Quantitative analysis of short- and long-distance racing performance in young and adult horses and association analysis with functional candidate genes in Spanish Trotter horses.
Abstract: The association of five candidate genes with sporting performance in young and adult Spanish Trotter horses (STHs) was performed according to a previous selection based on quantitative analysis of the trait time per kilometre (TPK). A total of 334 516 records of TPK from 5958 STHs were used to estimate the estimated breeding values (EBVs) at different age groups (young and adults horses) throughout the range of distances (1600-2700 m) using a bicharacter random regression model. The heritability estimated by distance ranged from 0.16 to 0.40, with a different range for the two age groups. Considering the animals with the best and the worst deregressed EBV, 321 STHs were selected for SNP genotyping in MSTN, COX4I2, PDK4, DMRT3 and CKM genes. An association analysis based on ridge and logistic regression revealed that the young trotters with genotype GG in PDK4 (p < 0.05) and AA of DMRT3 (p < 0.001) SNPs show the best potential in short-distance races, while those carrying the genotype AA in DMRT3 (p < 0.001) and CC in CKM (p < 0.05) genes seem to be the best in long-distance races. Adult trotters with genotype AA in DMRT3 also display greater speed (p < 0.05) and endurance (p < 0.001).
© 2016 Blackwell Verlag GmbH.
Publication Date: 2016-03-16 PubMed ID: 26991374DOI: 10.1111/jbg.12208Google Scholar: Lookup
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- Journal Article
Summary
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This research focused on studying the influence of certain genes on short- and long-distance racing performance in young and adult Spanish Trotter horses. The results revealed significant associations of particular genotypes with racing performance, suggesting genetic factors play a key role in horse athleticism.
Research Methodology
- The researchers chose five genes (MSTN, COX4I2, PDK4, DMRT3, and CKM) to investigate based on their suspected relevance to time per kilometre (TPK) trait seen in Spanish Trotter horses (STHs).
- They analysed 334,516 records of TPK from 5,958 STHs and used these to estimate the estimated breeding values (EBVs) at different age groups (young and adult horses) across a range of distances (1,600-2,700 m).
- This estimation was performed using a random regression model, a statistical tool that allows the fit of a model that can change over time or distance.
- The study stratified the horses into different groups according to age (young and adults) and racing distance (short and long), considering the highest and lowest deregressed EBVs.
- A group of 321 STHs was selected from these strata for SNP genotyping of the target genes.
Results of the Study
- The heritability factor across the different distances ranged from 0.16 to 0.4, indicating a moderate level of genetic influence on racing performance in trotter horses.
- Investigation of the SNP genotyping revealed that young trotters with the GG genotype in the PDK4 gene and the AA genotype in the DMRT3 gene performed best in short-distance races.
- Horses with the AA genotype in the DMRT3 gene and CC genotype in the CKM gene were the best performers in long-distance races.
- Adult trotters with the AA genotype in the DMRT3 gene exhibited better speed and endurance.
Conclusion of the Study
- The researchers concluded that specific genotype patterns in various genes are associated with racing performance in Spanish Trotter horses.
- Notably, the genes PDK4 and DMRT3 were linked with short distance running performance, while genes DMRT3 and CKM were associated with long distance performance.
- The findings underscore the significant contribution of genetics in the sporting performance of horses, potentially guiding future breeding and training strategies.
Cite This Article
APA
Negro Rama S, Valera M, Membrillo A, Gómez MD, Solé M, Menendez-Buxadera A, Anaya G, Molina A.
(2016).
Quantitative analysis of short- and long-distance racing performance in young and adult horses and association analysis with functional candidate genes in Spanish Trotter horses.
J Anim Breed Genet, 133(5), 347-356.
https://doi.org/10.1111/jbg.12208 Publication
Researcher Affiliations
- Department of Agroforestry Sciences, ETSIA, University of Seville, Seville, Spain. z12neras@uco.es.
- Department of Agroforestry Sciences, ETSIA, University of Seville, Seville, Spain.
- Department of Genetics, University of Cordoba, Cordoba, Spain.
- Department of Agroforestry Sciences, ETSIA, University of Seville, Seville, Spain.
- Department of Agroforestry Sciences, ETSIA, University of Seville, Seville, Spain.
- Department of Genetics, University of Cordoba, Cordoba, Spain.
- Department of Genetics, University of Cordoba, Cordoba, Spain.
- Department of Genetics, University of Cordoba, Cordoba, Spain.
MeSH Terms
- Animals
- Breeding
- Female
- Genetic Association Studies
- Horses / classification
- Horses / genetics
- Horses / physiology
- Male
- Physical Conditioning, Animal
- Polymorphism, Single Nucleotide
Citations
This article has been cited 4 times.- Vincelette A. The Characteristics, Distribution, Function, and Origin of Alternative Lateral Horse Gaits.. Animals (Basel) 2023 Aug 8;13(16).
- Ablondi M, Johnsson M, Eriksson S, Sabbioni A, Viklund ÅG, Mikko S. Performance of Swedish Warmblood fragile foal syndrome carriers and breeding prospects.. Genet Sel Evol 2022 Jan 21;54(1):4.
- Ricard A, Duluard A. Genomic analysis of gaits and racing performance of the French trotter.. J Anim Breed Genet 2021 Mar;138(2):204-222.
- Velie BD, Fegraeus KJ, Solé M, Rosengren MK, Røed KH, Ihler CF, Strand E, Lindgren G. A genome-wide association study for harness racing success in the Norwegian-Swedish coldblooded trotter reveals genes for learning and energy metabolism.. BMC Genet 2018 Aug 29;19(1):80.
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