Fourier-transform infrared spectroscopic studies on the coordination of the side-chain COO- groups to Ca2+ in equine lysozyme.
Abstract: Interactions between Ca2+ and the Asp side chains in the Ca2+-binding site of equine lysozyme were investigated by Fourier-transform infrared (FT-IR) spectroscopy. In the spectrum of equine lysozyme, the intensities of the bands at about 1595 cm-1 and 1578 cm-1 in the region of the COO antisymmetric stretches increased upon Ca2+ binding. In the region of the COO- symmetric stretches, the loss of intensity at about 1388 cm-1 and gains of intensities at about 1423 cm-1 and 1403 cm-1 were observed due to Ca2+ binding to equine lysozyme. The spectral changes for equine lysozyme indicate that the COO- groups of Asp85, Asp90 and Asp91 in the Ca2+-binding site coordinate to Ca2+ in the pseudo-bridging mode, where divalent metal cation is bound to one of the two oxygens in the COO- group and a water molecule is hydrogen bonded to the other oxygen. The results presented here provide further evidence for a high degree of similarity between Ca2+-binding lysozyme and alpha-lactalbumin. The effects of Ca2+ binding on the main-chain conformation of equine lysozyme were compared with those of bovine alpha-lactalbumin and hen egg-white lysozyme.
Publication Date: 1998-02-07 PubMed ID: 9431992DOI: 10.1111/j.1432-1033.1997.00072.xGoogle Scholar: Lookup
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- Journal Article
Summary
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The research investigates the interaction between calcium ions (Ca2+) and the Aspartic acid (Asp) side chains in the calcium-binding region of a horse protein, lysozyme, using Fourier-transform infrared spectroscopy. It shows that these interactions have specific spectral signatures and that these findings provide further evidence of a similarity between calcium-binding to lysozyme and another protein, alpha-lactalbumin.
Investigation technique
- The researchers used Fourier-transform infrared (FT-IR) spectroscopy, a technique that provides qualitative and quantitative data about how molecules absorb different frequencies of infrared light. These absorption patterns can be related to the types of chemical bonds and structures in the sample, thus offering clues about the interactions occurring.
Key Findings
- Upon binding with Ca2+, the infrared spectrum of the equine lysozyme displayed increased intensity at the band regions around 1595 cm-1 and 1578 cm-1, corresponding to the COO antisymmetric stretches. Additionally, there was a decrease in intensity at around 1388 cm-1 and gains at about 1423 cm-1 and 1403 cm-1, representing COO- symmetric stretches.
- The aspartic acid residues (Asp85, Asp90, and Asp91) in the Ca2+-binding site interact with the Ca2+ ions in a specific manner referred to as “pseudo-bridging” mode. In this mode, the Ca2+ ions attach to one of the two oxygen atoms of the COO- group, and at the same time, a water molecule forms a hydrogen bond with the other oxygen.
Comparison with other proteins
- The research also included a comparison of effects of Ca2+ binding on the main-chain conformation of equine lysozyme to those of bovine alpha-lactalbumin and hen egg-white lysozyme.
- This comparison revealed a high similarity between how Ca2+ binds to equine lysozyme and alpha-lactalbumin, which is another milk protein. These findings suggest potential shared functional elements between these two proteins at the structural level.
Cite This Article
APA
Mizuguchi M, Nara M, Ke Y, Kawano K, Hiraoki T, Nitta K.
(1998).
Fourier-transform infrared spectroscopic studies on the coordination of the side-chain COO- groups to Ca2+ in equine lysozyme.
Eur J Biochem, 250(1), 72-76.
https://doi.org/10.1111/j.1432-1033.1997.00072.x Publication
Researcher Affiliations
- Division of Biological Sciences, Graduate School of Science, Hokkaido University, Sapporo, Japan.
MeSH Terms
- Animals
- Binding Sites
- Calcium / chemistry
- Calcium / metabolism
- Calcium-Binding Proteins / chemistry
- Cattle
- Egg White
- Horses
- Hydrogen Bonding
- Lactalbumin / chemistry
- Lactalbumin / metabolism
- Muramidase / chemistry
- Muramidase / metabolism
- Protein Binding
- Protein Conformation
- Spectrophotometry
- Spectroscopy, Fourier Transform Infrared
- Water / chemistry
- Water / metabolism
Citations
This article has been cited 5 times.- Golestanzadeh M, Naeimi H. Palladium decorated on a new dendritic complex with nitrogen ligation grafted to graphene oxide: fabrication, characterization, and catalytic application.. RSC Adv 2019 Aug 29;9(47):27560-27573.
- Woods KN. The glassy state of crambin and the THz time scale protein-solvent fluctuations possibly related to protein function.. BMC Biophys 2014;7:8.
- Jones EM, Squier TC, Sacksteder CA. An altered mode of calcium coordination in methionine-oxidized calmodulin.. Biophys J 2008 Dec;95(11):5268-80.
- Ragoonanan V, Aksan A. Heterogeneity in desiccated solutions: implications for biostabilization.. Biophys J 2008 Mar 15;94(6):2212-27.
- Fahmy K, Merroun M, Pollmann K, Raff J, Savchuk O, Hennig C, Selenska-Pobell S. Secondary structure and Pd(II) coordination in S-layer proteins from Bacillus sphaericus studied by infrared and X-ray absorption spectroscopy.. Biophys J 2006 Aug 1;91(3):996-1007.
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