Shape and joint angle data for seven European horse breeds and their repeatability.
Abstract: Conformation traits are important in the selection and distinction between horse breeds, but tend to be evaluated subjectively within a breed and cannot be compared between them. The horse shape space model, using a combination of 253 landmarks and semi-landmarks, provides objective information on the shape of a horse photographed from the side that can be compared between breeds. In this dataset, we are providing the full set of 253 landmarks for 1241 horses from seven breeds, including an R code file to extract joint angle information and transform the raw data into csv files for further analysis, such as breed comparisons, heritability or genome-wide association studies (single- or multibreed). The repeatability of the joint angles are also reported.
© 2024 The Authors. Published by Elsevier Inc.
Publication Date: 2024-08-03 PubMed ID: 39252769PubMed Central: PMC11381470DOI: 10.1016/j.dib.2024.110799Google Scholar: Lookup
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Summary
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The research provides a comprehensive set of data on the physical traits or landmarks of 1241 horses across seven European breeds. This data could help in the objective comparison between breeds for selection purposes and may further be used for breed comparison studies, heritability, and genome-wide association studies.
Background
- The paper emphasizes the importance of conformation traits in horses as these are fundamental in discerning and selecting between breeds. However, currently, these traits are often subjectively evaluated within a breed, making cross-breed comparisons difficult.
- The subjective method of evaluation has led to a need for objective methods to measure and compare horses of different breeds.
Methodology
- The researchers made use of a horse shape space model, which seizes the shape of a horse from a side photograph using 253 landmarks and semi-landmarks. This model serves as a tool to provide objective information on the form of a horse that can be used for comparing different breeds.
- The methodology involved gathering a full set of 253 landmark data for 1241 horses from seven different breeds. This comprehensive data is intended to offer an objective platform for comparison among these breeds while eliminating any potential subjectivity that can skew the results.
- The research also includes an R code file used to extract joint-angle information and transform the raw data into csv files. This transformed data can then be used for further analysis, such as breed comparisons, heritability, or genome-wide association studies, including either single or multi-breed studies.
Results and Conclusion
- The results were comprehensive, capturing a significant amount of data on horse physical traits, and were supported by a report on the repeatability of the joint angles.
- The dataset provided by the research serves as a valuable resource for understanding, comparing, and exploring horse breeds on a genomic level, with an emphasis on objectivity, repeatability, and scientific rigor.
Cite This Article
APA
Gmel AI, Lamas LP, Rosa TV, Stefaniuk-Szmukier M, Klecel W, Martin-Gimenez T, Cruz A, Weishaupt MA, Neuditschko M.
(2024).
Shape and joint angle data for seven European horse breeds and their repeatability.
Data Brief, 56, 110799.
https://doi.org/10.1016/j.dib.2024.110799 Publication
Researcher Affiliations
- Agroscope, Animal GenoPhenomics, Route de la Tioleyre 4, 1725 Posieux, Switzerland.
- Equine Department, Vetsuisse Faculty, University of Zurich, Winterthurerstrasse 260, 8053 Zurich, Switzerland.
- CIISA, Faculdade de Medicina Veterináriada Universidade de Lisboa, Lisboa, Portugal.
- CIISA, Faculdade de Medicina Veterináriada Universidade de Lisboa, Lisboa, Portugal.
- National Research Institute of Animal Production, University of Agriculture in Krakow, Krakow, Poland.
- Department of Animal Genetics and Conservation, Institute of Animal Sciences, Warsaw University of Life Sciences, Warsaw, Poland.
- Klinik für Pferdechirurgie und Orthopädie, Justus-Liebig Universität Giessen, Frankfurterstrasse 108, 39352 Giessen, Germany.
- Universidad de Zaragoza, Zaragoza, Spain.
- Equine Department, Vetsuisse Faculty, University of Zurich, Winterthurerstrasse 260, 8053 Zurich, Switzerland.
- Agroscope, Animal GenoPhenomics, Route de la Tioleyre 4, 1725 Posieux, Switzerland.
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