promote Myoblast Differentiation. Cell Death & Disease 7, no. 10 (2016): e2431.
Gureev AP, Popov VN, Starkov AA. Crosstalk Between the mTOR and Nrf2/ARE Signaling Pathways as a Target in the Improvement of Long‐Term Potentiation. Experimental Neurology 328 (2020): 113285.
Killarney ST, Mesa G, Washart R. PKN2 Is a Dependency of the Mesenchymal‐Like Cancer Cell State. Cancer Discovery 15, no. 3 (2025): 595–615.
Chen H, Yue JX, Yang SH, Ding H, Zhao RW, Zhang S. Overexpression of Transketolase‐Like Gene 1 Is Associated With Cell Proliferation in Uterine Cervix Cancer. Journal of Experimental & Clinical Cancer Research 28, no. 1 (2009): 43.
Jayachandran A, Lo PH, Chueh AC. Transketolase‐Like 1 Ectopic Expression Is Associated With DNA Hypomethylation and Induces the Warburg Effect in Melanoma Cells. BMC Cancer 16 (2016): 134.
Gu XY, Zhou ZJ, Yao H. The Role of Transketolase in the Immunotherapy and Prognosis of Hepatocellular Carcinoma: A Multi‐Omics Approach. Frontiers in Immunology 16 (2025): 1529029.
Chao YK, Peng TL, Chuang WY. Transketolase Serves a Poor Prognosticator in Esophageal Cancer by Promoting Cell Invasion via Epithelial‐Mesenchymal Transition. Journal of Cancer 7, no. 13 (2016): 1804–1811.
Ramos AR, Ghosh S, Erneux C. The Impact of Phosphoinositide 5‐Phosphatases on Phosphoinositides in Cell Function and Human Disease. Journal of Lipid Research 60, no. 2 (2019): 276–286.
Colell A, Green DR, Ricci JE. Novel Roles for GAPDH in Cell Death and Carcinogenesis. Cell Death and Differentiation 16, no. 12 (2009): 1573–1581.
Koch A, Ebert EV, Seitz T. Characterization of Glycolysis‐Related Gene Expression in Malignant Melanoma. Pathology, Research and Practice 216, no. 1 (2020): 152752.
Zhu X, Jin C, Pan Q, Hu X. Determining the Quantitative Relationship Between Glycolysis and GAPDH in Cancer Cells Exhibiting the Warburg Effect. Journal of Biological Chemistry 296 (2021): 100369.
Kosova AA, Khodyreva SN, Lavrik OI. Role of Glyceraldehyde‐3‐Phosphate Dehydrogenase (GAPDH) in DNA Repair. Biochemistry (Mosc) 82, no. 6 (2017): 643–654.
Tecalco‐Cruz AC, Rios‐Lopez DG, Vazquez‐Victorio G, Rosales‐Alvarez RE, Macias‐Silva M. Transcriptional Cofactors Ski and SnoN Are Major Regulators of the TGF‐Beta/Smad Signaling Pathway in Health and Disease. Signal Transduction and Targeted Therapy 3 (2018): 15.
Reed JA, Lin Q, Chen D, Mian IS, Medrano EE. SKI Pathways Inducing Progression of Human Melanoma. Cancer Metastasis Reviews 24, no. 2 (2005): 265–272.
Liao HY, Da CM, Wu ZL, Zhang HH. Ski: Double Roles in Cancers. Clinical Biochemistry 87 (2021): 1–12.
Li AX, Martin TA, Lane J, Jiang WG. Cellular Impacts of Striatins and the STRIPAK Complex and Their Roles in the Development and Metastasis in Clinical Cancers (Review). Cancers (Basel) 16, no. 1 (2023): 1–28.
Zhang Y, Gu X, Jiang F, Sun P, Li X. Altered Expression of Striatin‐4 Is Associated With Poor Prognosis in Bladder Transitional Cell Carcinoma. Oncology Letters 21, no. 4 (2021): 331.
