Molecular characterization of the re-emerging West Nile virus in avian species and equids in Israel, 2018, and pathological description of the disease.
Abstract: In this report we describe the molecular and pathological characteristics of West Nile virus (WNV) infection that occurred during the summer and fall of 2018 in avian species and equines. WNV is reported in Israel since the 1950s, with occasional outbreaks leading to significant morbidity and mortality in birds, high infection in horses and humans, and sporadic fatalities in humans. Methods: Animal and avian carcasses in a suitable condition were examined by post-mortem analysis. Tissue samples were examined for WNV by RT-qPCR and the viral load was quantified. Samples with sufficient material quality were further analyzed by Endpoint PCR and sequencing, which was used for phylogenetic analysis. Tissue samples from positive animals were used for culturing the virus in Vero and C6/36 cells. Results: WNV RNA was detected in one yellow-legged gull (Larus michahellis), two long-eared owls (Asio otus), two domesticated geese (Anser anser), one pheasant (Phasianus colchicus), four hooded crows (Corvus cornix), three horses and one donkey. Pathological and histopathological findings were characteristic of viral infection. Molecular analysis and viral load quantification showed varying degrees of infection, ranging between 70-1.4 × 10 target copies per sample. Phylogenetic analysis of a 906-bp genomic segment showed that all samples belonged to Lineage 1 clade 1a, with the following partition: five samples from 2018 and one sample detected in 2016 were of Cluster 2 Eastern European, two of Cluster 2 Mediterranean and four of Cluster 4. Four of the positive samples was successfully propagated in C6/36 and Vero cell lines for further work. Conclusions: WNV is constantly circulating in wild and domesticated birds and animals in Israel, necessitating constant surveillance in birds and equines. At least three WNV strains were circulating in the suspected birds and animals examined. Quantitative analysis showed that the viral load varies significantly between different organs and tissues of the infected animals.
Publication Date: 2020-10-22 PubMed ID: 33092614PubMed Central: PMC7579921DOI: 10.1186/s13071-020-04399-2Google Scholar: Lookup
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Summary
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The research article presents a detailed study of the molecular and pathological characteristics associated with West Nile virus (WNV) infection in birds and equines in Israel during the summer and fall of 2018.
Research Methodology
- The researchers examined avian and animal carcasses that were in suitable condition for post-mortem analysis.
- Tissue samples extracted from these carcasses were tested for presence of WNV using RT-qPCR method.
- The viral load in the tissue samples, if any, was quantified.
- Further, Endpoint PCR and sequencing was done on samples that had sufficient material quality. The results were used for conducting a phylogenetic analysis.
- Tissue samples from animals testing positive for WNV were used for culturing the virus in Vero and C6/36 cells.
Research Results
- WNV RNA was detected in various avian species including one yellow-legged gull, two long-eared owls, two domesticated geese, one pheasant, and four hooded crows. Additionally, the virus was found in three horses and one donkey.
- The pathological and histopathological findings from the study were characteristic of a viral infection.
- The molecular analysis and quantification showed varying degrees of infection, ranging from 70 to 1.4 × 10 target copies per sample.
- The phylogenetic analysis suggested that all the samples belonged to Lineage 1 clade 1a. The partition included five samples from 2018 and one sample from 2016 that were part of the Cluster 2 Eastern European group, two from the Cluster 2 Mediterranean group, and four from Cluster 4.
- Four successful virus cultures were produced in C6/36 and Vero cell lines from the samples that tested positive.
Research Conclusions
- The findings infer that the West Nile virus is constantly circulating in wild and domesticated birds and animals in Israel, leading to the conclusion that constant surveillance in birds and equines is necessary.
- At least three different strains of WNV were found to be circulating in the birds and animals that were suspected and examined.
- Quantitative analysis showed significant variation in the viral load between different organs and tissues of infected animals.
Cite This Article
APA
Schvartz G, Farnoushi Y, Berkowitz A, Edery N, Hahn S, Steinman A, Lublin A, Erster O.
(2020).
Molecular characterization of the re-emerging West Nile virus in avian species and equids in Israel, 2018, and pathological description of the disease.
Parasit Vectors, 13(1), 528.
https://doi.org/10.1186/s13071-020-04399-2 Publication
Researcher Affiliations
- Division of Virology, Kimron Veterinary Institute, Bet Dagan, Israel.
- Koret School of Veterinary Medicine, The Robert H. Smith, Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, 7610001, Rehovot, Israel.
- Division of Avian diseases, Kimron Veterinary Institute, Bet Dagan, Israel.
- Division of Avian diseases, Kimron Veterinary Institute, Bet Dagan, Israel.
- Division of Pathology, Kimron Veterinary Institute, Bet Dagan, Israel.
- Division of Pathology, Kimron Veterinary Institute, Bet Dagan, Israel.
- Koret School of Veterinary Medicine, The Robert H. Smith, Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, 7610001, Rehovot, Israel.
- Division of Avian diseases, Kimron Veterinary Institute, Bet Dagan, Israel. AvishaiL@moag.gov.il.
- Division of Virology, Kimron Veterinary Institute, Bet Dagan, Israel. oran.erster@sheba.health.gov.il.
- Central Virology Laboratory, Israel Ministry of Health, Sheba Medical Center, Ramat Gan, Israel. oran.erster@sheba.health.gov.il.
MeSH Terms
- Animals
- Animals, Wild / virology
- Autopsy
- Birds / virology
- Charadriiformes / virology
- Crows / virology
- Equidae / virology
- Geese / virology
- Genes, Viral
- Horses / virology
- Israel / epidemiology
- Livestock / virology
- Phylogeny
- Viral Load
- West Nile Fever / pathology
- West Nile Fever / transmission
- West Nile Fever / veterinary
- West Nile virus / genetics
- West Nile virus / isolation & purification
Grant Funding
- 33-04-0002 / Israli Ministry of Agriculture
Conflict of Interest Statement
The authors declare that they have no competing interests.
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