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Journal of equine veterinary science2026; 106047; doi: 10.1016/j.jevs.2026.106047

Impact of collagen supplementation on the fecal microbiome of young horses in training.

Abstract: Intense training in athletic foals may alter fecal microbiota, highlighting the need for nutritional strategies such as hydrolyzed collagen supplementation. Objective: This study aimed to evaluate the effects of dietary hydrolyzed collagen on the fecal microbiome of weanlings in training. Methods: Twenty Mangalarga Marchador foals (206 ± 18 kg; 7 ± 1 mo age) were assigned to two groups: a supplemented group (50 g/day of hydrolyzed collagen for 180 days) and a control group. A completely randomized design with repeated measures over time was used. Foals were exercised five consecutive days per week. Fecal samples (10 g) were collected every 90 days (D0, D90 and D180) and analyzed by next-generation sequencing of the 16S rRNA gene. Alpha diversity was assessed using Chao1, Shannon, and Simpson indices, while beta diversity was evaluated by Principal Coordinate Analysis. Beta diversity differences were tested using PERMANOVA, and differential abundance at the phylum and genus levels was analyzed using the Wilcoxon rank-sum test. Results: A significant treatment effect (P 0.05) between groups on alpha diversity. Conclusions: These results indicate that hydrolyzed collagen supplementation modulates the fecal microbiome of training young horses, reducing fibrolytic bacteria over time.
Publication Date: 2026-06-06 PubMed ID: 42252003DOI: 10.1016/j.jevs.2026.106047Google Scholar: Lookup
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  • Journal Article

Summary

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Overview

  • This study investigated how feeding hydrolyzed collagen supplements to young horses undergoing training affects their fecal microbiome composition over a six-month period.

Introduction and Background

  • Young athletic horses (foals) undergoing intense training may experience changes in their gut microbiota, which can impact their overall health and performance.
  • Maintaining a balanced and healthy gut microbiome is important for nutrient absorption, immune function, and exercise recovery in these animals.
  • Hydrolyzed collagen, a nutritional supplement, is hypothesized to influence the microbial community in the gut positively.

Objective

  • The main goal was to examine the effect of daily dietary hydrolyzed collagen supplementation on the fecal microbiome diversity and composition of young training horses over 180 days.

Methods

  • Subjects: Twenty Mangalarga Marchador foals (~7 months old, average weight 206 ± 18 kg).
  • Experimental Design:
    • Randomized controlled design with two groups: supplemented (50 g/day hydrolyzed collagen) and control.
    • Duration: 180 days of supplementation during which foals underwent consistent training five days per week.
  • Sample Collection:
    • Fecal samples collected at baseline (Day 0), Day 90, and Day 180.
    • Samples weighed 10g and analyzed to study microbial populations.
  • Microbiome Analysis:
    • Next-generation sequencing targeting the 16S rRNA gene to identify bacterial taxa.
    • Alpha diversity (within sample diversity) assessed using Chao1, Shannon, and Simpson indices to measure richness and evenness.
    • Beta diversity (between sample diversity) analyzed by Principal Coordinate Analysis (PCoA) to visualize differences in microbial communities between groups and over time.
    • Differential abundance analysis conducted at the phylum and genus taxonomic levels using the Wilcoxon rank-sum test to detect significant changes in bacterial populations.
    • Statistical differences in beta diversity tested using PERMANOVA, a permutation-based multivariate analysis.

Results

  • No statistically significant differences were observed in alpha diversity indices between the supplemented and control groups; microbial richness and evenness remained relatively stable.
  • However, beta diversity analysis showed a significant effect of hydrolyzed collagen supplementation in altering the composition of the fecal microbiome over time (P < 0.05).
  • Specifically, there was a notable reduction over time in fibrolytic bacteria (those that help break down fibrous plant material) in the supplemented group compared to controls.
  • This suggests collagen supplementation modulated the microbial community structure but did not drastically affect overall diversity metrics.

Conclusions

  • Hydrolyzed collagen supplementation in young training horses causes measurable shifts in fecal microbiome composition, specifically reducing bacteria involved in fiber degradation.
  • These microbial changes could relate to how collagen impacts nutrient processing or gut environment in foals during exercise training.
  • The findings highlight the potential for targeted nutritional strategies like collagen supplementation to modulate gut microbiota dynamics in developing athletic horses.
  • Further research is needed to understand the functional implications of reduced fibrolytic bacteria and to optimize supplementation practices for equine health and performance.

Cite This Article

APA
Júnior AMCA, da Silva AH, Buroxid RP, Padovan JR, Nunes AT, Poleti MD, Fukumasu H, Gobesso AAO. (2026). Impact of collagen supplementation on the fecal microbiome of young horses in training. J Equine Vet Sci, 106047. https://doi.org/10.1016/j.jevs.2026.106047

Publication

ISSN: 0737-0806
NlmUniqueID: 8216840
Country: United States
Language: English
Pages: 106047
PII: S0737-0806(26)00282-0

Researcher Affiliations

Júnior, A M C Araújo
  • Department of Nutrition and Animal Production, School of Veterinary Medicine and Animal Science, University of São Paulo, Av. Duque de Caxias Norte, 225, Pirassununga, SP, 13635-900, Brazil. Electronic address: angeloaraujovet@gmail.com.
da Silva, A H
  • Department of Nutrition and Animal Production, School of Veterinary Medicine and Animal Science, University of São Paulo, Av. Duque de Caxias Norte, 225, Pirassununga, SP, 13635-900, Brazil.
Buroxid, R P
  • Department of Nutrition and Animal Production, School of Veterinary Medicine and Animal Science, University of São Paulo, Av. Duque de Caxias Norte, 225, Pirassununga, SP, 13635-900, Brazil.
Padovan, J R
  • Department of Nutrition and Animal Production, School of Veterinary Medicine and Animal Science, University of São Paulo, Av. Duque de Caxias Norte, 225, Pirassununga, SP, 13635-900, Brazil.
Nunes, A T
  • Department of Oncology, Faculty of Animal Science and Food Engineering, University of São Paulo, Av. Duque de Caxias Norte, 225, Pirassununga, SP, 13635-900, Brazil.
Poleti, M D
  • Department of Oncology, Faculty of Animal Science and Food Engineering, University of São Paulo, Av. Duque de Caxias Norte, 225, Pirassununga, SP, 13635-900, Brazil.
Fukumasu, H
  • Department of Oncology, Faculty of Animal Science and Food Engineering, University of São Paulo, Av. Duque de Caxias Norte, 225, Pirassununga, SP, 13635-900, Brazil.
Gobesso, A A O
  • Department of Nutrition and Animal Production, School of Veterinary Medicine and Animal Science, University of São Paulo, Av. Duque de Caxias Norte, 225, Pirassununga, SP, 13635-900, Brazil.

Conflict of Interest Statement

Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.

Citations

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