The microbial community associated with Parascaris spp. infecting juvenile horses.
Abstract: Parasitic nematodes, including large roundworms colloquially known as ascarids, affect the health and well-being of livestock animals worldwide. The equine ascarids, Parascaris spp., are important parasites of juvenile horses and the first ascarids to develop widespread anthelmintic resistance. The microbiota has been shown to be an important factor in the fitness of many organisms, including parasitic nematodes, where endosymbiotic Wolbachia have been exploited for treatment of filariasis in humans. Methods: This study used short-read 16S rRNA sequences and Illumina sequencing to characterize and compare microbiota of whole worm small intestinal stages and microbiota of male and female intestines and gonads. Diversity metrics including alpha and beta diversity, and the differential abundance analyses DESeq2, ANCOM-BC, corncob, and metagenomeSeq were used for comparisons. Results: Alpha and beta diversity of whole worm microbiota did not differ significantly between groups, but Simpson alpha diversity was significantly different between female intestine (FI) and male gonad (MG) (P= 0.0018), and Shannon alpha diversity was significantly different between female and male gonads (P = 0.0130), FI and horse jejunum (HJ) (P = 0.0383), and FI and MG (P= 0.0001). Beta diversity (Fig. 2B) was significantly different between female and male gonads (P = 0.0006), male intestine (MI) and FG (P = 0.0093), and MG and FI (P = 0.0041). When comparing organs, Veillonella was differentially abundant for DESeq2 and ANCOM-BC (p < 0.0001), corncob (P = 0.0008), and metagenomeSeq (P = 0.0118), and Sarcina was differentially abundant across four methods (P < 0.0001). Finally, the microbiota of all individual Parascaris spp. specimens were compared to establish shared microbiota between groups. Conclusions: Overall, this study provided important information regarding the Parascaris spp. microbiota and provides a first step towards determining whether the microbiota may be a viable target for future parasite control options.
© 2022. The Author(s).
Publication Date: 2022-11-04 PubMed ID: 36333754PubMed Central: PMC9636743DOI: 10.1186/s13071-022-05533-yGoogle Scholar: Lookup
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- Journal Article
Summary
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The study investigates the microbial community associated with Parascaris spp., a parasitic roundworm that affects juvenile horses. Key findings from the examination of different parts of the worm’s body indicate that there’s significant variation in microbial diversity depending on the worm’s location, and that certain types of bacteria may be more prevalent in certain locations. The study hopes to open up potential paths for parasite control.
Research Methods
- The researchers utilized short-read 16S rRNA sequences and Illumina sequencing to characterize the microbiota, or the community of bacteria, in different parts of the Parasacris spp. worm.
- They evaluated bacteria in whole worm small intestinal stages as well as in male and female intestines and gonads—important regions for the worm’s reproduction and digestion.
- Different diversity metrics were used for comparisons, including alpha diversity (diversity within a particular area or ecosystem) and beta diversity (diversity between ecosystems). They also used four different statistical techniques for differential abundance analyses, which identify species or genes of significantly different abundance between two or more conditions.
Key Findings
- They found that there were significant differences in both alpha and beta diversity of the worm’s microbiota depending on the location. For instance, the Simpson alpha diversity was notably different between the female intestine and the male gonad, as was the Shannon alpha diversity between female and male gonads.
- Similarly, beta diversity varied greatly between male and female gonads, male intestine and female gonads, and male gonads and female intestine.
- They also discovered that specific types of bacteria, Veillonella and Sarcina, were differentially abundant across different organs, suggesting possible relationships or influences between these bacteria and the worm’s biology.
- Finally, they compared the microbiota of all individual Parascaris spp. specimens to identify common bacteria present across the different worms.
Implications
- This study contributes valuable knowledge about the microbiota of Parascaris spp., particularly the varying bacterial communities in different parts of the worm.
- Understanding these differences might provide important insights into the biology of these worms, such as how they parasitize their hosts, reproduce, and digest food.
- The variations in bacterial communities, especially the differential abundance of certain bacteria, may be exploited as potential targets for controlling these parasites in the future.
Cite This Article
APA
Cain JL, Norris JK, Ripley NE, Suri P, Finnerty CA, Gravatte HS, Nielsen MK.
(2022).
The microbial community associated with Parascaris spp. infecting juvenile horses.
Parasit Vectors, 15(1), 408.
https://doi.org/10.1186/s13071-022-05533-y Publication
Researcher Affiliations
- Maxwell H. Gluck Equine Research Center, University of Kentucky, Lexington, KY, USA. jennifer.cain@uky.edu.
- Maxwell H. Gluck Equine Research Center, University of Kentucky, Lexington, KY, USA.
- Maxwell H. Gluck Equine Research Center, University of Kentucky, Lexington, KY, USA.
- Maxwell H. Gluck Equine Research Center, University of Kentucky, Lexington, KY, USA.
- Maxwell H. Gluck Equine Research Center, University of Kentucky, Lexington, KY, USA.
- Maxwell H. Gluck Equine Research Center, University of Kentucky, Lexington, KY, USA.
- Maxwell H. Gluck Equine Research Center, University of Kentucky, Lexington, KY, USA.
MeSH Terms
- Humans
- Horses
- Animals
- Female
- Male
- Ascaridoidea / genetics
- Ascaridida Infections / veterinary
- RNA, Ribosomal, 16S / genetics
- Horse Diseases / parasitology
- Microbiota
- Feces / parasitology
Conflict of Interest Statement
The authors declare that they have no competing interests.
References
This article includes 162 references
Citations
This article has been cited 3 times.- Gentilini F, Ogundipe TG, Turba ME, Romagnoli N, Lambertini C, Pollera C, Cremonesi P, Stancampiano L. Beyond the host: Unveiling the independent microbiome of equine gastrointestinal nematodes. PLoS One 2026;21(2):e0339596.
- Cain JL, Norris JK, Swan MP, Nielsen MK. A diverse microbial community and common core microbiota associated with the gonad of female Parascaris spp. Parasitol Res 2023 Dec 18;123(1):56.
- Wang J, Chen Y, Li M, Xia S, Zhao K, Fan H, Ni J, Sun W, Jia X, Lai S. The effects of differential feeding on ileum development, digestive ability and health status of newborn calves. Front Vet Sci 2023;10:1255122.
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