Du QY, Yao JH, Zhou YC, Xu LJ, Zhao FY, Yang Y. High STRN Expression Promotes HCC Invasion and Migration but Not Cell Proliferation or Apoptosis Through Facilitating Epithelial‐Mesenchymal Transition. BioMed Research International 2020 (2020): 6152925.
Ferrari N, Ranftl R, Chicherova I. Dickkopf‐3 Links HSF1 and YAP/TAZ Signalling to Control Aggressive Behaviours in Cancer‐Associated Fibroblasts. Nature Communications 10, no. 1 (2019): 130.
Mourtada JM, Thibaudeau C, Wasylyk B, Jung AC. The Multifaceted Role of Human Dickkopf‐3 (DKK‐3) in Development, Immune Modulation and Cancer. Cells 13, no. 1 (2023): 75.
Miller L, Heider A, Shao L. A Novel GLCC1: BRAF Fusion With Independent MYCN and MYC Amplifications in Primary Tumor and Metastasis in Pediatric Pancreatic Acinar Carcinoma. American Journal of Clinical Pathology 160 (2023): S99.
Wang F, Zhang D, Zhang D, Li P, Gao Y. Mitochondrial Protein Translation: Emerging Roles and Clinical Significance in Disease. Frontiers in Cell and Development Biology 9 (2021): 675465.
Kumar PR, Moore JA, Bowles KM, Rushworth SA, Moncrieff MD. Mitochondrial Oxidative Phosphorylation in Cutaneous Melanoma. British Journal of Cancer 124, no. 1 (2021): 115–123.
Avagliano A, Fiume G, Pelagalli A. Metabolic Plasticity of Melanoma Cells and Their Crosstalk With Tumor Microenvironment. Frontiers in Oncology 10 (2020): 722.
Ferraz LS, Costa RTD, Costa CAD. Targeting Mitochondria in Melanoma: Interplay Between MAPK Signaling Pathway and Mitochondrial Dynamics. Biochemical Pharmacology 178 (2020): 114104.
Usman S, Waseem NH, Nguyen TKN. Vimentin Is at the Heart of Epithelial Mesenchymal Transition (EMT) Mediated Metastasis. Cancers (Basel) 13, no. 19 (2021): 4985.
Gui P, Han Z, Yin Z, Cao P, Zhou X, Li Y. Assembly Factor for Spindle Microtubules (ASPM) Promotes Osimertinib Resistance in Lung Cancer by Increasing EGFR Stability. Frontiers in Genetics 16 (2025): 1593314.
Tsai KK, Bae BI, Hsu CC, Cheng LH, Shaked Y. Oncogenic ASPM Is a Regulatory Hub of Developmental and Stemness Signaling in Cancers. Cancer Research 83, no. 18 (2023): 2993–3000.
Briere L, Thiel M, Sweetser DA, Koy A, Axeen E. GNAO1‐Related Disorder. GeneReviews((R)) 1993.
Yip HYK, Papa A. Signaling Pathways in Cancer: Therapeutic Targets, Combinatorial Treatments, and New Developments. Cells 10, no. 3 (2021): 659.
Julg J, Edbauer D, Behrends C. C9orf72 Protein Quality Control by UBR5‐Mediated Heterotypic Ubiquitin Chains. EMBO Reports 24, no. 8 (2023): e55895.
Odhiambo DA, Fan S, Hirbe AC. UBR5 in Tumor Biology: Exploring Mechanisms of Immune Regulation and Possible Therapeutic Implications in MPNST. Cancers (Basel) 17, no. 2 (2025): 161.
Mohamud Y, Bahreyni A, Hwang SW. Mitochondrial Injury and Complement Dysregulation Are Drivers of Pathological Inflammation in Viral Myocarditis. Journal of Virology 99, no. 2 (2025): e0180424.
Cohen E, Johnson CN, Wasikowski R. Significance of Stress Keratin Expression in Normal and Diseased Epithelia. IScience 27, no. 2 (2024): 108805.
Granados K, Poelchen J, Novak D, Utikal J. Cellular Reprogramming: A Model for Melanoma Cellular Plasticity. International Journal of Molecular Sciences 21, no. 21 (2020): 8274.