Multiplex Detection of Transgenes Using πCode Technology for Gene Doping Control.
Abstract: To ensure fair competition and sports integrity, gene doping is prohibited in horseracing and equine sports. One gene doping method is by administering exogenous genes, called transgenes, to postnatal animals. Although several transgene detection methods have been developed for horses, many are unsuitable for multiplex detection. In this proof-of-concept study, we developed a highly sensitive and multiplex transgene detection method using multiple πCode with identification patterns printed on the surface. The following steps were employed: (1) multiplex polymerase chain reaction amplification of 12 targeted transgenes in a single tube, (2) detection using a mixture of 12 probes labeled with different πCodes, and (3) median fluorescence intensity measurement of fluorescent πCodes. Twelve transgenes cloned into plasmid vectors were targeted, and 1500 copies of each plasmid were spiked into 1.5 mL of horse plasma. Subsequently, a novel method using πCode succeeded in detecting all the transgenes using their DNA extracts. Additionally, we detected the erythropoietin () transgene in blood samples from a horse administered solely with the transgene using this method. Therefore, the πCode detection method is considered suitable for multitarget gene detection in gene doping tests.
Publication Date: 2023-06-28 PubMed ID: 37379520DOI: 10.1021/acs.analchem.3c00988Google Scholar: Lookup
The Equine Research Bank provides access to a large database of publicly available scientific literature. Inclusion in the Research Bank does not imply endorsement of study methods or findings by Mad Barn.
- Journal Article
- Research Support
- Non-U.S. Gov't
Summary
This research summary has been generated with artificial intelligence and may contain errors and omissions. Refer to the original study to confirm details provided. Submit correction.
The researchers have developed a proof-of-concept method to detect multiple transgenes, or outside genes injected into an organism, typically associated with gene doping in horse sports. They used a technology called πCode and applied it in the form of fluorescent-coded probes to identify these genes.
Objective of the Research
- The primary aim of the study was the development of a new, highly sensitive method to detect multiple instances of transgene doping in horse sports.
- The researchers aimed to fill the void in existing gene doping detection strategies, as many are not suitable for detecting multiple transgenes.
Methodology of the Study
- The researchers used a sequence of steps involving multiplex polymerase chain reaction (polymerase chain reaction designed for simultaneously examining multiple loci), the development and application of probes labeled with different πCodes, and a median fluorescence intensity measurement of fluorescent πCodes.
- For the proof-of-concept experiment, 12 specific transgenes, which had been cloned into plasmid vectors, were targeted. These plasmids were introduced into horse plasma samples.
- The usage of πCode technology, which prints identification patterns on a particle’s surface, allowed for the detection of all injected transgenes.
Findings of the Study
- The experiment was successful as the πCode technology could identify all the targeted transgenes.
- A notable test case was the ability to detect the erythropoietin (EPO) transgene in blood samples from a horse administered solely with the EPO transgene. This highlights the method’s effectiveness in real-world applications.
- Based on these findings, the researchers concluded that their new πCode detection method is poised to be a substantial upgrade over current detection methods, specifically for multitarget gene detection in gene doping tests.
Cite This Article
APA
Ohnuma A, Tozaki T, Kikuchi M, Ishige T, Kakoi H, Hirota KI, Takahashi Y, Nagata SI.
(2023).
Multiplex Detection of Transgenes Using πCode Technology for Gene Doping Control.
Anal Chem, 95(27), 10149-10154.
https://doi.org/10.1021/acs.analchem.3c00988 Publication
Researcher Affiliations
- Genetic Analysis Department, Laboratory of Racing Chemistry, 1731-2 Tsurutamachi, Utsunomiya, Tochigi 320-0851, Japan.
- Genetic Analysis Department, Laboratory of Racing Chemistry, 1731-2 Tsurutamachi, Utsunomiya, Tochigi 320-0851, Japan.
- Genetic Analysis Department, Laboratory of Racing Chemistry, 1731-2 Tsurutamachi, Utsunomiya, Tochigi 320-0851, Japan.
- Genetic Analysis Department, Laboratory of Racing Chemistry, 1731-2 Tsurutamachi, Utsunomiya, Tochigi 320-0851, Japan.
- Genetic Analysis Department, Laboratory of Racing Chemistry, 1731-2 Tsurutamachi, Utsunomiya, Tochigi 320-0851, Japan.
- Genetic Analysis Department, Laboratory of Racing Chemistry, 1731-2 Tsurutamachi, Utsunomiya, Tochigi 320-0851, Japan.
- Equine Research Institute, Japan Racing Association, 1400-4 Shiba, Shimotsuke, Tochigi 329-0412, Japan.
- Genetic Analysis Department, Laboratory of Racing Chemistry, 1731-2 Tsurutamachi, Utsunomiya, Tochigi 320-0851, Japan.
MeSH Terms
- Animals
- Horses / genetics
- Doping in Sports
- Transgenes
- Plasmids
- Genetic Vectors
- Multiplex Polymerase Chain Reaction
Citations
This article has been cited 6 times.- Wu D, Ding S, Liu N, Shi Y, Su P, Shi H, Shi Y, Han B, Cheng S, Ren X, Tian F, Chen P, Wu J, Su X, Li R. Codon changes challenge PCR-based gene doping detection. Gene Ther 2025 Dec;32(6):632-640.
- Maehara K, Hirokawa A, Watanabe H, Otani N, Wan J, Shirai T, Takemasa T, Watanabe K, Nishi T, Sato K, Shimmura S, Nguyen KDM, Takahashi Y, Sugasawa T. Development of Detection Method Using Dried Blood Spot with Next-Generation Sequencing and LabDroid for Gene Doping Control. Int J Mol Sci 2025 Jun 26;26(13).
- Zhao J, Wang Y, Liu B. Doping Detection Based on the Nanoscale: Biosensing Mechanisms and Applications of Two-Dimensional Materials. Biosensors (Basel) 2025 Apr 3;15(4).
- Thomas A, Walpurgis K, Naumann N, Piper T, Thevis M. Bioanalytical methods in doping controls: a review. Bioanalysis 2025 Mar;17(5):359-370.
- Puchalska M, Witkowska-Piłaszewicz O. Gene doping in horse racing and equine sports: Current landscape and future perspectives. Equine Vet J 2025 Mar;57(2):312-324.
- Maniego J, Harding C, Habershon-Butcher J, Hincks P, Ryder E. Administration and detection of a multi-target rAAV gene doping vector in horses using multiple matrices and molecular techniques. Gene Ther 2024 Sep;31(9-10):477-488.
Use Nutrition Calculator
Check if your horse's diet meets their nutrition requirements with our easy-to-use tool Check your horse's diet with our easy-to-use tool
Talk to a Nutritionist
Discuss your horse's feeding plan with our experts over a free phone consultation Discuss your horse's diet over a phone consultation
Submit Diet Evaluation
Get a customized feeding plan for your horse formulated by our equine nutritionists Get a custom feeding plan formulated by our nutritionists