Sequence analysis and expression profiling of the equine ACTN3 gene during exercise in Arabian horses.
Abstract: The ACTN3 gene codes for α-actinin-3, a protein localized in the Z-line in the skeletal muscle. Actinin-3 is critical in anchoring the myofibrillar actin filaments and plays a key role in muscle contraction. ACTN3 (α-actinin-3) cross-links glycogen phosphorylase (GP), which is the key enzyme catalysing glycogen metabolism. The aim of present study was to establish the expression level of the ACTN3 gene (for both isoforms separately and together in the gene expression analysis) in the gluteus medius muscle in order to verify if the α-actinin-3 gene can be related to training intensity in Arabian horses. A structural analysis of the ACTN3 gene was performed simultaneously to identify polymorphisms that can be related to racing performance traits. Our results showed the significant decrease (p T - splice variant and the g.1104G>A polymorphism in the promoter region, were proposed as the causative mutations that might affect gene expression. The presented gene expression analyses indicated the significant role of the ACTN3 gene in adaptation to physiological effort in horses. Due to previous reports and our findings, further studies should be conducted to verify the usage of the ACTN3 gene as a potential genetic marker for determining exercise performance in Arabian horses and other horse breeds.
Copyright © 2018 Elsevier B.V. All rights reserved.
Publication Date: 2018-10-30 PubMed ID: 30389559DOI: 10.1016/j.gene.2018.10.079Google Scholar: Lookup
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Summary
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The research investigates the functionality and expression levels of the ACTN3 gene in Arabian horses, which is associated with muscle contraction and the metabolic process during exercise. High levels of this gene were found in untrained horses, while low expression levels were found in horses fully adapted to racing. Through structural analysis, 14 polymorphisms were identified, two of which may affect gene expression.
About the ACTN3 gene
- The ACTN3 gene is responsible for producing α-actinin-3, a protein that resides in the skeletal muscle of the body.
- This protein plays a crucial role in facilitating muscle contraction, by anchoring the myofibrillar actin filaments.
- The α-actinin-3 also engages in metabolism by cross-linking glycogen phosphorylase (GP), an enzyme essential for glycogen metabolism.
The Study
- The central aim of this research was to determine the expression levels of the ACTN3 gene in the gluteus medius muscle of Arabian horses and correlate it with their training intensity.
- In addition to the expression analysis, the researchers also did a structural analysis of the gene to detect any polymorphisms that may contribute to racing performance.
- The research found a significant decrease in the expression of ACTN3 in the skeletal muscle during the training periods for flat-racing, with expression varying based on the intensity of exercise.
- The highest gene expression was found in untrained horses, while the lowest, was identified at the end of the racing season, where the horses are fully adapted to the racing workload.
ACTN3 Gene Polymorphisms
- In their investigation of the ACTN3 structure, the team discovered 14 polymorphisms. These were found in various areas: the promoter region, the 5’UTR, exons, and introns.
- Two polymorphisms in particular (a novel c.2334C>T – splice variant and the g.1104G>A polymorphism in the promoter region) are believed to potentially affect gene expression.
Conclusions and Future Directions
- The study establishes the crucial role of the ACTN3 gene in Arabian horses’ physiological adaptation to exertion.
- Given the significance of its role and known variable expression, further studies are suggested to verify the ACTN3 gene’s potential as a genetic marker to determine exercise performance in not just Arabian horses, but other horse breeds as well.
Cite This Article
APA
Ropka-Molik K, Stefaniuk-Szmukier M, Musiał AD, Piórkowska K, Szmatoła T.
(2018).
Sequence analysis and expression profiling of the equine ACTN3 gene during exercise in Arabian horses.
Gene, 685, 149-155.
https://doi.org/10.1016/j.gene.2018.10.079 Publication
Researcher Affiliations
- Department of Animal Molecular Biology, National Research Institute of Animal Production, Poland. Electronic address: katarzyna.ropka@izoo.krakow.pl.
- Department of Horse Breeding, Institute of Animal Science, the University of Agriculture in Krakow, Poland.
- Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, Poland.
- Department of Animal Molecular Biology, National Research Institute of Animal Production, Poland.
- Department of Animal Molecular Biology, National Research Institute of Animal Production, Poland.
MeSH Terms
- Actinin / genetics
- Animals
- Gene Expression Profiling
- Horses / genetics
- Linkage Disequilibrium
- Open Reading Frames
- Polymorphism, Single Nucleotide
- Promoter Regions, Genetic
- Sequence Analysis, DNA
- Transcriptome
Citations
This article has been cited 6 times.- Vaughn RN, Kochan KJ, Torres AK, Du M, Riley DG, Gill CA, Herring AD, Sanders JO, Riggs PK. Skeletal Muscle Expression of Actinin-3 (ACTN3) in Relation to Feed Efficiency Phenotype of F(2) Bos indicus - Bos taurus Steers. Front Genet 2022;13:796038.
- Samaha G, Wade CM, Mazrier H, Grueber CE, Haase B. Exploiting genomic synteny in Felidae: cross-species genome alignments and SNV discovery can aid conservation management. BMC Genomics 2021 Aug 6;22(1):601.
- Ropka-Molik K, Stefaniuk-Szmukier M, Musiał AD, Velie BD. The Genetics of Racing Performance in Arabian Horses. Int J Genomics 2019;2019:9013239.
- Stefaniuk-Szmukier M, Szmatoła T, Łątka J, Długosz B, Ropka-Molik K. The Blood and Muscle Expression Pattern of the Equine TCAP Gene during the Race Track Training of Arabian Horses. Animals (Basel) 2019 Aug 18;9(8).
- Jafari H, Abebe BK, Cong L, Ahmed Z, Zhaofei W, Sun M, Muhatai G, Chuzhao L, Dang R. Review: Genomic insights into the adaptive traits and stress resistance in modern horses. Stress Biol 2026 Jan 12;6(1):5.
- Myćka G, Ropka-Molik K, Cywińska A, Stefaniuk-Szmukier M. Endurance Effort Affected Expression of Actinin 3 and Klotho Different Isoforms Basing on the Arabian Horses Model. Genes (Basel) 2024 Dec 18;15(12).
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